RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 LELP1Q5T871 98 aa11.55□□□□□ -0.56
SCAF11-206ENST00000474828 SUMO4Q6EEV6 95 aa11.55□□□□□ -0.56
SCAF11-206ENST00000474828 COMMD7Q86VX2 200 aa11.55□□□□□ -0.56
SCAF11-206ENST00000474828 RPL36ALQ969Q0 106 aaKnown RBP11.55□□□□□ -0.56
SCAF11-206ENST00000474828 DNAJC30Q96LL9 226 aa11.55□□□□□ -0.56
SCAF11-206ENST00000474828 SEC11CQ9BY50 192 aa11.55□□□□□ -0.56
SCAF11-206ENST00000474828 IGLV2-18A0A075B6J9 118 aa11.54□□□□□ -0.56
SCAF11-206ENST00000474828 A0A087WWC5 75 aa11.54□□□□□ -0.56
SCAF11-206ENST00000474828 PPP1R2P9O14990 202 aa11.54□□□□□ -0.56
SCAF11-206ENST00000474828 KRTAP1-5Q9BYS1 174 aa11.54□□□□□ -0.56
SCAF11-206ENST00000474828 TMEM191AQ9H0A3 160 aa11.54□□□□□ -0.56
SCAF11-206ENST00000474828 H7C1H1 209 aa11.53□□□□□ -0.56
SCAF11-206ENST00000474828 TTC32Q5I0X7 151 aa11.53□□□□□ -0.56
SCAF11-206ENST00000474828 ANAPC16Q96DE5 110 aa11.53□□□□□ -0.56
SCAF11-206ENST00000474828 F5H697 171 aa11.52□□□□□ -0.57
SCAF11-206ENST00000474828 RASL11AQ6T310 242 aa11.52□□□□□ -0.57
SCAF11-206ENST00000474828 WFDC10BQ8IUB3 73 aa11.52□□□□□ -0.57
SCAF11-206ENST00000474828 BORCS7Q96B45 105 aa11.52□□□□□ -0.57
SCAF11-206ENST00000474828 A0A1B0GW15 77 aa11.51□□□□□ -0.57
SCAF11-206ENST00000474828 RIGQ13278 110 aa11.51□□□□□ -0.57
SCAF11-206ENST00000474828 LINC01556Q5JQF7 62 aa11.51□□□□□ -0.57
SCAF11-206ENST00000474828 SMIM15Q7Z3B0 74 aa11.51□□□□□ -0.57
SCAF11-206ENST00000474828 GATD1Q8NB37 220 aa11.51□□□□□ -0.57
SCAF11-206ENST00000474828 NIT2Q9NQR4 276 aa11.51□□□□□ -0.57
SCAF11-206ENST00000474828 A0A1B0GXF2 115 aa11.5□□□□□ -0.57
SCAF11-206ENST00000474828 F8W036 122 aa11.5□□□□□ -0.57
SCAF11-206ENST00000474828 M0R2N4 97 aa11.5□□□□□ -0.57
SCAF11-206ENST00000474828 RTL8CO15255 209 aa11.5□□□□□ -0.57
SCAF11-206ENST00000474828 MT-ND4LP03901 98 aa11.5□□□□□ -0.57
SCAF11-206ENST00000474828 MGPP08493 103 aa11.5□□□□□ -0.57
SCAF11-206ENST00000474828 DAZ4Q86SG3 579 aaKnown RBP11.5□□□□□ -0.57
SCAF11-206ENST00000474828 RNF185Q96GF1 192 aa11.5□□□□□ -0.57
SCAF11-206ENST00000474828 DAZ3Q9NR90 486 aaKnown RBP11.5□□□□□ -0.57
SCAF11-206ENST00000474828 CARHSP1Q9Y2V2 147 aaKnown RBP11.5□□□□□ -0.57
SCAF11-206ENST00000474828 HECTD4Q9Y4D8 3996 aa11.49□□□□□ -0.57
SCAF11-206ENST00000474828 TRAV8-6A0A0B4J262 113 aa11.49□□□□□ -0.57
SCAF11-206ENST00000474828 IGHV3-38A0A0C4DH36 116 aa11.49□□□□□ -0.57
SCAF11-206ENST00000474828 TRBV6-5A0A0K0K1A5 114 aa11.48□□□□□ -0.57
SCAF11-206ENST00000474828 RAB4AP20338 218 aa11.48□□□□□ -0.57
SCAF11-206ENST00000474828 LINC00336Q6ZUF6 198 aa11.48□□□□□ -0.57
SCAF11-206ENST00000474828 IMMP2LQ96T52 175 aa11.48□□□□□ -0.57
SCAF11-206ENST00000474828 PKD1P98161 4303 aa11.47□□□□□ -0.57
SCAF11-206ENST00000474828 TRBV6-8A0A0A6YYG3 113 aa11.47□□□□□ -0.57
SCAF11-206ENST00000474828 TMEM97Q5BJF2 176 aa11.47□□□□□ -0.57
SCAF11-206ENST00000474828 C1orf134Q5TEV5 83 aa11.47□□□□□ -0.57
SCAF11-206ENST00000474828 NTM-AS1Q6ZSK4 140 aa11.47□□□□□ -0.57
SCAF11-206ENST00000474828 ATP5L2Q7Z4Y8 100 aa11.47□□□□□ -0.57
SCAF11-206ENST00000474828 TRAV9-2A0A087WT02 112 aa11.46□□□□□ -0.57
SCAF11-206ENST00000474828 OR10J3Q5JRS4 329 aa11.46□□□□□ -0.57
SCAF11-206ENST00000474828 C6orf223Q8N319 242 aa11.46□□□□□ -0.57
SCAF11-206ENST00000474828 MRAP2Q96G30 205 aa11.46□□□□□ -0.57
SCAF11-206ENST00000474828 CTDSP1Q9GZU7 261 aa11.46□□□□□ -0.57
SCAF11-206ENST00000474828 TMEM242Q9NWH2 141 aa11.46□□□□□ -0.57
SCAF11-206ENST00000474828 TNFRSF18Q9Y5U5 241 aa11.46□□□□□ -0.57
SCAF11-206ENST00000474828 TRAV26-2A0A0B4J265 109 aa11.45□□□□□ -0.58
SCAF11-206ENST00000474828 FAM104BQ5XKR9 115 aa11.45□□□□□ -0.58
SCAF11-206ENST00000474828 Q6ZRN7 208 aaPredicted RBP11.45□□□□□ -0.58
SCAF11-206ENST00000474828 C10orf126Q8N4M7 172 aa11.45□□□□□ -0.58
SCAF11-206ENST00000474828 CHCHD7Q9BUK0 85 aa11.45□□□□□ -0.58
SCAF11-206ENST00000474828 S100A8P05109 93 aa11.44□□□□□ -0.58
SCAF11-206ENST00000474828 HBBP68871 147 aa11.44□□□□□ -0.58
SCAF11-206ENST00000474828 IQCJQ1A5X6 159 aa11.44□□□□□ -0.58
SCAF11-206ENST00000474828 NIT1Q86X76 327 aa11.44□□□□□ -0.58
SCAF11-206ENST00000474828 AMN1Q8IY45 258 aa11.44□□□□□ -0.58
SCAF11-206ENST00000474828 DNAH11Q96DT5 4516 aa11.44□□□□□ -0.58
SCAF11-206ENST00000474828 IBA57-AS1B1ANH7 110 aa11.43□□□□□ -0.58
SCAF11-206ENST00000474828 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.43□□□□□ -0.58
SCAF11-206ENST00000474828 GAS8-AS1O95177 125 aa11.42□□□□□ -0.58
SCAF11-206ENST00000474828 LAGE3Q14657 143 aa11.42□□□□□ -0.58
SCAF11-206ENST00000474828 RPL39LQ96EH5 51 aaKnown RBP11.42□□□□□ -0.58
SCAF11-206ENST00000474828 TRAV9-1A0A075B6T8 112 aa11.41□□□□□ -0.58
SCAF11-206ENST00000474828 CAMPP49913 170 aa11.41□□□□□ -0.58
SCAF11-206ENST00000474828 POLR2KP53803 58 aaKnown RBP11.41□□□□□ -0.58
SCAF11-206ENST00000474828 NRACQ8N912 160 aa11.41□□□□□ -0.58
SCAF11-206ENST00000474828 TRBV24-1A0A075B6N3 115 aa11.4□□□□□ -0.58
SCAF11-206ENST00000474828 A0A1B0GVY2 172 aa11.4□□□□□ -0.58
SCAF11-206ENST00000474828 PPP1R17O96001 155 aa11.4□□□□□ -0.58
SCAF11-206ENST00000474828 RPS10P46783 165 aaKnown RBP11.4□□□□□ -0.58
SCAF11-206ENST00000474828 RHEBQ15382 184 aa11.4□□□□□ -0.58
SCAF11-206ENST00000474828 MRPL51Q4U2R6 128 aaKnown RBP11.4□□□□□ -0.58
SCAF11-206ENST00000474828 MRPL54Q6P161 138 aaKnown RBP11.4□□□□□ -0.58
SCAF11-206ENST00000474828 CLRN3Q8NCR9 226 aa11.4□□□□□ -0.58
SCAF11-206ENST00000474828 BTF3L4Q96K17 158 aa11.4□□□□□ -0.58
SCAF11-206ENST00000474828 TRBV27A0A0K0K1C4 114 aa11.39□□□□□ -0.59
SCAF11-206ENST00000474828 C7orf77A4D0Y5 90 aa11.39□□□□□ -0.59
SCAF11-206ENST00000474828 SDHAF1A6NFY7 115 aa11.39□□□□□ -0.59
SCAF11-206ENST00000474828 NCR2O95944 276 aa11.39□□□□□ -0.59
SCAF11-206ENST00000474828 PKIAP61925 76 aa11.39□□□□□ -0.59
SCAF11-206ENST00000474828 NFE4Q86UQ8 179 aa11.39□□□□□ -0.59
SCAF11-206ENST00000474828 Q8N3U1 123 aa11.39□□□□□ -0.59
SCAF11-206ENST00000474828 TMEM70Q9BUB7 260 aa11.39□□□□□ -0.59
SCAF11-206ENST00000474828 TRBV25-1A0A075B6N4 114 aa11.38□□□□□ -0.59
SCAF11-206ENST00000474828 IGHV1-24A0A0C4DH33 117 aa11.38□□□□□ -0.59
SCAF11-206ENST00000474828 RPL32P62910 135 aaKnown RBP11.38□□□□□ -0.59
SCAF11-206ENST00000474828 KCNIP4Q6PIL6 250 aa11.38□□□□□ -0.59
SCAF11-206ENST00000474828 PRSS29PA6NIE9 313 aa11.37□□□□□ -0.59
SCAF11-206ENST00000474828 PPBPP02775 128 aa11.37□□□□□ -0.59
SCAF11-206ENST00000474828 PHOX2AO14813 284 aa11.36□□□□□ -0.59
SCAF11-206ENST00000474828 IGHV3-30P01768 117 aa11.36□□□□□ -0.59
SCAF11-206ENST00000474828 IGHV3-33P01772 117 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms