RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 TRBV7-3A0A075B6L6 115 aa5.76□□□□□ -1.49
TNFRSF9-202ENST00000474475 IGKV2D-24A0A075B6R9 120 aa5.76□□□□□ -1.49
TNFRSF9-202ENST00000474475 TRBV10-1A0A0K0K1A3 114 aa5.76□□□□□ -1.49
TNFRSF9-202ENST00000474475 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
TNFRSF9-202ENST00000474475 SEC11BP0C7V7 166 aa5.76□□□□□ -1.49
TNFRSF9-202ENST00000474475 RPL36AP83881 106 aaKnown RBP5.76□□□□□ -1.49
TNFRSF9-202ENST00000474475 ZNF345Q14585 488 aa5.76□□□□□ -1.49
TNFRSF9-202ENST00000474475 OR10G8Q8NGN5 311 aa5.76□□□□□ -1.49
TNFRSF9-202ENST00000474475 FAM213BQ8TBF2 198 aa5.76□□□□□ -1.49
TNFRSF9-202ENST00000474475 RPL36ALQ969Q0 106 aaKnown RBP5.76□□□□□ -1.49
TNFRSF9-202ENST00000474475 MLST8Q9BVC4 326 aa5.76□□□□□ -1.49
TNFRSF9-202ENST00000474475 COX11Q9Y6N1 276 aa5.76□□□□□ -1.49
TNFRSF9-202ENST00000474475 VPS13BQ7Z7G8 4022 aa5.76□□□□□ -1.49
TNFRSF9-202ENST00000474475 A0A087WX48 190 aa5.75□□□□□ -1.49
TNFRSF9-202ENST00000474475 MUC21A0A0G2JKD1 596 aa5.75□□□□□ -1.49
TNFRSF9-202ENST00000474475 MUC21A0A140T8X8 626 aa5.75□□□□□ -1.49
TNFRSF9-202ENST00000474475 UMAD1C9J7I0 102 aa5.75□□□□□ -1.49
TNFRSF9-202ENST00000474475 S100A9P06702 114 aaKnown RBP5.75□□□□□ -1.49
TNFRSF9-202ENST00000474475 CXCL1P09341 107 aa5.75□□□□□ -1.49
TNFRSF9-202ENST00000474475 RAB4BP61018 213 aa5.75□□□□□ -1.49
TNFRSF9-202ENST00000474475 PRR27Q6MZM9 219 aa5.75□□□□□ -1.49
TNFRSF9-202ENST00000474475 ATRAIDQ6UW56 229 aa5.75□□□□□ -1.49
TNFRSF9-202ENST00000474475 UBE2WQ96B02 151 aa5.75□□□□□ -1.49
TNFRSF9-202ENST00000474475 RMI2Q96E14 147 aa5.75□□□□□ -1.49
TNFRSF9-202ENST00000474475 CHCHD7Q9BUK0 85 aa5.75□□□□□ -1.49
TNFRSF9-202ENST00000474475 FLG2Q5D862 2391 aaPredicted RBP5.74□□□□□ -1.49
TNFRSF9-202ENST00000474475 TRBV6-8A0A0A6YYG3 113 aa5.74□□□□□ -1.49
TNFRSF9-202ENST00000474475 RBFOX3A6NFN3 312 aa5.74□□□□□ -1.49
TNFRSF9-202ENST00000474475 HMSDA8MTL9 139 aa5.74□□□□□ -1.49
TNFRSF9-202ENST00000474475 BCL2L11O43521 198 aa5.74□□□□□ -1.49
TNFRSF9-202ENST00000474475 SNAI2O43623 268 aa5.74□□□□□ -1.49
TNFRSF9-202ENST00000474475 PFDN1O60925 122 aa5.74□□□□□ -1.49
TNFRSF9-202ENST00000474475 ELOBQ15370 118 aa5.74□□□□□ -1.49
TNFRSF9-202ENST00000474475 ZNF56Q15929 161 aa5.74□□□□□ -1.49
TNFRSF9-202ENST00000474475 BAGE2Q86Y30 109 aa5.74□□□□□ -1.49
TNFRSF9-202ENST00000474475 Q8N976 141 aa5.74□□□□□ -1.49
TNFRSF9-202ENST00000474475 NEXN-AS1Q8NBZ9 246 aa5.74□□□□□ -1.49
TNFRSF9-202ENST00000474475 ZNF471Q9BX82 626 aaPredicted RBP5.74□□□□□ -1.49
TNFRSF9-202ENST00000474475 DNAH8Q96JB1 4490 aa5.74□□□□□ -1.49
TNFRSF9-202ENST00000474475 SRRM2Q9UQ35 2752 aaKnown RBP5.73□□□□□ -1.49
TNFRSF9-202ENST00000474475 A0A0D9SG52 128 aa5.73□□□□□ -1.49
TNFRSF9-202ENST00000474475 KANTRA0A1W2PQU2 76 aa5.73□□□□□ -1.49
TNFRSF9-202ENST00000474475 OR5AL1P0C617 328 aa5.73□□□□□ -1.49
TNFRSF9-202ENST00000474475 SSTP61278 116 aa5.73□□□□□ -1.49
TNFRSF9-202ENST00000474475 MPV17L2Q567V2 206 aa5.73□□□□□ -1.49
TNFRSF9-202ENST00000474475 ENHOQ6UWT2 76 aa5.73□□□□□ -1.49
TNFRSF9-202ENST00000474475 TMUB2Q71RG4 321 aa5.73□□□□□ -1.49
TNFRSF9-202ENST00000474475 SCXQ7RTU7 201 aa5.73□□□□□ -1.49
TNFRSF9-202ENST00000474475 KIF25-AS1Q9Y6Z4 181 aa5.73□□□□□ -1.49
TNFRSF9-202ENST00000474475 TMEM262E9PQX1 116 aa5.72□□□□□ -1.49
TNFRSF9-202ENST00000474475 RPL35P42766 123 aaKnown RBP5.72□□□□□ -1.49
TNFRSF9-202ENST00000474475 CCL20P78556 96 aa5.72□□□□□ -1.49
TNFRSF9-202ENST00000474475 Q0VG73 95 aa5.72□□□□□ -1.49
TNFRSF9-202ENST00000474475 SPANXN1Q5VSR9 72 aa5.72□□□□□ -1.49
TNFRSF9-202ENST00000474475 KCNIP4Q6PIL6 250 aa5.72□□□□□ -1.49
TNFRSF9-202ENST00000474475 NTM-AS1Q6ZSK4 140 aa5.72□□□□□ -1.49
TNFRSF9-202ENST00000474475 C15orf54Q8N8G6 183 aa5.72□□□□□ -1.49
TNFRSF9-202ENST00000474475 DERL1Q9BUN8 251 aa5.72□□□□□ -1.49
TNFRSF9-202ENST00000474475 KRTAP3-1Q9BYR8 98 aa5.72□□□□□ -1.49
TNFRSF9-202ENST00000474475 F5H697 171 aa5.71□□□□□ -1.5
TNFRSF9-202ENST00000474475 MALP21145 153 aa5.71□□□□□ -1.5
TNFRSF9-202ENST00000474475 C11orf52Q96A22 123 aa5.71□□□□□ -1.5
TNFRSF9-202ENST00000474475 CHCHD5Q9BSY4 110 aa5.71□□□□□ -1.5
TNFRSF9-202ENST00000474475 CHAC1Q9BUX1 264 aa5.71□□□□□ -1.5
TNFRSF9-202ENST00000474475 C1orf43Q9BWL3 253 aa5.71□□□□□ -1.5
TNFRSF9-202ENST00000474475 GNG13Q9P2W3 67 aa5.71□□□□□ -1.5
TNFRSF9-202ENST00000474475 VAX2Q9UIW0 290 aa5.71□□□□□ -1.5
TNFRSF9-202ENST00000474475 MYCBP2O75592 4640 aa5.71□□□□□ -1.5
TNFRSF9-202ENST00000474475 IGLV2-8P01709 118 aa5.7□□□□□ -1.5
TNFRSF9-202ENST00000474475 CRPP02741 224 aa5.7□□□□□ -1.5
TNFRSF9-202ENST00000474475 ANGP03950 147 aaKnown RBP5.7□□□□□ -1.5
TNFRSF9-202ENST00000474475 IGLC6P0CF74 106 aa5.7□□□□□ -1.5
TNFRSF9-202ENST00000474475 GZMBP10144 247 aa5.7□□□□□ -1.5
TNFRSF9-202ENST00000474475 KRTAP10-4P60372 401 aaPredicted RBP5.7□□□□□ -1.5
TNFRSF9-202ENST00000474475 EIF5AP63241 154 aaKnown RBP5.7□□□□□ -1.5
TNFRSF9-202ENST00000474475 CENPWQ5EE01 88 aa5.7□□□□□ -1.5
TNFRSF9-202ENST00000474475 CIRBP-AS1Q8TBR5 109 aa5.7□□□□□ -1.5
TNFRSF9-202ENST00000474475 MANBALQ9NQG1 85 aa5.7□□□□□ -1.5
TNFRSF9-202ENST00000474475 TRAV1-1A0A0B4J248 108 aa5.69□□□□□ -1.5
TNFRSF9-202ENST00000474475 RAB19A4D1S5 217 aa5.69□□□□□ -1.5
TNFRSF9-202ENST00000474475 USP17L23D6RBM5 183 aa5.69□□□□□ -1.5
TNFRSF9-202ENST00000474475 HLA-DQA1P01909 254 aa5.69□□□□□ -1.5
TNFRSF9-202ENST00000474475 SMIM17P0DL12 118 aa5.69□□□□□ -1.5
TNFRSF9-202ENST00000474475 RBX1P62877 108 aa5.69□□□□□ -1.5
TNFRSF9-202ENST00000474475 GAGE6Q13070 117 aa5.69□□□□□ -1.5
TNFRSF9-202ENST00000474475 MIAQ16674 131 aa5.69□□□□□ -1.5
TNFRSF9-202ENST00000474475 C14orf177Q52M58 125 aa5.69□□□□□ -1.5
TNFRSF9-202ENST00000474475 KRTAP26-1Q6PEX3 210 aa5.69□□□□□ -1.5
TNFRSF9-202ENST00000474475 DEFB104AQ8WTQ1 72 aa5.69□□□□□ -1.5
TNFRSF9-202ENST00000474475 AP1S3Q96PC3 154 aa5.69□□□□□ -1.5
TNFRSF9-202ENST00000474475 TPPP3Q9BW30 176 aa5.69□□□□□ -1.5
TNFRSF9-202ENST00000474475 PRR34Q9NV39 138 aa5.69□□□□□ -1.5
TNFRSF9-202ENST00000474475 C19orf71A6NCJ1 209 aa5.68□□□□□ -1.5
TNFRSF9-202ENST00000474475 KRTAP29-1A8MX34 341 aaPredicted RBP5.68□□□□□ -1.5
TNFRSF9-202ENST00000474475 M0QY20 66 aa5.68□□□□□ -1.5
TNFRSF9-202ENST00000474475 PRSS1P07477 247 aa5.68□□□□□ -1.5
TNFRSF9-202ENST00000474475 MGPP08493 103 aa5.68□□□□□ -1.5
TNFRSF9-202ENST00000474475 PKIAP61925 76 aa5.68□□□□□ -1.5
TNFRSF9-202ENST00000474475 TMEM97Q5BJF2 176 aa5.68□□□□□ -1.5
TNFRSF9-202ENST00000474475 SUMO4Q6EEV6 95 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms