RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 SIRPDQ9H106 197 aa10.94□□□□□ -0.66
SAMM50-203ENST00000474323 FAM240AA0A1B0GVK7 77 aa10.93□□□□□ -0.66
SAMM50-203ENST00000474323 ZNF561-AS1K7EIQ3 104 aa10.93□□□□□ -0.66
SAMM50-203ENST00000474323 LEPROTO15243 131 aa10.93□□□□□ -0.66
SAMM50-203ENST00000474323 IGHV4-39P01824 125 aa10.93□□□□□ -0.66
SAMM50-203ENST00000474323 ELANEP08246 267 aa10.93□□□□□ -0.66
SAMM50-203ENST00000474323 C15orf32Q32M92 178 aa10.93□□□□□ -0.66
SAMM50-203ENST00000474323 POLR2KP53803 58 aaKnown RBP10.92□□□□□ -0.66
SAMM50-203ENST00000474323 LINC00477Q96M19 166 aa10.92□□□□□ -0.66
SAMM50-203ENST00000474323 CHD6Q8TD26 2715 aa10.92□□□□□ -0.66
SAMM50-203ENST00000474323 VPS13CQ709C8 3753 aa10.92□□□□□ -0.66
SAMM50-203ENST00000474323 VCYO14598 125 aa10.92□□□□□ -0.66
SAMM50-203ENST00000474323 SPRY2O43597 315 aa10.92□□□□□ -0.66
SAMM50-203ENST00000474323 ZNF843Q8N446 348 aa10.92□□□□□ -0.66
SAMM50-203ENST00000474323 METTL26Q96S19 204 aa10.92□□□□□ -0.66
SAMM50-203ENST00000474323 SVEP1Q4LDE5 3571 aa10.92□□□□□ -0.66
SAMM50-203ENST00000474323 EDN2P20800 178 aa10.91□□□□□ -0.66
SAMM50-203ENST00000474323 C2orf82Q6UX34 121 aa10.91□□□□□ -0.66
SAMM50-203ENST00000474323 ZFAND2AQ8N6M9 145 aa10.91□□□□□ -0.66
SAMM50-203ENST00000474323 IGHV3OR16-13A0A075B7E8 117 aa10.91□□□□□ -0.66
SAMM50-203ENST00000474323 IGHV3-74A0A0B4J1X5 117 aa10.91□□□□□ -0.66
SAMM50-203ENST00000474323 H3BT86 120 aa10.91□□□□□ -0.66
SAMM50-203ENST00000474323 RPL39P62891 51 aaKnown RBP10.91□□□□□ -0.66
SAMM50-203ENST00000474323 KLK9Q2XQG4 91 aa10.91□□□□□ -0.66
SAMM50-203ENST00000474323 Q8N6K4 173 aa10.91□□□□□ -0.66
SAMM50-203ENST00000474323 C16orf92Q96LL3 132 aa10.91□□□□□ -0.66
SAMM50-203ENST00000474323 KLK9Q9UKQ9 250 aa10.91□□□□□ -0.66
SAMM50-203ENST00000474323 IGHV7-81A0A0B4J1V7 117 aa10.9□□□□□ -0.66
SAMM50-203ENST00000474323 A0A0J9YX75 114 aa10.9□□□□□ -0.66
SAMM50-203ENST00000474323 ODF3BA8MYP8 253 aa10.9□□□□□ -0.66
SAMM50-203ENST00000474323 M0R2P5 195 aa10.9□□□□□ -0.66
SAMM50-203ENST00000474323 FAM110DQ8TAY7 271 aaPredicted RBP10.9□□□□□ -0.66
SAMM50-203ENST00000474323 TRBV7-7A0A0K0K1E9 115 aa10.9□□□□□ -0.66
SAMM50-203ENST00000474323 TMEM223A0PJW6 202 aa10.9□□□□□ -0.66
SAMM50-203ENST00000474323 TRIAP1O43715 76 aa10.9□□□□□ -0.66
SAMM50-203ENST00000474323 IGF1P05019 195 aa10.9□□□□□ -0.66
SAMM50-203ENST00000474323 U3KQE9 123 aa10.9□□□□□ -0.66
SAMM50-203ENST00000474323 SDHAF1A6NFY7 115 aa10.89□□□□□ -0.67
SAMM50-203ENST00000474323 EBI3Q14213 229 aa10.89□□□□□ -0.67
SAMM50-203ENST00000474323 DEFB121Q5J5C9 76 aa10.89□□□□□ -0.67
SAMM50-203ENST00000474323 C9orf139Q6ZV77 190 aa10.89□□□□□ -0.67
SAMM50-203ENST00000474323 H7C423 109 aa10.89□□□□□ -0.67
SAMM50-203ENST00000474323 LINC00315P59091 139 aa10.89□□□□□ -0.67
SAMM50-203ENST00000474323 KIF25-AS1Q9Y6Z4 181 aa10.89□□□□□ -0.67
SAMM50-203ENST00000474323 NXPH4O95158 308 aa10.88□□□□□ -0.67
SAMM50-203ENST00000474323 RNASE3P12724 160 aaKnown RBP10.88□□□□□ -0.67
SAMM50-203ENST00000474323 BEX4Q9NWD9 120 aaPredicted RBP10.88□□□□□ -0.67
SAMM50-203ENST00000474323 IGHV3-49A0A0A0MS15 119 aa10.88□□□□□ -0.67
SAMM50-203ENST00000474323 ZNF56Q15929 161 aa10.88□□□□□ -0.67
SAMM50-203ENST00000474323 CLEC19AQ6UXS0 136 aa10.88□□□□□ -0.67
SAMM50-203ENST00000474323 LINC01587Q99440 93 aa10.88□□□□□ -0.67
SAMM50-203ENST00000474323 CHCHD5Q9BSY4 110 aa10.88□□□□□ -0.67
SAMM50-203ENST00000474323 VPREB3Q9UKI3 123 aa10.88□□□□□ -0.67
SAMM50-203ENST00000474323 CELSR2Q9HCU4 2923 aa10.87□□□□□ -0.67
SAMM50-203ENST00000474323 M0R1W7 72 aa10.87□□□□□ -0.67
SAMM50-203ENST00000474323 IGHV1-69P01742 117 aa10.87□□□□□ -0.67
SAMM50-203ENST00000474323 COX6CP09669 75 aa10.87□□□□□ -0.67
SAMM50-203ENST00000474323 CCDC140Q96MF4 163 aa10.87□□□□□ -0.67
SAMM50-203ENST00000474323 POLQO75417 2590 aa10.87□□□□□ -0.67
SAMM50-203ENST00000474323 OOSP1A8MZH6 123 aa10.87□□□□□ -0.67
SAMM50-203ENST00000474323 C20orf173Q96LM9 149 aa10.87□□□□□ -0.67
SAMM50-203ENST00000474323 SPANXDQ9BXN6 97 aa10.87□□□□□ -0.67
SAMM50-203ENST00000474323 TRBV27A0A0K0K1C4 114 aa10.86□□□□□ -0.67
SAMM50-203ENST00000474323 OVOL1O14753 267 aa10.86□□□□□ -0.67
SAMM50-203ENST00000474323 GNRH2O43555 120 aa10.86□□□□□ -0.67
SAMM50-203ENST00000474323 IMUPQ9GZP8 106 aa10.86□□□□□ -0.67
SAMM50-203ENST00000474323 BPESC1Q9GZL8 116 aa10.85□□□□□ -0.67
SAMM50-203ENST00000474323 ICOSQ9Y6W8 199 aa10.85□□□□□ -0.67
SAMM50-203ENST00000474323 A0A0J9YXY3 114 aa10.85□□□□□ -0.67
SAMM50-203ENST00000474323 ZFP36P26651 326 aaKnown RBP10.85□□□□□ -0.67
SAMM50-203ENST00000474323 SUMO4Q6EEV6 95 aa10.85□□□□□ -0.67
SAMM50-203ENST00000474323 Q8N9W7 124 aa10.85□□□□□ -0.67
SAMM50-203ENST00000474323 EEF1AKMT3Q96AZ1 226 aa10.85□□□□□ -0.67
SAMM50-203ENST00000474323 TMEM101Q96IK0 257 aa10.85□□□□□ -0.67
SAMM50-203ENST00000474323 USP9YO00507 2555 aaPredicted RBP10.85□□□□□ -0.67
SAMM50-203ENST00000474323 CSMD2Q7Z408 3487 aa10.85□□□□□ -0.67
SAMM50-203ENST00000474323 TRBV7-1A0A0A6YYK4 115 aa10.84□□□□□ -0.67
SAMM50-203ENST00000474323 A8MZ25 164 aa10.84□□□□□ -0.67
SAMM50-203ENST00000474323 ZNF22P17026 224 aaPredicted RBP10.84□□□□□ -0.67
SAMM50-203ENST00000474323 APRG1Q8IVJ8 170 aa10.84□□□□□ -0.67
SAMM50-203ENST00000474323 CCL19Q99731 98 aa10.84□□□□□ -0.67
SAMM50-203ENST00000474323 TRBV6-5A0A0K0K1A5 114 aa10.84□□□□□ -0.67
SAMM50-203ENST00000474323 ECSCRQ19T08 205 aa10.84□□□□□ -0.67
SAMM50-203ENST00000474323 VMO1Q7Z5L0 202 aa10.84□□□□□ -0.67
SAMM50-203ENST00000474323 FAM19A4Q96LR4 140 aa10.84□□□□□ -0.67
SAMM50-203ENST00000474323 A0A0U1RRA0 63 aa10.83□□□□□ -0.68
SAMM50-203ENST00000474323 RNASE4P34096 147 aaKnown RBP10.83□□□□□ -0.68
SAMM50-203ENST00000474323 DUX3Q96PT4 197 aa10.83□□□□□ -0.68
SAMM50-203ENST00000474323 PTPN13Q12923 2485 aa10.83□□□□□ -0.68
SAMM50-203ENST00000474323 ABCA12Q86UK0 2595 aa10.83□□□□□ -0.68
SAMM50-203ENST00000474323 UBE2E1P51965 193 aa10.83□□□□□ -0.68
SAMM50-203ENST00000474323 DEFB104AQ8WTQ1 72 aa10.83□□□□□ -0.68
SAMM50-203ENST00000474323 PPDPFQ9H3Y8 114 aa10.83□□□□□ -0.68
SAMM50-203ENST00000474323 ANKRD17O75179 2603 aaKnown RBP10.83□□□□□ -0.68
SAMM50-203ENST00000474323 ACYP1P07311 99 aa10.82□□□□□ -0.68
SAMM50-203ENST00000474323 RHOHQ15669 191 aa10.82□□□□□ -0.68
SAMM50-203ENST00000474323 MINOS1Q5TGZ0 78 aa10.82□□□□□ -0.68
SAMM50-203ENST00000474323 MINOS1-NBL1R4GNA1 71 aa10.82□□□□□ -0.68
SAMM50-203ENST00000474323 ABCA2Q9BZC7 2435 aa10.82□□□□□ -0.68
SAMM50-203ENST00000474323 LST1O00453 97 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 231.3 ms