RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 PPP1R2P9O14990 202 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 GATCO43716 136 aaKnown RBP0.94□□□□□ -2.26
CCDC39-203ENST00000473854 SH2D1AO60880 128 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 SERF1AO75920 110 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 BRI3O95415 125 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 TRGV3P03979 118 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 S100A6P06703 90 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 RBMY1DP0C7P1 496 aaKnown RBP0.94□□□□□ -2.26
CCDC39-203ENST00000473854 ARMS2P0C7Q2 107 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 IGLC6P0CF74 106 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 ZNF705DP0CH99 300 aaPredicted RBP0.94□□□□□ -2.26
CCDC39-203ENST00000473854 ZNF705BP0CI00 300 aaPredicted RBP0.94□□□□□ -2.26
CCDC39-203ENST00000473854 RBMY1A1P0DJD3 496 aaKnown RBP0.94□□□□□ -2.26
CCDC39-203ENST00000473854 RBMY1CP0DJD4 496 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 RD3LP0DJH9 198 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 CT45A10P0DMU9 189 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 FABP4P15090 132 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 BRS3P32247 399 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 CTRLP40313 264 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 NDUFA6P56556 154 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 TAS2R60P59551 318 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 YPEL3P61236 119 aaPredicted RBP0.94□□□□□ -2.26
CCDC39-203ENST00000473854 SSTP61278 116 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 UBE2G1P62253 170 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 ERCC8Q13216 396 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 PDE6HQ13956 83 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 RBMY1FQ15415 496 aaKnown RBP0.94□□□□□ -2.26
CCDC39-203ENST00000473854 PSG3Q16557 428 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 RPEL1Q2QD12 228 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 DEFB136Q30KP8 78 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 UFSP1Q6NVU6 142 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 KCNIP4Q6PIL6 250 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 LINC00173Q6ZV60 143 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 PRNTQ86SH4 94 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 NIT1Q86X76 327 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 BAGE2Q86Y30 109 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 BPIFA4PQ86YQ2 179 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 APRG1Q8IVJ8 170 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 FAM223AQ8IWN6 122 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 LRRC75A-AS1Q8N1F1 130 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 SIGLECL1Q8N7X8 197 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 STXBP6Q8NFX7 210 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 OR10D4PQ8NGN7 298 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 NANPQ8TBE9 248 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 C18orf32Q8TCD1 76 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 EEF1AKMT3Q96AZ1 226 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 SMIM12Q96EX1 92 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 FMC1Q96HJ9 113 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 BTF3L4Q96K17 158 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 PACRGQ96M98 296 aaPredicted RBP0.94□□□□□ -2.26
CCDC39-203ENST00000473854 GPR82Q96P67 336 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 OR5B12Q96R08 314 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 TXN2Q99757 166 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 SMR3AQ99954 134 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 TCEAL7Q9BRU2 100 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 C19orf24Q9BVV8 132 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 RPP21Q9H633 154 aaKnown RBP0.94□□□□□ -2.26
CCDC39-203ENST00000473854 ZNF331Q9NQX6 463 aaPredicted RBP0.94□□□□□ -2.26
CCDC39-203ENST00000473854 TP73-AS1Q9UF72 201 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 RABAC1Q9UI14 185 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 VPREB3Q9UKI3 123 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 PSG8Q9UQ74 426 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 TRAPPC1Q9Y5R8 145 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 IGKV3-7A0A075B6H7 116 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 IGLV2-18A0A075B6J9 118 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 TRAV30A0A087WSZ9 112 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 TRBV7-1A0A0A6YYK4 115 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 MUC21A0A0G2JKD1 596 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 MUC21A0A140T8X8 626 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 SERTM2A0A1B0GWG4 89 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 PCP4L1A6NKN8 68 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 A8MWP6 167 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 SMKR1H3BMG3 65 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 H3BVH4 76 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 J3QKU1 62 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 M0QZK8 103 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 NDUFA4O00483 81 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 NCR2O95944 276 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 TGFAP01135 160 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 NPYP01303 97 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 P01737 135 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 HLA-DQA1P01909 254 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 MT-ND6P03923 174 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 S100A8P05109 93 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 FABP1P07148 127 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 LGALS1P09382 135 aaKnown RBP0.93□□□□□ -2.26
CCDC39-203ENST00000473854 ESDP10768 282 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 RPL7P18124 248 aaKnown RBP0.93□□□□□ -2.26
CCDC39-203ENST00000473854 PMCHP20382 165 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 S100PP25815 95 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 SRIP30626 198 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 RAB9AP51151 201 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 ZNF138P52744 262 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 FOXA3P55318 350 aaPredicted RBP0.93□□□□□ -2.26
CCDC39-203ENST00000473854 RAB4BP61018 213 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 HBBP68871 147 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 PSG9Q00887 426 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 ATP5G2Q06055 141 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 Q0VG73 95 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 JOSD1Q15040 202 aaPredicted RBP0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms