RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CXXC4Q9H2H0 198 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 TNCP24821 2201 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 IGLV3-12A0A075B6K2 115 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 IBA57-AS1B1ANH7 110 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 NTN3O00634 580 aaPredicted RBP3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 SS18Q15532 418 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 ODF3L2Q3SX64 289 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 ZNF826PQ6ZT77 177 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 OVOL2Q9BRP0 275 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 LINC00474Q9P2X8 69 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 IGKV2-40A0A087WW87 121 aaPredicted RBP3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 TRAV13-2A0A0B4J235 113 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 IGKV2D-40P01614 121 aaPredicted RBP3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 IGHV1-69P01742 117 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 HILS1P60008 231 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 SPANXN1Q5VSR9 72 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 MOB4Q9Y3A3 225 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 C22orf24Q9Y442 160 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 PCNX2A6NKB5 2137 aa3.75□□□□□ -1.81
TMEM39A-206ENST00000473684 E7EUB6 86 aa3.75□□□□□ -1.81
TMEM39A-206ENST00000473684 LINC01565O15544 149 aa3.75□□□□□ -1.81
TMEM39A-206ENST00000473684 B3GALT5-AS1P59052 145 aa3.75□□□□□ -1.81
TMEM39A-206ENST00000473684 CIRBPQ14011 172 aaKnown RBP3.75□□□□□ -1.81
TMEM39A-206ENST00000473684 LINC00846Q9NV44 126 aa3.75□□□□□ -1.81
TMEM39A-206ENST00000473684 IGHV1-58A0A0C4DH39 117 aa3.75□□□□□ -1.81
TMEM39A-206ENST00000473684 C17orf58Q2M2W7 97 aa3.75□□□□□ -1.81
TMEM39A-206ENST00000473684 ZNF833PQ6ZTB9 187 aa3.75□□□□□ -1.81
TMEM39A-206ENST00000473684 OBSCN-AS1Q96MR7 158 aa3.75□□□□□ -1.81
TMEM39A-206ENST00000473684 DSCAML1Q8TD84 2053 aa3.74□□□□□ -1.81
TMEM39A-206ENST00000473684 IGHV7-4-1A0A0J9YVY3 117 aa3.74□□□□□ -1.81
TMEM39A-206ENST00000473684 ADAMTSL4-AS1Q5T5F5 129 aa3.74□□□□□ -1.81
TMEM39A-206ENST00000473684 LINC00574Q9H8X3 128 aa3.74□□□□□ -1.81
TMEM39A-206ENST00000473684 DSCAMO60469 2012 aa3.74□□□□□ -1.81
TMEM39A-206ENST00000473684 TRAV12-3A0A0B4J271 114 aa3.74□□□□□ -1.81
TMEM39A-206ENST00000473684 ZNHIT1O43257 154 aa3.74□□□□□ -1.81
TMEM39A-206ENST00000473684 IGHV3-9P01782 118 aa3.74□□□□□ -1.81
TMEM39A-206ENST00000473684 RPL28P46779 137 aaKnown RBP3.74□□□□□ -1.81
TMEM39A-206ENST00000473684 BLCAPP62952 87 aa3.74□□□□□ -1.81
TMEM39A-206ENST00000473684 Q8TAT8 98 aa3.74□□□□□ -1.81
TMEM39A-206ENST00000473684 LEAP2Q969E1 77 aa3.74□□□□□ -1.81
TMEM39A-206ENST00000473684 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
TMEM39A-206ENST00000473684 KRTAP9-4Q9BYQ2 154 aa3.74□□□□□ -1.81
TMEM39A-206ENST00000473684 SEC16AO15027 2179 aa3.74□□□□□ -1.81
TMEM39A-206ENST00000473684 IGKV3D-20A0A0C4DH25 116 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 IGLV5-39A0A0G2JS06 123 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 TRBV27A0A0K0K1C4 114 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 F8WEM9 126 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 C10orf55Q5SWW7 151 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 RUSC1-AS1Q66K80 236 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 TRAV23DV6A0A075B6W5 121 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 IGHV4-28A0A0C4DH34 117 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 IGKV1-17P01599 117 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 TRBV12-3P01733 135 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 TFF1P04155 84 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 NACAE9PAV3 2078 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 CACNA1AO00555 2505 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 IGKV1D-17A0A075B6S4 117 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 IGHV3-64DA0A0J9YX35 117 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 SPTY2D1-AS1A0A0U1RR47 76 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 NDUFB3O43676 98 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 IGHV3-30-3P0DP02 117 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 CCL3P10147 92 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 VPREB1P12018 145 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 HCP5Q6MZN7 132 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 Q9UF83 564 aa3.73□□□□□ -1.81
TMEM39A-206ENST00000473684 SRRM5B3KS81 715 aa3.72□□□□□ -1.81
TMEM39A-206ENST00000473684 SOCS3O14543 225 aa3.72□□□□□ -1.81
TMEM39A-206ENST00000473684 LHBP01229 141 aa3.72□□□□□ -1.81
TMEM39A-206ENST00000473684 RPL27AP46776 148 aaKnown RBP3.72□□□□□ -1.81
TMEM39A-206ENST00000473684 DAD1P61803 113 aa3.72□□□□□ -1.81
TMEM39A-206ENST00000473684 Q8N2B8 174 aa3.72□□□□□ -1.81
TMEM39A-206ENST00000473684 RPL39LQ96EH5 51 aaKnown RBP3.72□□□□□ -1.81
TMEM39A-206ENST00000473684 IGHV4OR15-8A0A075B7B6 117 aa3.72□□□□□ -1.81
TMEM39A-206ENST00000473684 A0A087WW49 117 aa3.72□□□□□ -1.81
TMEM39A-206ENST00000473684 LY6G6EA0A0G2JKS1 128 aa3.72□□□□□ -1.81
TMEM39A-206ENST00000473684 SPRY3O43610 288 aa3.72□□□□□ -1.81
TMEM39A-206ENST00000473684 IGLV2-23P01705 113 aa3.72□□□□□ -1.81
TMEM39A-206ENST00000473684 ESRGQ1W209 222 aa3.72□□□□□ -1.81
TMEM39A-206ENST00000473684 KRTAP9-3Q9BYQ3 159 aa3.72□□□□□ -1.81
TMEM39A-206ENST00000473684 NDUFA12Q9UI09 145 aa3.72□□□□□ -1.81
TMEM39A-206ENST00000473684 PRRC2AP48634 2157 aaKnown RBP3.72□□□□□ -1.81
TMEM39A-206ENST00000473684 IGHV1-18A0A0C4DH31 117 aa3.71□□□□□ -1.81
TMEM39A-206ENST00000473684 IGHV5-10-1A0A0J9YXX1 117 aa3.71□□□□□ -1.81
TMEM39A-206ENST00000473684 I3L2K1 104 aa3.71□□□□□ -1.81
TMEM39A-206ENST00000473684 MRPS21P82921 87 aaKnown RBP3.71□□□□□ -1.81
TMEM39A-206ENST00000473684 TM2D3Q9BRN9 247 aa3.71□□□□□ -1.81
TMEM39A-206ENST00000473684 POLR2KP53803 58 aaKnown RBP3.71□□□□□ -1.82
TMEM39A-206ENST00000473684 VMO1Q7Z5L0 202 aa3.71□□□□□ -1.82
TMEM39A-206ENST00000473684 GPHB5Q86YW7 130 aa3.71□□□□□ -1.82
TMEM39A-206ENST00000473684 CCL13Q99616 98 aa3.71□□□□□ -1.82
TMEM39A-206ENST00000473684 C14orf132Q9NPU4 83 aa3.71□□□□□ -1.82
TMEM39A-206ENST00000473684 SPRR3Q9UBC9 169 aa3.71□□□□□ -1.82
TMEM39A-206ENST00000473684 CHD9Q3L8U1 2897 aa3.71□□□□□ -1.82
TMEM39A-206ENST00000473684 DYNLRB2Q8TF09 96 aa3.7□□□□□ -1.82
TMEM39A-206ENST00000473684 RBM12B-AS1Q9P1G2 102 aa3.7□□□□□ -1.82
TMEM39A-206ENST00000473684 C11orf21Q9P2W6 132 aa3.7□□□□□ -1.82
TMEM39A-206ENST00000473684 NAV3Q8IVL0 2385 aa3.7□□□□□ -1.82
TMEM39A-206ENST00000473684 IGHV3-21A0A0B4J1V1 117 aa3.7□□□□□ -1.82
TMEM39A-206ENST00000473684 SEC61BP60468 96 aaKnown RBP3.7□□□□□ -1.82
TMEM39A-206ENST00000473684 KTN1-AS1Q86SY8 53 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms