RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 USMG5Q96IX5 58 aa10.5□□□□□ -0.73
ABCF3-210ENST00000473311 RHPN1-AS1Q9BWJ2 59 aa10.5□□□□□ -0.73
ABCF3-210ENST00000473311 PRO1854Q9UHT4 67 aa10.5□□□□□ -0.73
ABCF3-210ENST00000473311 SPTBN4Q9H254 2564 aa10.5□□□□□ -0.73
ABCF3-210ENST00000473311 ZNF815PA8K554 130 aa10.5□□□□□ -0.73
ABCF3-210ENST00000473311 C19orf84I3L1E1 186 aa10.5□□□□□ -0.73
ABCF3-210ENST00000473311 C3orf56Q8N813 242 aa10.5□□□□□ -0.73
ABCF3-210ENST00000473311 NTN5Q8WTR8 489 aaPredicted RBP10.5□□□□□ -0.73
ABCF3-210ENST00000473311 MAP1AP78559 2803 aaPredicted RBP10.49□□□□□ -0.73
ABCF3-210ENST00000473311 P0DMU3 169 aa10.49□□□□□ -0.73
ABCF3-210ENST00000473311 FAM231AP0DMU4 169 aa10.49□□□□□ -0.73
ABCF3-210ENST00000473311 FAM231CP0DMU5 169 aa10.49□□□□□ -0.73
ABCF3-210ENST00000473311 IGHV4-38-2P0DP08 117 aa10.49□□□□□ -0.73
ABCF3-210ENST00000473311 FAM19A4Q96LR4 140 aa10.49□□□□□ -0.73
ABCF3-210ENST00000473311 CHD8Q9HCK8 2581 aa10.49□□□□□ -0.73
ABCF3-210ENST00000473311 H3BUX3 64 aa10.49□□□□□ -0.73
ABCF3-210ENST00000473311 PPP1R17O96001 155 aa10.49□□□□□ -0.73
ABCF3-210ENST00000473311 CHCHD5Q9BSY4 110 aa10.49□□□□□ -0.73
ABCF3-210ENST00000473311 LGALS9O00182 355 aa10.48□□□□□ -0.73
ABCF3-210ENST00000473311 IGHG2P01859 326 aa10.48□□□□□ -0.73
ABCF3-210ENST00000473311 ATXN8Q156A1 80 aa10.48□□□□□ -0.73
ABCF3-210ENST00000473311 H3BMM0 161 aa10.48□□□□□ -0.73
ABCF3-210ENST00000473311 BLCAPP62952 87 aa10.48□□□□□ -0.73
ABCF3-210ENST00000473311 UBE2WQ96B02 151 aa10.48□□□□□ -0.73
ABCF3-210ENST00000473311 COL12A1Q99715 3063 aa10.48□□□□□ -0.73
ABCF3-210ENST00000473311 IGHV4-61A0A0C4DH41 118 aa10.48□□□□□ -0.73
ABCF3-210ENST00000473311 APRG1Q8IVJ8 170 aa10.48□□□□□ -0.73
ABCF3-210ENST00000473311 LINC00526Q96FQ7 95 aa10.48□□□□□ -0.73
ABCF3-210ENST00000473311 EMP1P54849 157 aa10.47□□□□□ -0.73
ABCF3-210ENST00000473311 Q6ZS46 218 aa10.47□□□□□ -0.73
ABCF3-210ENST00000473311 MRAPQ8TCY5 172 aa10.47□□□□□ -0.73
ABCF3-210ENST00000473311 JPT2Q9H910 190 aa10.47□□□□□ -0.73
ABCF3-210ENST00000473311 H3BUA1 57 aa10.47□□□□□ -0.73
ABCF3-210ENST00000473311 TGFAP01135 160 aa10.47□□□□□ -0.73
ABCF3-210ENST00000473311 HERVK_113P63121 156 aa10.47□□□□□ -0.73
ABCF3-210ENST00000473311 DAZ1Q9NQZ3 744 aaKnown RBP10.47□□□□□ -0.73
ABCF3-210ENST00000473311 TP53TG1Q9Y2A0 90 aa10.47□□□□□ -0.73
ABCF3-210ENST00000473311 LOC107984640A0A0U1RRK4 108 aa10.46□□□□□ -0.73
ABCF3-210ENST00000473311 F5H697 171 aa10.46□□□□□ -0.74
ABCF3-210ENST00000473311 EDN2P20800 178 aa10.46□□□□□ -0.74
ABCF3-210ENST00000473311 ZNRF2Q8NHG8 242 aa10.46□□□□□ -0.74
ABCF3-210ENST00000473311 PLEKHB2Q96CS7 222 aa10.46□□□□□ -0.74
ABCF3-210ENST00000473311 PIMREGQ9BSJ6 248 aa10.46□□□□□ -0.74
ABCF3-210ENST00000473311 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.46□□□□□ -0.748e-7■■■■□ 20.9
ABCF3-210ENST00000473311 A0A087WWL8 130 aa10.45□□□□□ -0.74
ABCF3-210ENST00000473311 TRBV10-2A0A0K0K1G8 114 aa10.45□□□□□ -0.74
ABCF3-210ENST00000473311 CFC1BP0CG36 223 aa10.45□□□□□ -0.74
ABCF3-210ENST00000473311 CFC1P0CG37 223 aa10.45□□□□□ -0.74
ABCF3-210ENST00000473311 KLHL30-AS1Q8NEE0 82 aa10.45□□□□□ -0.74
ABCF3-210ENST00000473311 KIF25-AS1Q9Y6Z4 181 aa10.45□□□□□ -0.74
ABCF3-210ENST00000473311 CRYGDP07320 174 aa10.45□□□□□ -0.74
ABCF3-210ENST00000473311 LINC00315P59091 139 aa10.45□□□□□ -0.74
ABCF3-210ENST00000473311 TRAV12-3A0A0B4J271 114 aa10.44□□□□□ -0.74
ABCF3-210ENST00000473311 A6NDX4 124 aa10.44□□□□□ -0.74
ABCF3-210ENST00000473311 C11orf86A6NJI1 115 aa10.44□□□□□ -0.74
ABCF3-210ENST00000473311 NXPH4O95158 308 aa10.44□□□□□ -0.74
ABCF3-210ENST00000473311 LINC01620Q4KN68 170 aa10.44□□□□□ -0.74
ABCF3-210ENST00000473311 SUMO4Q6EEV6 95 aa10.44□□□□□ -0.74
ABCF3-210ENST00000473311 KLLNB2CW77 178 aa10.44□□□□□ -0.74
ABCF3-210ENST00000473311 HERVK_113P61574 105 aa10.44□□□□□ -0.74
ABCF3-210ENST00000473311 RPL39P62891 51 aaKnown RBP10.44□□□□□ -0.74
ABCF3-210ENST00000473311 IGHV4OR15-8A0A075B7B6 117 aa10.43□□□□□ -0.74
ABCF3-210ENST00000473311 A0A087WW49 117 aa10.43□□□□□ -0.74
ABCF3-210ENST00000473311 TSHBP01222 138 aa10.43□□□□□ -0.74
ABCF3-210ENST00000473311 ACYP1P07311 99 aa10.43□□□□□ -0.74
ABCF3-210ENST00000473311 COX6B1P14854 86 aa10.43□□□□□ -0.74
ABCF3-210ENST00000473311 PAPPA-AS1Q5QFB9 102 aa10.43□□□□□ -0.74
ABCF3-210ENST00000473311 POM121L12Q8N7R1 296 aa10.43□□□□□ -0.74
ABCF3-210ENST00000473311 SPG11Q96JI7 2443 aa10.43□□□□□ -0.74
ABCF3-210ENST00000473311 TMEM170BQ5T4T1 132 aa10.43□□□□□ -0.74
ABCF3-210ENST00000473311 FAM74A4Q5TZK3 123 aa10.43□□□□□ -0.74
ABCF3-210ENST00000473311 IGLV4-69A0A075B6H9 119 aa10.43□□□□□ -0.74
ABCF3-210ENST00000473311 POLR2KP53803 58 aaKnown RBP10.43□□□□□ -0.74
ABCF3-210ENST00000473311 ZNF56Q15929 161 aa10.43□□□□□ -0.74
ABCF3-210ENST00000473311 TEX49A0A1B0GTD5 131 aa10.42□□□□□ -0.74
ABCF3-210ENST00000473311 SDHAF1A6NFY7 115 aa10.42□□□□□ -0.74
ABCF3-210ENST00000473311 H3BT86 120 aa10.42□□□□□ -0.74
ABCF3-210ENST00000473311 PMVKQ15126 192 aa10.42□□□□□ -0.74
ABCF3-210ENST00000473311 A0A0J9YY99 117 aa10.42□□□□□ -0.74
ABCF3-210ENST00000473311 FAM236AA0A1B0GUQ0 79 aa10.42□□□□□ -0.74
ABCF3-210ENST00000473311 FAM236BA0A1B0GV22 79 aa10.42□□□□□ -0.74
ABCF3-210ENST00000473311 VCYO14598 125 aa10.42□□□□□ -0.74
ABCF3-210ENST00000473311 IGLV1-40P01703 118 aa10.42□□□□□ -0.74
ABCF3-210ENST00000473311 IGHV3-30P01768 117 aa10.42□□□□□ -0.74
ABCF3-210ENST00000473311 IGHV3-30-5P0DP03 117 aa10.42□□□□□ -0.74
ABCF3-210ENST00000473311 GNLYP22749 145 aa10.42□□□□□ -0.74
ABCF3-210ENST00000473311 IGIPA6NJ69 53 aa10.41□□□□□ -0.74
ABCF3-210ENST00000473311 IGKV3-20P01619 116 aa10.41□□□□□ -0.74
ABCF3-210ENST00000473311 DCANP1Q8TF63 244 aa10.41□□□□□ -0.74
ABCF3-210ENST00000473311 A0A0B4J2C4 111 aa10.41□□□□□ -0.74
ABCF3-210ENST00000473311 C10orf105Q8TEF2 133 aa10.41□□□□□ -0.74
ABCF3-210ENST00000473311 ITPR1Q14643 2758 aa10.41□□□□□ -0.74
ABCF3-210ENST00000473311 CSPG4Q6UVK1 2322 aa10.41□□□□□ -0.74
ABCF3-210ENST00000473311 DEFB121Q5J5C9 76 aa10.4□□□□□ -0.74
ABCF3-210ENST00000473311 SLC25A29Q8N8R3 303 aa10.4□□□□□ -0.74
ABCF3-210ENST00000473311 CCL19Q99731 98 aa10.4□□□□□ -0.74
ABCF3-210ENST00000473311 ZNF256Q9Y2P7 627 aaPredicted RBP10.4□□□□□ -0.74
ABCF3-210ENST00000473311 TRGV11A0A075B6L2 103 aa10.4□□□□□ -0.74
ABCF3-210ENST00000473311 F5H768 121 aa10.4□□□□□ -0.74
ABCF3-210ENST00000473311 IGHV3-33P01772 117 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms