RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 RPL35P42766 123 aaKnown RBP10.04□□□□□ -0.8
VTI1A-203ENST00000472892 Q0VG73 95 aa10.04□□□□□ -0.8
VTI1A-203ENST00000472892 ZNF56Q15929 161 aa10.04□□□□□ -0.8
VTI1A-203ENST00000472892 SPANXN1Q5VSR9 72 aa10.04□□□□□ -0.8
VTI1A-203ENST00000472892 MUC21A0A0G2JKD1 596 aa10.03□□□□□ -0.8
VTI1A-203ENST00000472892 MUC21A0A140T8X8 626 aa10.03□□□□□ -0.8
VTI1A-203ENST00000472892 TMEM262E9PQX1 116 aa10.03□□□□□ -0.8
VTI1A-203ENST00000472892 C11orf52Q96A22 123 aa10.03□□□□□ -0.8
VTI1A-203ENST00000472892 MANBALQ9NQG1 85 aa10.03□□□□□ -0.8
VTI1A-203ENST00000472892 KIF25-AS1Q9Y6Z4 181 aa10.03□□□□□ -0.8
VTI1A-203ENST00000472892 DMBT1Q9UGM3 2413 aaPredicted RBP10.02□□□□□ -0.81
VTI1A-203ENST00000472892 RBFOX3A6NFN3 312 aa10.02□□□□□ -0.81
VTI1A-203ENST00000472892 ENHOQ6UWT2 76 aa10.02□□□□□ -0.81
VTI1A-203ENST00000472892 DERL1Q9BUN8 251 aa10.02□□□□□ -0.81
VTI1A-203ENST00000472892 GNG13Q9P2W3 67 aa10.02□□□□□ -0.81
VTI1A-203ENST00000472892 F5H697 171 aa10.01□□□□□ -0.81
VTI1A-203ENST00000472892 RAB5CP51148 216 aa10.01□□□□□ -0.81
VTI1A-203ENST00000472892 LINC01620Q4KN68 170 aa10.01□□□□□ -0.81
VTI1A-203ENST00000472892 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.01□□□□□ -0.81
VTI1A-203ENST00000472892 VAX2Q9UIW0 290 aa10.01□□□□□ -0.81
VTI1A-203ENST00000472892 FLG2Q5D862 2391 aaPredicted RBP10□□□□□ -0.81
VTI1A-203ENST00000472892 IGLV2-8P01709 118 aa10□□□□□ -0.81
VTI1A-203ENST00000472892 SSTP61278 116 aa10□□□□□ -0.81
VTI1A-203ENST00000472892 MPV17L2Q567V2 206 aa10□□□□□ -0.81
VTI1A-203ENST00000472892 NTM-AS1Q6ZSK4 140 aa10□□□□□ -0.81
VTI1A-203ENST00000472892 PLA2G1BP04054 148 aaKnown RBP9.99□□□□□ -0.81
VTI1A-203ENST00000472892 IGLC6P0CF74 106 aa9.99□□□□□ -0.81
VTI1A-203ENST00000472892 SMIM17P0DL12 118 aa9.99□□□□□ -0.81
VTI1A-203ENST00000472892 PKIAP61925 76 aa9.99□□□□□ -0.81
VTI1A-203ENST00000472892 TMEM97Q5BJF2 176 aa9.99□□□□□ -0.81
VTI1A-203ENST00000472892 EIF5AL1Q6IS14 154 aaKnown RBP9.99□□□□□ -0.81
VTI1A-203ENST00000472892 C15orf54Q8N8G6 183 aa9.99□□□□□ -0.81
VTI1A-203ENST00000472892 AP1S3Q96PC3 154 aa9.99□□□□□ -0.81
VTI1A-203ENST00000472892 CHCHD5Q9BSY4 110 aa9.99□□□□□ -0.81
VTI1A-203ENST00000472892 C1orf43Q9BWL3 253 aa9.99□□□□□ -0.81
VTI1A-203ENST00000472892 C19orf71A6NCJ1 209 aa9.98□□□□□ -0.81
VTI1A-203ENST00000472892 RPS20P60866 119 aaKnown RBP9.98□□□□□ -0.81
VTI1A-203ENST00000472892 CENPWQ5EE01 88 aa9.98□□□□□ -0.81
VTI1A-203ENST00000472892 DAZAP1Q96EP5 407 aaKnown RBP9.98□□□□□ -0.81
VTI1A-203ENST00000472892 SMIM12Q96EX1 92 aa9.98□□□□□ -0.81
VTI1A-203ENST00000472892 RAB19A4D1S5 217 aa9.97□□□□□ -0.81
VTI1A-203ENST00000472892 TEX46H3BTG2 121 aa9.97□□□□□ -0.81
VTI1A-203ENST00000472892 M0QY20 66 aa9.97□□□□□ -0.81
VTI1A-203ENST00000472892 CRPP02741 224 aa9.97□□□□□ -0.81
VTI1A-203ENST00000472892 ANGP03950 147 aaKnown RBP9.97□□□□□ -0.81
VTI1A-203ENST00000472892 GZMBP10144 247 aa9.97□□□□□ -0.81
VTI1A-203ENST00000472892 SULT1A2P50226 295 aa9.97□□□□□ -0.81
VTI1A-203ENST00000472892 C14orf177Q52M58 125 aa9.97□□□□□ -0.81
VTI1A-203ENST00000472892 SCXQ7RTU7 201 aa9.97□□□□□ -0.81
VTI1A-203ENST00000472892 FER1L6-AS1Q8NA97 138 aa9.97□□□□□ -0.81
VTI1A-203ENST00000472892 OR2D3Q8NGH3 330 aa9.97□□□□□ -0.81
VTI1A-203ENST00000472892 PDE6DO43924 150 aa9.96□□□□□ -0.82
VTI1A-203ENST00000472892 GNG4P50150 75 aa9.96□□□□□ -0.82
VTI1A-203ENST00000472892 CACNG7P62955 275 aa9.96□□□□□ -0.82
VTI1A-203ENST00000472892 MEF2BQ02080 365 aaPredicted RBP9.96□□□□□ -0.82
VTI1A-203ENST00000472892 MIAQ16674 131 aa9.96□□□□□ -0.82
VTI1A-203ENST00000472892 CHAC1Q9BUX1 264 aa9.96□□□□□ -0.82
VTI1A-203ENST00000472892 PRR34Q9NV39 138 aa9.96□□□□□ -0.82
VTI1A-203ENST00000472892 RBX1P62877 108 aa9.95□□□□□ -0.82
VTI1A-203ENST00000472892 IQCJQ1A5X6 159 aa9.95□□□□□ -0.82
VTI1A-203ENST00000472892 TPPP3Q9BW30 176 aa9.95□□□□□ -0.82
VTI1A-203ENST00000472892 TRBV20OR9-2A0A075B6H5 130 aa9.94□□□□□ -0.82
VTI1A-203ENST00000472892 TRBV25-1A0A075B6N4 114 aa9.94□□□□□ -0.82
VTI1A-203ENST00000472892 F2Z2F3 143 aa9.94□□□□□ -0.82
VTI1A-203ENST00000472892 H7C1H1 209 aa9.94□□□□□ -0.82
VTI1A-203ENST00000472892 GAGE6Q13070 117 aa9.94□□□□□ -0.82
VTI1A-203ENST00000472892 TCTE3Q8IZS6 198 aa9.94□□□□□ -0.82
VTI1A-203ENST00000472892 MED9Q9NWA0 146 aa9.94□□□□□ -0.82
VTI1A-203ENST00000472892 XKRY2A2RUG3 117 aa9.93□□□□□ -0.82
VTI1A-203ENST00000472892 USP17L23D6RBM5 183 aa9.93□□□□□ -0.82
VTI1A-203ENST00000472892 P01737 135 aa9.93□□□□□ -0.82
VTI1A-203ENST00000472892 MGPP08493 103 aa9.93□□□□□ -0.82
VTI1A-203ENST00000472892 SUMO4Q6EEV6 95 aa9.93□□□□□ -0.82
VTI1A-203ENST00000472892 KRTAP26-1Q6PEX3 210 aa9.93□□□□□ -0.82
VTI1A-203ENST00000472892 LINC00269Q8N2A0 174 aa9.93□□□□□ -0.82
VTI1A-203ENST00000472892 CIRBP-AS1Q8TBR5 109 aa9.93□□□□□ -0.82
VTI1A-203ENST00000472892 BIN3Q9NQY0 253 aa9.93□□□□□ -0.82
VTI1A-203ENST00000472892 IGHV1-24A0A0C4DH33 117 aa9.92□□□□□ -0.82
VTI1A-203ENST00000472892 IFNA1P01562 189 aa9.92□□□□□ -0.82
VTI1A-203ENST00000472892 BCL2P10415 239 aa9.92□□□□□ -0.82
VTI1A-203ENST00000472892 LYZL1Q6UWQ5 148 aa9.92□□□□□ -0.82
VTI1A-203ENST00000472892 SLC51BQ86UW2 128 aa9.92□□□□□ -0.82
VTI1A-203ENST00000472892 C9orf62Q8N4C0 152 aa9.92□□□□□ -0.82
VTI1A-203ENST00000472892 DEFB104AQ8WTQ1 72 aa9.92□□□□□ -0.82
VTI1A-203ENST00000472892 HLA-DQA1P01909 254 aa9.91□□□□□ -0.82
VTI1A-203ENST00000472892 PRSS1P07477 247 aa9.91□□□□□ -0.82
VTI1A-203ENST00000472892 NTF3P20783 257 aa9.91□□□□□ -0.82
VTI1A-203ENST00000472892 KRTAP10-4P60372 401 aaPredicted RBP9.91□□□□□ -0.82
VTI1A-203ENST00000472892 DGAT2L7PQ6IED9 249 aa9.91□□□□□ -0.82
VTI1A-203ENST00000472892 WDR73Q6P4I2 378 aa9.91□□□□□ -0.82
VTI1A-203ENST00000472892 RASL11AQ6T310 242 aa9.91□□□□□ -0.82
VTI1A-203ENST00000472892 NUDT10Q8NFP7 164 aa9.91□□□□□ -0.82
VTI1A-203ENST00000472892 NUDT11Q96G61 164 aa9.91□□□□□ -0.82
VTI1A-203ENST00000472892 KRTAP29-1A8MX34 341 aaPredicted RBP9.9□□□□□ -0.82
VTI1A-203ENST00000472892 TRGC1P0CF51 173 aa9.9□□□□□ -0.82
VTI1A-203ENST00000472892 NKX2-5P52952 324 aaPredicted RBP9.9□□□□□ -0.82
VTI1A-203ENST00000472892 NIT2Q9NQR4 276 aa9.9□□□□□ -0.82
VTI1A-203ENST00000472892 A0A1B0GUV1 79 aa9.89□□□□□ -0.83
VTI1A-203ENST00000472892 TAGLN2P37802 199 aaKnown RBP9.89□□□□□ -0.83
VTI1A-203ENST00000472892 CTRLP40313 264 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms