RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 REG3AQ06141 175 aa11.84□□□□□ -0.51
SORT1-203ENST00000471996 GAGE6Q13070 117 aa11.84□□□□□ -0.51
SORT1-203ENST00000471996 MAJINQ3KP22 176 aa11.84□□□□□ -0.51
SORT1-203ENST00000471996 TMEM97Q5BJF2 176 aa11.84□□□□□ -0.51
SORT1-203ENST00000471996 ZFP82Q8N141 532 aa11.84□□□□□ -0.51
SORT1-203ENST00000471996 GCHFRP30047 84 aa11.83□□□□□ -0.52
SORT1-203ENST00000471996 CDC34P49427 236 aaPredicted RBP11.83□□□□□ -0.52
SORT1-203ENST00000471996 CRIP1P50238 77 aa11.83□□□□□ -0.52
SORT1-203ENST00000471996 SRSF9Q13242 221 aaKnown RBP eCLIP11.83□□□□□ -0.52
SORT1-203ENST00000471996 RGS21Q2M5E4 152 aa11.83□□□□□ -0.52
SORT1-203ENST00000471996 PRR27Q6MZM9 219 aa11.83□□□□□ -0.52
SORT1-203ENST00000471996 TRAV8-4A0A0B4J246 113 aa11.82□□□□□ -0.52
SORT1-203ENST00000471996 MUC21A0A0G2JKD1 596 aa11.82□□□□□ -0.52
SORT1-203ENST00000471996 P01737 135 aa11.82□□□□□ -0.52
SORT1-203ENST00000471996 STPG4Q8N801 248 aa11.82□□□□□ -0.52
SORT1-203ENST00000471996 LYPD6BQ8NI32 183 aa11.82□□□□□ -0.52
SORT1-203ENST00000471996 TNFSF18Q9UNG2 199 aa11.82□□□□□ -0.52
SORT1-203ENST00000471996 NDUFS6O75380 124 aaKnown RBP11.81□□□□□ -0.52
SORT1-203ENST00000471996 ATP6V0CP27449 155 aa11.81□□□□□ -0.52
SORT1-203ENST00000471996 VAX2Q9UIW0 290 aa11.81□□□□□ -0.52
SORT1-203ENST00000471996 BORCS7-ASMTA0A0B4J1R7 106 aa11.8□□□□□ -0.52
SORT1-203ENST00000471996 IGKV2-24A0A0C4DH68 120 aa11.8□□□□□ -0.52
SORT1-203ENST00000471996 SH2D1AO60880 128 aa11.8□□□□□ -0.52
SORT1-203ENST00000471996 GZMBP10144 247 aa11.8□□□□□ -0.52
SORT1-203ENST00000471996 ZNF56Q15929 161 aa11.8□□□□□ -0.52
SORT1-203ENST00000471996 PRSS3P2Q8NHM4 247 aa11.8□□□□□ -0.52
SORT1-203ENST00000471996 RAB24Q969Q5 203 aa11.8□□□□□ -0.52
SORT1-203ENST00000471996 DERL1Q9BUN8 251 aa11.8□□□□□ -0.52
SORT1-203ENST00000471996 TMEM167BQ9NRX6 74 aa11.8□□□□□ -0.52
SORT1-203ENST00000471996 TRBV25-1A0A075B6N4 114 aa11.79□□□□□ -0.52
SORT1-203ENST00000471996 TRBV6-1A0A0K0K1D8 114 aa11.79□□□□□ -0.52
SORT1-203ENST00000471996 Q5BKY6 102 aa11.79□□□□□ -0.52
SORT1-203ENST00000471996 Q86TA4 180 aa11.79□□□□□ -0.52
SORT1-203ENST00000471996 ACTR3CQ9C0K3 210 aaPredicted RBP11.79□□□□□ -0.52
SORT1-203ENST00000471996 FAT4Q6V0I7 4981 aa11.79□□□□□ -0.52
SORT1-203ENST00000471996 TMSB15BA0A087X1C1 80 aa11.78□□□□□ -0.52
SORT1-203ENST00000471996 RPS10P46783 165 aaKnown RBP11.78□□□□□ -0.52
SORT1-203ENST00000471996 C20orf203Q8NBC4 194 aa11.78□□□□□ -0.52
SORT1-203ENST00000471996 FXYD6-FXYD2A0A087WZ82 144 aa11.77□□□□□ -0.53
SORT1-203ENST00000471996 RAB5CP51148 216 aa11.77□□□□□ -0.53
SORT1-203ENST00000471996 IQCJQ1A5X6 159 aa11.77□□□□□ -0.53
SORT1-203ENST00000471996 LINC01559Q495D7 138 aa11.77□□□□□ -0.53
SORT1-203ENST00000471996 FAM162BQ5T6X4 162 aa11.77□□□□□ -0.53
SORT1-203ENST00000471996 COX8CQ7Z4L0 72 aa11.77□□□□□ -0.53
SORT1-203ENST00000471996 A0A0U1RQV1 116 aa11.76□□□□□ -0.53
SORT1-203ENST00000471996 CXorf1O96002 111 aa11.76□□□□□ -0.53
SORT1-203ENST00000471996 A0A1W2PRE2 83 aa11.75□□□□□ -0.53
SORT1-203ENST00000471996 RPL7L1Q6DKI1 246 aaKnown RBP11.75□□□□□ -0.53
SORT1-203ENST00000471996 Q6ZRP5 223 aa11.75□□□□□ -0.53
SORT1-203ENST00000471996 C15orf56Q8N910 161 aa11.75□□□□□ -0.53
SORT1-203ENST00000471996 IGHV1-24A0A0C4DH33 117 aa11.74□□□□□ -0.53
SORT1-203ENST00000471996 H7C1H1 209 aa11.74□□□□□ -0.53
SORT1-203ENST00000471996 IFNA7P01567 189 aa11.74□□□□□ -0.53
SORT1-203ENST00000471996 ZNF674Q2M3X9 581 aa11.74□□□□□ -0.53
SORT1-203ENST00000471996 CFAP161Q6P656 301 aa11.74□□□□□ -0.53
SORT1-203ENST00000471996 GFRA4Q9GZZ7 299 aa11.74□□□□□ -0.53
SORT1-203ENST00000471996 ZFP30Q9Y2G7 519 aa11.74□□□□□ -0.53
SORT1-203ENST00000471996 A0A1B0GUV1 79 aa11.73□□□□□ -0.53
SORT1-203ENST00000471996 PEX7O00628 323 aa11.73□□□□□ -0.53
SORT1-203ENST00000471996 IGLV4-60A0A075B6I1 120 aa11.72□□□□□ -0.53
SORT1-203ENST00000471996 A0A096LNI7 61 aa11.72□□□□□ -0.53
SORT1-203ENST00000471996 CTXND1A0A1B0GTU2 59 aa11.72□□□□□ -0.53
SORT1-203ENST00000471996 FAM231BA6NCW3 169 aa11.72□□□□□ -0.53
SORT1-203ENST00000471996 F5H697 171 aa11.72□□□□□ -0.53
SORT1-203ENST00000471996 G3V3Q6 166 aa11.72□□□□□ -0.53
SORT1-203ENST00000471996 OR10AG1Q8NH19 301 aa11.72□□□□□ -0.53
SORT1-203ENST00000471996 NKX6-2Q9C056 277 aaPredicted RBP11.72□□□□□ -0.53
SORT1-203ENST00000471996 ZNF471Q9BX82 626 aaPredicted RBP11.71□□□□□ -0.53
SORT1-203ENST00000471996 ARPC5O15511 151 aa11.7□□□□□ -0.54
SORT1-203ENST00000471996 HIGD2BQ4VC39 106 aa11.7□□□□□ -0.54
SORT1-203ENST00000471996 AKR1C8PQ5T2L2 129 aa11.7□□□□□ -0.54
SORT1-203ENST00000471996 HIST1H2BAQ96A08 127 aa11.7□□□□□ -0.54
SORT1-203ENST00000471996 LINC00474Q9P2X8 69 aa11.7□□□□□ -0.54
SORT1-203ENST00000471996 GAGE12HA6NDE8 117 aa11.68□□□□□ -0.54
SORT1-203ENST00000471996 ZNF345Q14585 488 aa11.68□□□□□ -0.54
SORT1-203ENST00000471996 CYTL1Q9NRR1 136 aa11.68□□□□□ -0.54
SORT1-203ENST00000471996 HMSDA8MTL9 139 aa11.67□□□□□ -0.54
SORT1-203ENST00000471996 UBE2G2P60604 165 aa11.67□□□□□ -0.54
SORT1-203ENST00000471996 ZNF726P1Q15940 193 aa11.67□□□□□ -0.54
SORT1-203ENST00000471996 ZNF664Q8N3J9 261 aa11.67□□□□□ -0.54
SORT1-203ENST00000471996 FMC1Q96HJ9 113 aa11.67□□□□□ -0.54
SORT1-203ENST00000471996 TMEM243Q9BU79 118 aa11.67□□□□□ -0.54
SORT1-203ENST00000471996 SULT1A2P50226 295 aa11.66□□□□□ -0.54
SORT1-203ENST00000471996 LCE2AQ5TA79 106 aaPredicted RBP11.66□□□□□ -0.54
SORT1-203ENST00000471996 KCNRGQ8N5I3 272 aa11.66□□□□□ -0.54
SORT1-203ENST00000471996 PSORS1C2Q9UIG4 136 aa11.66□□□□□ -0.54
SORT1-203ENST00000471996 GVQW2A0A096LPI5 108 aaPredicted RBP11.65□□□□□ -0.54
SORT1-203ENST00000471996 MUC21A0A140T8X8 626 aa11.65□□□□□ -0.54
SORT1-203ENST00000471996 SNAI2O43623 268 aa11.65□□□□□ -0.54
SORT1-203ENST00000471996 UBE2G1P62253 170 aa11.65□□□□□ -0.54
SORT1-203ENST00000471996 SPANXN1Q5VSR9 72 aa11.65□□□□□ -0.54
SORT1-203ENST00000471996 STOML3Q8TAV4 291 aa11.65□□□□□ -0.54
SORT1-203ENST00000471996 SSBP4Q9BWG4 385 aaPredicted RBP11.65□□□□□ -0.54
SORT1-203ENST00000471996 FAM74A7A6NL05 159 aa11.64□□□□□ -0.55
SORT1-203ENST00000471996 LTAP01374 205 aa11.64□□□□□ -0.55
SORT1-203ENST00000471996 CXCL1P09341 107 aa11.64□□□□□ -0.55
SORT1-203ENST00000471996 SMIM17P0DL12 118 aa11.64□□□□□ -0.55
SORT1-203ENST00000471996 TCEAL7Q9BRU2 100 aa11.64□□□□□ -0.55
SORT1-203ENST00000471996 MAP1LC3B2A6NCE7 125 aa11.63□□□□□ -0.55
SORT1-203ENST00000471996 M0QY20 66 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms