RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, human

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD2-208	ENST00000471438	APELA	P0DMC3	54 aa		2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	COX7A1	P24310	79 aa		2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	NMU	P48645	174 aa		2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	UBE2E1	P51965	193 aa		2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	UBE2D3	P61077	147 aa		2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	UBE2D2	P62837	147 aa		2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	TCTEX1D4	Q5JR98	221 aa		2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	PAPPA-AS1	Q5QFB9	102 aa		2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	SAMD13	Q5VXD3	122 aa		2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	MORN3	Q6PF18	240 aa	Predicted RBP	2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	VMO1	Q7Z5L0	202 aa		2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	GTSCR1	Q86UQ5	136 aa		2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	MTURN	Q8N3F0	131 aa		2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	RNF152	Q8N8N0	203 aa		2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	TIMD4	Q96H15	378 aa		2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	SPAG8	Q99932	426 aa	Predicted RBP	2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	SMIM2	Q9BVW6	85 aa		2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	MRPL35	Q9NZE8	188 aa	Known RBP	2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	HILPDA	Q9Y5L2	63 aa		2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	KIF25-AS1	Q9Y6Z4	181 aa		2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	MUC4	Q99102	2169 aa		2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	ABCA1	O95477	2261 aa		2.71	□□□□□ -1.98
CSMD2-208	ENST00000471438	AKAP6	Q13023	2319 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	TMSB15B	A0A087X1C1	80 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	TRBV6-5	A0A0K0K1A5	114 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	IGIP	A6NJ69	53 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	FAM223B	A6NKX1	122 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	NCBP2L	A6PVI3	153 aa	Known RBP	2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438		H3BUA1	57 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	TRGV3	P03979	118 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	CLEC3B	P05452	202 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	CD7	P09564	240 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	GATA1	P15976	413 aa	Predicted RBP	2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	TMEM11	P17152	192 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	AZU1	P20160	251 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	HLA-DMB	P28068	263 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	POLR2K	P53803	58 aa	Known RBP	2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	DLX1	P56177	255 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	FXYD7	P58549	80 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	LINC00315	P59091	139 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	WFDC2	Q14508	124 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	TMEM78	Q5T7P6	136 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	CFAP126	Q5VTH2	177 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	C9orf139	Q6ZV77	190 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	GPHB5	Q86YW7	130 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	FAM223A	Q8IWN6	122 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	ZFAND2A	Q8N6M9	145 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438		Q8TAT8	98 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	GLMP	Q8WWB7	406 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	RASL10A	Q92737	203 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	RAB37	Q96AX2	223 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	EEF1AKMT3	Q96AZ1	226 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	TMEM141	Q96I45	108 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	ZNF479	Q96JC4	524 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	TPPP3	Q9BW30	176 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	DPH3P1	Q9H4G8	78 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	TMEM160	Q9NX00	188 aa		2.7	□□□□□ -1.98
CSMD2-208	ENST00000471438	HRNR	Q86YZ3	2850 aa	Predicted RBP	2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	TRBV20-1	A0A075B6N2	111 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	TRAV21	A0A0B4J279	112 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438		A0A0J9YX75	114 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	LYNX1	G3V0Z9	82 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	NDUFA4	O00483	81 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	IGF1	P05019	195 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	CRYGD	P07320	174 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	LGALS1	P09382	135 aa	Known RBP	2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	LYNX1	P0DP58	116 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	CRYBA4	P53673	196 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	KLRD1	Q13241	179 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	C15orf32	Q32M92	178 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	NFE4	Q86UQ8	179 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	SLC25A29	Q8N8R3	303 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	BAALC	Q8WXS3	180 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	RNF183	Q96D59	192 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	ODF3	Q96PU9	254 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	SCGB3A1	Q96QR1	104 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	METTL26	Q96S19	204 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	AMELX	Q99217	191 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	TIMM17A	Q99595	171 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	NAA38	Q9BRA0	125 aa	Known RBP	2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	TTTY13	Q9BZ97	58 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	EDA2R	Q9HAV5	297 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	NHP2	Q9NX24	153 aa	Known RBP	2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	ZAN	Q9Y493	2812 aa		2.69	□□□□□ -1.98
CSMD2-208	ENST00000471438	KIAA1109	Q2LD37	5005 aa		2.68	□□□□□ -1.98
CSMD2-208	ENST00000471438	IGLV4-69	A0A075B6H9	119 aa		2.68	□□□□□ -1.98
CSMD2-208	ENST00000471438		A0A0J9YY99	117 aa		2.68	□□□□□ -1.98
CSMD2-208	ENST00000471438	TRBV27	A0A0K0K1C4	114 aa		2.68	□□□□□ -1.98
CSMD2-208	ENST00000471438		A0A1B0GV72	72 aa		2.68	□□□□□ -1.98
CSMD2-208	ENST00000471438	C11orf86	A6NJI1	115 aa		2.68	□□□□□ -1.98
CSMD2-208	ENST00000471438	KLLN	B2CW77	178 aa		2.68	□□□□□ -1.98
CSMD2-208	ENST00000471438	OR11H12	B2RN74	326 aa		2.68	□□□□□ -1.98
CSMD2-208	ENST00000471438	C19orf84	I3L1E1	186 aa		2.68	□□□□□ -1.98
CSMD2-208	ENST00000471438		K7EMT4	169 aa		2.68	□□□□□ -1.98
CSMD2-208	ENST00000471438		K7ERJ3	54 aa		2.68	□□□□□ -1.98
CSMD2-208	ENST00000471438	LGALS9	O00182	355 aa		2.68	□□□□□ -1.98
CSMD2-208	ENST00000471438	VCY	O14598	125 aa		2.68	□□□□□ -1.98
CSMD2-208	ENST00000471438	ATP6V0E1	O15342	81 aa		2.68	□□□□□ -1.98
CSMD2-208	ENST00000471438	TSHB	P01222	138 aa		2.68	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms