RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 IGKV1OR2-108A0A075B7D4 117 aa3.14□□□□□ -1.91
CKS1B-204ENST00000471245 M0R2Z0 102 aa3.14□□□□□ -1.91
CKS1B-204ENST00000471245 CORTO00230 105 aa3.14□□□□□ -1.91
CKS1B-204ENST00000471245 ATP5G1P05496 136 aa3.14□□□□□ -1.91
CKS1B-204ENST00000471245 DEFB130BP0DP73 79 aa3.14□□□□□ -1.91
CKS1B-204ENST00000471245 DEFB130AP0DP74 79 aa3.14□□□□□ -1.91
CKS1B-204ENST00000471245 ATP5G3P48201 142 aa3.14□□□□□ -1.91
CKS1B-204ENST00000471245 PIGPP57054 158 aa3.14□□□□□ -1.91
CKS1B-204ENST00000471245 SPCS3P61009 180 aa3.14□□□□□ -1.91
CKS1B-204ENST00000471245 SNRPD3P62318 126 aaKnown RBP3.14□□□□□ -1.91
CKS1B-204ENST00000471245 PSG9Q00887 426 aa3.14□□□□□ -1.91
CKS1B-204ENST00000471245 ZNF90Q03938 601 aa3.14□□□□□ -1.91
CKS1B-204ENST00000471245 ESRGQ1W209 222 aa3.14□□□□□ -1.91
CKS1B-204ENST00000471245 OR4B1Q8NGF8 309 aa3.14□□□□□ -1.91
CKS1B-204ENST00000471245 Q8WTZ3 238 aa3.14□□□□□ -1.91
CKS1B-204ENST00000471245 S100A16Q96FQ6 103 aaKnown RBP3.14□□□□□ -1.91
CKS1B-204ENST00000471245 ACY3Q96HD9 319 aa3.14□□□□□ -1.91
CKS1B-204ENST00000471245 TMEM70Q9BUB7 260 aa3.14□□□□□ -1.91
CKS1B-204ENST00000471245 TRAV30A0A087WSZ9 112 aa3.13□□□□□ -1.91
CKS1B-204ENST00000471245 C3orf85A0A1B0GTC6 90 aa3.13□□□□□ -1.91
CKS1B-204ENST00000471245 CDS2O95674 445 aa3.13□□□□□ -1.91
CKS1B-204ENST00000471245 CD3DP04234 171 aa3.13□□□□□ -1.91
CKS1B-204ENST00000471245 PSMB3P49720 205 aa3.13□□□□□ -1.91
CKS1B-204ENST00000471245 EIF2B2P49770 351 aaKnown RBP3.13□□□□□ -1.91
CKS1B-204ENST00000471245 AKR1C2P52895 323 aa3.13□□□□□ -1.91
CKS1B-204ENST00000471245 RAB2AP61019 212 aa3.13□□□□□ -1.91
CKS1B-204ENST00000471245 RAB5BP61020 215 aa3.13□□□□□ -1.91
CKS1B-204ENST00000471245 LSM3P62310 102 aaKnown RBP3.13□□□□□ -1.91
CKS1B-204ENST00000471245 NEDD8Q15843 81 aa3.13□□□□□ -1.91
CKS1B-204ENST00000471245 NMSQ5H8A3 153 aa3.13□□□□□ -1.91
CKS1B-204ENST00000471245 DNLZQ5SXM8 178 aa3.13□□□□□ -1.91
CKS1B-204ENST00000471245 LPCAT3Q6P1A2 487 aa3.13□□□□□ -1.91
CKS1B-204ENST00000471245 COMMD7Q86VX2 200 aa3.13□□□□□ -1.91
CKS1B-204ENST00000471245 NIT1Q86X76 327 aa3.13□□□□□ -1.91
CKS1B-204ENST00000471245 SNX29P2Q8IUI4 249 aa3.13□□□□□ -1.91
CKS1B-204ENST00000471245 BAP18Q8IXM2 172 aa3.13□□□□□ -1.91
CKS1B-204ENST00000471245 ZFP82Q8N141 532 aa3.13□□□□□ -1.91
CKS1B-204ENST00000471245 OR13C8Q8NGS7 320 aa3.13□□□□□ -1.91
CKS1B-204ENST00000471245 IGF2BP2-AS1Q96M15 143 aa3.13□□□□□ -1.91
CKS1B-204ENST00000471245 MRPS16Q9Y3D3 137 aaKnown RBP3.13□□□□□ -1.91
CKS1B-204ENST00000471245 TRAV12-2A0A075B6T6 113 aa3.12□□□□□ -1.91
CKS1B-204ENST00000471245 OR5AC1P0C628 307 aa3.12□□□□□ -1.91
CKS1B-204ENST00000471245 SLC25A4P12235 298 aa3.12□□□□□ -1.91
CKS1B-204ENST00000471245 CXCL3P19876 107 aa3.12□□□□□ -1.91
CKS1B-204ENST00000471245 DDTP30046 118 aa3.12□□□□□ -1.91
CKS1B-204ENST00000471245 KRTAP10-4P60372 401 aaPredicted RBP3.12□□□□□ -1.91
CKS1B-204ENST00000471245 SUPT4H1P63272 117 aaKnown RBP3.12□□□□□ -1.91
CKS1B-204ENST00000471245 SPINK13Q1W4C9 94 aa3.12□□□□□ -1.91
CKS1B-204ENST00000471245 TMEM241Q24JQ0 296 aa3.12□□□□□ -1.91
CKS1B-204ENST00000471245 C1orf195Q5TG92 126 aa3.12□□□□□ -1.91
CKS1B-204ENST00000471245 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.12□□□□□ -1.91
CKS1B-204ENST00000471245 RNF182Q8N6D2 247 aa3.12□□□□□ -1.91
CKS1B-204ENST00000471245 OR4C16Q8NGL9 310 aa3.12□□□□□ -1.91
CKS1B-204ENST00000471245 GNPNAT1Q96EK6 184 aaPredicted RBP3.12□□□□□ -1.91
CKS1B-204ENST00000471245 PBDC1Q9BVG4 233 aa3.12□□□□□ -1.91
CKS1B-204ENST00000471245 TMEM222Q9H0R3 208 aa3.12□□□□□ -1.91
CKS1B-204ENST00000471245 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.12□□□□□ -1.91
CKS1B-204ENST00000471245 DOK5Q9P104 306 aa3.12□□□□□ -1.91
CKS1B-204ENST00000471245 COMMD3Q9UBI1 195 aa3.12□□□□□ -1.91
CKS1B-204ENST00000471245 A0A0J9YY99 117 aa3.11□□□□□ -1.91
CKS1B-204ENST00000471245 ZNF98A6NK75 572 aa3.11□□□□□ -1.91
CKS1B-204ENST00000471245 CEBPZOSA8MTT3 80 aa3.11□□□□□ -1.91
CKS1B-204ENST00000471245 GSTZ1O43708 216 aaPredicted RBP3.11□□□□□ -1.91
CKS1B-204ENST00000471245 CXorf1O96002 111 aa3.11□□□□□ -1.91
CKS1B-204ENST00000471245 CXCL2P19875 107 aa3.11□□□□□ -1.91
CKS1B-204ENST00000471245 S100GP29377 79 aa3.11□□□□□ -1.91
CKS1B-204ENST00000471245 SULT1A1P50225 295 aa3.11□□□□□ -1.91
CKS1B-204ENST00000471245 SULT1A2P50226 295 aa3.11□□□□□ -1.91
CKS1B-204ENST00000471245 TCL1AP56279 114 aa3.11□□□□□ -1.91
CKS1B-204ENST00000471245 B2MP61769 119 aa3.11□□□□□ -1.91
CKS1B-204ENST00000471245 NCS1P62166 190 aa3.11□□□□□ -1.91
CKS1B-204ENST00000471245 C1orf194Q5T5A4 169 aa3.11□□□□□ -1.91
CKS1B-204ENST00000471245 SLC25A34Q6PIV7 304 aa3.11□□□□□ -1.91
CKS1B-204ENST00000471245 TERB2Q8NHR7 220 aa3.11□□□□□ -1.91
CKS1B-204ENST00000471245 PDCD10Q9BUL8 212 aa3.11□□□□□ -1.91
CKS1B-204ENST00000471245 ENY2Q9NPA8 101 aa3.11□□□□□ -1.91
CKS1B-204ENST00000471245 COPZ2Q9P299 210 aa3.11□□□□□ -1.91
CKS1B-204ENST00000471245 A0A096LPF7 62 aa3.1□□□□□ -1.91
CKS1B-204ENST00000471245 CRYM-AS1A6NIL9 109 aa3.1□□□□□ -1.91
CKS1B-204ENST00000471245 H3BNG1 76 aa3.1□□□□□ -1.91
CKS1B-204ENST00000471245 LTAP01374 205 aa3.1□□□□□ -1.91
CKS1B-204ENST00000471245 VBP1P61758 197 aa3.1□□□□□ -1.91
CKS1B-204ENST00000471245 RNASE10Q5GAN6 216 aaKnown RBP3.1□□□□□ -1.91
CKS1B-204ENST00000471245 EBLN2Q6P2I7 272 aa3.1□□□□□ -1.91
CKS1B-204ENST00000471245 SPINT4Q6UDR6 99 aa3.1□□□□□ -1.91
CKS1B-204ENST00000471245 LYZL2Q7Z4W2 148 aa3.1□□□□□ -1.91
CKS1B-204ENST00000471245 OR8I2Q8N0Y5 310 aa3.1□□□□□ -1.91
CKS1B-204ENST00000471245 RBPMSQ93062 196 aaKnown RBP3.1□□□□□ -1.91
CKS1B-204ENST00000471245 MIXL1Q9H2W2 232 aa3.1□□□□□ -1.91
CKS1B-204ENST00000471245 NAA60Q9H7X0 242 aa3.1□□□□□ -1.91
CKS1B-204ENST00000471245 NOP10Q9NPE3 64 aaKnown RBP3.1□□□□□ -1.91
CKS1B-204ENST00000471245 RPRMQ9NS64 109 aa3.1□□□□□ -1.91
CKS1B-204ENST00000471245 TMEM56-RWDD3S4R434 201 aa3.1□□□□□ -1.91
CKS1B-204ENST00000471245 SPRR5A0A1B0GTR4 108 aa3.09□□□□□ -1.91
CKS1B-204ENST00000471245 PITX3O75364 302 aa3.09□□□□□ -1.91
CKS1B-204ENST00000471245 ATG12O94817 140 aa3.09□□□□□ -1.91
CKS1B-204ENST00000471245 SULT1A3P0DMM9 295 aa3.09□□□□□ -1.91
CKS1B-204ENST00000471245 SULT1A4P0DMN0 295 aa3.09□□□□□ -1.91
CKS1B-204ENST00000471245 ASIPP42127 132 aa3.09□□□□□ -1.91
CKS1B-204ENST00000471245 SCGB2B2Q4G0G5 96 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 204.3 ms