RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 B4DEV8 164 aa3.79□□□□□ -1.8
GPNMB-208ENST00000470994 H3BVH4 76 aa3.79□□□□□ -1.8
GPNMB-208ENST00000470994 IGLV2-8P01709 118 aa3.79□□□□□ -1.8
GPNMB-208ENST00000470994 MBP02144 154 aa3.79□□□□□ -1.8
GPNMB-208ENST00000470994 ARMS2P0C7Q2 107 aa3.79□□□□□ -1.8
GPNMB-208ENST00000470994 CFC1BP0CG36 223 aa3.79□□□□□ -1.8
GPNMB-208ENST00000470994 CFC1P0CG37 223 aa3.79□□□□□ -1.8
GPNMB-208ENST00000470994 ATP6V0CP27449 155 aa3.79□□□□□ -1.8
GPNMB-208ENST00000470994 ZFP2Q6ZN57 461 aa3.79□□□□□ -1.8
GPNMB-208ENST00000470994 SCXQ7RTU7 201 aa3.79□□□□□ -1.8
GPNMB-208ENST00000470994 OR11H4Q8NGC9 324 aa3.79□□□□□ -1.8
GPNMB-208ENST00000470994 PTH2Q96A98 100 aa3.79□□□□□ -1.8
GPNMB-208ENST00000470994 DNAJC30Q96LL9 226 aa3.79□□□□□ -1.8
GPNMB-208ENST00000470994 PHLDA3Q9Y5J5 127 aa3.79□□□□□ -1.8
GPNMB-208ENST00000470994 ARL2-SNX15V9GYD0 113 aa3.79□□□□□ -1.8
GPNMB-208ENST00000470994 RNF222A6NCQ9 220 aa3.78□□□□□ -1.8
GPNMB-208ENST00000470994 M0R381 172 aa3.78□□□□□ -1.8
GPNMB-208ENST00000470994 TPT1P13693 172 aaKnown RBP3.78□□□□□ -1.8
GPNMB-208ENST00000470994 SSTP61278 116 aa3.78□□□□□ -1.8
GPNMB-208ENST00000470994 ELOBQ15370 118 aa3.78□□□□□ -1.8
GPNMB-208ENST00000470994 LINC00299Q6ZSB3 139 aa3.78□□□□□ -1.8
GPNMB-208ENST00000470994 NIT1Q86X76 327 aa3.78□□□□□ -1.8
GPNMB-208ENST00000470994 PSMG3Q9BT73 122 aaPredicted RBP3.78□□□□□ -1.8
GPNMB-208ENST00000470994 MED28Q9H204 178 aa3.78□□□□□ -1.8
GPNMB-208ENST00000470994 TNFSF18Q9UNG2 199 aa3.78□□□□□ -1.8
GPNMB-208ENST00000470994 BORCS7-ASMTA0A0B4J1R7 106 aa3.77□□□□□ -1.81
GPNMB-208ENST00000470994 A0A1W2PRE2 83 aa3.77□□□□□ -1.81
GPNMB-208ENST00000470994 PEX7O00628 323 aa3.77□□□□□ -1.81
GPNMB-208ENST00000470994 SH2D1AO60880 128 aa3.77□□□□□ -1.81
GPNMB-208ENST00000470994 CRPP02741 224 aa3.77□□□□□ -1.81
GPNMB-208ENST00000470994 UBE2G1P62253 170 aa3.77□□□□□ -1.81
GPNMB-208ENST00000470994 SERF2P84101 59 aa3.77□□□□□ -1.81
GPNMB-208ENST00000470994 SERTAD4-AS1Q5TG53 156 aa3.77□□□□□ -1.81
GPNMB-208ENST00000470994 CST9LP1Q5W188 147 aa3.77□□□□□ -1.81
GPNMB-208ENST00000470994 C15orf54Q8N8G6 183 aa3.77□□□□□ -1.81
GPNMB-208ENST00000470994 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.77□□□□□ -1.81
GPNMB-208ENST00000470994 INO80EQ8NBZ0 244 aaPredicted RBP3.77□□□□□ -1.81
GPNMB-208ENST00000470994 CIRBP-AS1Q8TBR5 109 aa3.77□□□□□ -1.81
GPNMB-208ENST00000470994 DPH3Q96FX2 82 aa3.77□□□□□ -1.81
GPNMB-208ENST00000470994 CHAC1Q9BUX1 264 aa3.77□□□□□ -1.81
GPNMB-208ENST00000470994 IL36BQ9NZH7 164 aa3.77□□□□□ -1.81
GPNMB-208ENST00000470994 ALG5Q9Y673 324 aa3.77□□□□□ -1.81
GPNMB-208ENST00000470994 FXYD6-FXYD2A0A087WZ82 144 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 MUC21A0A0G2JKD1 596 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 MUC21A0A140T8X8 626 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 CTXND1A0A1B0GTU2 59 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 KRBOX1C9JBD0 128 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 HLA-DQA1P01909 254 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 ANGP03950 147 aaKnown RBP3.76□□□□□ -1.81
GPNMB-208ENST00000470994 LINC00694P0DN24 101 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 CRIP1P50238 77 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 Q0VG73 95 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 C14orf177Q52M58 125 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 Q5BKY6 102 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 AKR1C8PQ5T2L2 129 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 FAM162BQ5T6X4 162 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 RPL7L1Q6DKI1 246 aaKnown RBP3.76□□□□□ -1.81
GPNMB-208ENST00000470994 UFSP1Q6NVU6 142 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 Q6ZSA8 131 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 Q86TA4 180 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 ZFP82Q8N141 532 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 SUN5Q8TC36 379 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 HIST1H2BAQ96A08 127 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 ZC2HC1AQ96GY0 325 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 SFRP2Q96HF1 295 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 AQP10Q96PS8 301 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 CHCHD5Q9BSY4 110 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 ZFP30Q9Y2G7 519 aa3.76□□□□□ -1.81
GPNMB-208ENST00000470994 TRBV7-3A0A075B6L6 115 aa3.75□□□□□ -1.81
GPNMB-208ENST00000470994 FAM74A7A6NL05 159 aa3.75□□□□□ -1.81
GPNMB-208ENST00000470994 PTTG1O95997 202 aa3.75□□□□□ -1.81
GPNMB-208ENST00000470994 OXTP01178 125 aa3.75□□□□□ -1.81
GPNMB-208ENST00000470994 AKR1C3P42330 323 aa3.75□□□□□ -1.81
GPNMB-208ENST00000470994 RPL37AP61513 92 aaKnown RBP3.75□□□□□ -1.81
GPNMB-208ENST00000470994 GAGE6Q13070 117 aa3.75□□□□□ -1.81
GPNMB-208ENST00000470994 ZNF56Q15929 161 aa3.75□□□□□ -1.81
GPNMB-208ENST00000470994 ZNF726P1Q15940 193 aa3.75□□□□□ -1.81
GPNMB-208ENST00000470994 STOML3Q8TAV4 291 aa3.75□□□□□ -1.81
GPNMB-208ENST00000470994 NKX6-2Q9C056 277 aaPredicted RBP3.75□□□□□ -1.81
GPNMB-208ENST00000470994 FAT1Q14517 4588 aa3.74□□□□□ -1.81
GPNMB-208ENST00000470994 TRBV6-8A0A0A6YYG3 113 aa3.74□□□□□ -1.81
GPNMB-208ENST00000470994 TRBV10-1A0A0K0K1A3 114 aa3.74□□□□□ -1.81
GPNMB-208ENST00000470994 A0A1B0GV50 99 aa3.74□□□□□ -1.81
GPNMB-208ENST00000470994 MAP1LC3B2A6NCE7 125 aa3.74□□□□□ -1.81
GPNMB-208ENST00000470994 USP17L23D6RBM5 183 aa3.74□□□□□ -1.81
GPNMB-208ENST00000470994 UBE2D3P61077 147 aa3.74□□□□□ -1.81
GPNMB-208ENST00000470994 UBE2D2P62837 147 aa3.74□□□□□ -1.81
GPNMB-208ENST00000470994 SPANXN1Q5VSR9 72 aa3.74□□□□□ -1.81
GPNMB-208ENST00000470994 CLPSL2Q6UWE3 100 aa3.74□□□□□ -1.81
GPNMB-208ENST00000470994 ENHOQ6UWT2 76 aa3.74□□□□□ -1.81
GPNMB-208ENST00000470994 FMC1Q96HJ9 113 aa3.74□□□□□ -1.81
GPNMB-208ENST00000470994 CHCHD7Q9BUK0 85 aa3.74□□□□□ -1.81
GPNMB-208ENST00000470994 ZNF471Q9BX82 626 aaPredicted RBP3.74□□□□□ -1.81
GPNMB-208ENST00000470994 MAP1LC3BQ9GZQ8 125 aa3.74□□□□□ -1.81
GPNMB-208ENST00000470994 SRRM2Q9UQ35 2752 aaKnown RBP3.74□□□□□ -1.81
GPNMB-208ENST00000470994 PAGE4O60829 102 aa3.73□□□□□ -1.81
GPNMB-208ENST00000470994 PRSS1P07477 247 aa3.73□□□□□ -1.81
GPNMB-208ENST00000470994 SMIM17P0DL12 118 aa3.73□□□□□ -1.81
GPNMB-208ENST00000470994 RAB5CP51148 216 aa3.73□□□□□ -1.81
GPNMB-208ENST00000470994 RAB4BP61018 213 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms