RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 TRBV10-1A0A0K0K1A3 114 aa6.16□□□□□ -1.42
HDLBP-233ENST00000470710 K7EQD1 137 aa6.16□□□□□ -1.42
HDLBP-233ENST00000470710 ESDP10768 282 aa6.16□□□□□ -1.42
HDLBP-233ENST00000470710 LINC00310P59036 64 aa6.16□□□□□ -1.42
HDLBP-233ENST00000470710 SUMO2P61956 95 aaKnown RBP6.16□□□□□ -1.42
HDLBP-233ENST00000470710 FHL2Q14192 279 aa6.16□□□□□ -1.42
HDLBP-233ENST00000470710 DNAJC30Q96LL9 226 aa6.16□□□□□ -1.42
HDLBP-233ENST00000470710 ST20Q9HBF5 79 aa6.16□□□□□ -1.42
HDLBP-233ENST00000470710 NXT2Q9NPJ8 142 aaKnown RBP6.16□□□□□ -1.42
HDLBP-233ENST00000470710 NIT2Q9NQR4 276 aa6.16□□□□□ -1.42
HDLBP-233ENST00000470710 IGLV2-18A0A075B6J9 118 aa6.15□□□□□ -1.42
HDLBP-233ENST00000470710 TRGV4A0A0C4DH28 118 aa6.15□□□□□ -1.42
HDLBP-233ENST00000470710 A0A0J9YWU9 116 aa6.15□□□□□ -1.42
HDLBP-233ENST00000470710 TRBV6-4A0A1B0GX49 114 aa6.15□□□□□ -1.42
HDLBP-233ENST00000470710 LINC01546A6NGU7 62 aa6.15□□□□□ -1.42
HDLBP-233ENST00000470710 C5orf52A6NGY3 159 aa6.15□□□□□ -1.42
HDLBP-233ENST00000470710 SERF1AO75920 110 aa6.15□□□□□ -1.42
HDLBP-233ENST00000470710 ATP5G1P05496 136 aa6.15□□□□□ -1.42
HDLBP-233ENST00000470710 NHLRC4P0CG21 123 aaPredicted RBP6.15□□□□□ -1.42
HDLBP-233ENST00000470710 PMCHP20382 165 aa6.15□□□□□ -1.42
HDLBP-233ENST00000470710 HOXA5P20719 270 aa6.15□□□□□ -1.42
HDLBP-233ENST00000470710 POLR2KP53803 58 aaKnown RBP6.15□□□□□ -1.42
HDLBP-233ENST00000470710 DEFA6Q01524 100 aa6.15□□□□□ -1.42
HDLBP-233ENST00000470710 C12orf74Q32Q52 190 aa6.15□□□□□ -1.42
HDLBP-233ENST00000470710 NIT1Q86X76 327 aa6.15□□□□□ -1.42
HDLBP-233ENST00000470710 Q8N8P6 123 aa6.15□□□□□ -1.42
HDLBP-233ENST00000470710 SLC25A29Q8N8R3 303 aa6.15□□□□□ -1.42
HDLBP-233ENST00000470710 NEXN-AS1Q8NBZ9 246 aa6.15□□□□□ -1.42
HDLBP-233ENST00000470710 CHCHD1Q96BP2 118 aaKnown RBP6.15□□□□□ -1.42
HDLBP-233ENST00000470710 URB1-AS1Q96HZ7 61 aa6.15□□□□□ -1.42
HDLBP-233ENST00000470710 SMIM2Q9BVW6 85 aa6.15□□□□□ -1.42
HDLBP-233ENST00000470710 MEGF8Q7Z7M0 2845 aa6.15□□□□□ -1.43
HDLBP-233ENST00000470710 TRBV27A0A0K0K1C4 114 aa6.14□□□□□ -1.43
HDLBP-233ENST00000470710 LOC389332A0A1B0GUA5 103 aa6.14□□□□□ -1.43
HDLBP-233ENST00000470710 SDHAF1A6NFY7 115 aa6.14□□□□□ -1.43
HDLBP-233ENST00000470710 LINC00614P0C842 121 aa6.14□□□□□ -1.43
HDLBP-233ENST00000470710 P0DMU3 169 aa6.14□□□□□ -1.43
HDLBP-233ENST00000470710 FAM231AP0DMU4 169 aa6.14□□□□□ -1.43
HDLBP-233ENST00000470710 FAM231CP0DMU5 169 aa6.14□□□□□ -1.43
HDLBP-233ENST00000470710 IFI27P40305 119 aaPredicted RBP6.14□□□□□ -1.43
HDLBP-233ENST00000470710 SNRPEP62304 92 aaKnown RBP6.14□□□□□ -1.43
HDLBP-233ENST00000470710 RHOHQ15669 191 aa6.14□□□□□ -1.43
HDLBP-233ENST00000470710 FA2HQ7L5A8 372 aa6.14□□□□□ -1.43
HDLBP-233ENST00000470710 PRSS3P2Q8NHM4 247 aa6.14□□□□□ -1.43
HDLBP-233ENST00000470710 TMEM70Q9BUB7 260 aa6.14□□□□□ -1.43
HDLBP-233ENST00000470710 PRO0255Q9UI72 69 aa6.14□□□□□ -1.43
HDLBP-233ENST00000470710 PRKDCP78527 4128 aaKnown RBP6.14□□□□□ -1.43
HDLBP-233ENST00000470710 NACAE9PAV3 2078 aa6.14□□□□□ -1.43
HDLBP-233ENST00000470710 K7EMI3 77 aa6.13□□□□□ -1.43
HDLBP-233ENST00000470710 VCYO14598 125 aa6.13□□□□□ -1.43
HDLBP-233ENST00000470710 NUPR1O60356 82 aa6.13□□□□□ -1.43
HDLBP-233ENST00000470710 RNASEKQ6P5S7 137 aaKnown RBP6.13□□□□□ -1.43
HDLBP-233ENST00000470710 HIST3H2BBQ8N257 126 aa6.13□□□□□ -1.43
HDLBP-233ENST00000470710 PRADC1Q9BSG0 188 aa6.13□□□□□ -1.43
HDLBP-233ENST00000470710 AP5S1Q9NUS5 200 aa6.13□□□□□ -1.43
HDLBP-233ENST00000470710 HHLA3Q9XRX5 114 aa6.13□□□□□ -1.43
HDLBP-233ENST00000470710 TNFRSF18Q9Y5U5 241 aa6.13□□□□□ -1.43
HDLBP-233ENST00000470710 STAB2Q8WWQ8 2551 aa6.12□□□□□ -1.43
HDLBP-233ENST00000470710 TRBV7-3A0A075B6L6 115 aa6.12□□□□□ -1.43
HDLBP-233ENST00000470710 TCAPO15273 167 aa6.12□□□□□ -1.43
HDLBP-233ENST00000470710 HSBP1O75506 76 aa6.12□□□□□ -1.43
HDLBP-233ENST00000470710 LINC00694P0DN24 101 aa6.12□□□□□ -1.43
HDLBP-233ENST00000470710 CRYBA4P53673 196 aa6.12□□□□□ -1.43
HDLBP-233ENST00000470710 RPL36AP83881 106 aaKnown RBP6.12□□□□□ -1.43
HDLBP-233ENST00000470710 C11orf45Q8TAV5 145 aa6.12□□□□□ -1.43
HDLBP-233ENST00000470710 RPL36ALQ969Q0 106 aaKnown RBP6.12□□□□□ -1.43
HDLBP-233ENST00000470710 PACRGQ96M98 296 aaPredicted RBP6.12□□□□□ -1.43
HDLBP-233ENST00000470710 Q9UF83 564 aa6.12□□□□□ -1.43
HDLBP-233ENST00000470710 I3L3M4 83 aa6.11□□□□□ -1.43
HDLBP-233ENST00000470710 PAX4O43316 350 aa6.11□□□□□ -1.43
HDLBP-233ENST00000470710 UBE2D3P61077 147 aa6.11□□□□□ -1.43
HDLBP-233ENST00000470710 UBE2D2P62837 147 aa6.11□□□□□ -1.43
HDLBP-233ENST00000470710 LAGE3Q14657 143 aa6.11□□□□□ -1.43
HDLBP-233ENST00000470710 ORMDL2Q53FV1 153 aa6.11□□□□□ -1.43
HDLBP-233ENST00000470710 DAZ4Q86SG3 579 aaKnown RBP6.11□□□□□ -1.43
HDLBP-233ENST00000470710 ZNRF2Q8NHG8 242 aa6.11□□□□□ -1.43
HDLBP-233ENST00000470710 KIR2DL4Q99706 377 aa6.11□□□□□ -1.43
HDLBP-233ENST00000470710 DAZ3Q9NR90 486 aaKnown RBP6.11□□□□□ -1.43
HDLBP-233ENST00000470710 IGHV1-24A0A0C4DH33 117 aa6.1□□□□□ -1.43
HDLBP-233ENST00000470710 GAGE12JA6NER3 117 aa6.1□□□□□ -1.43
HDLBP-233ENST00000470710 IFITM10A6NMD0 228 aa6.1□□□□□ -1.43
HDLBP-233ENST00000470710 F5H768 121 aa6.1□□□□□ -1.43
HDLBP-233ENST00000470710 TSHBP01222 138 aa6.1□□□□□ -1.43
HDLBP-233ENST00000470710 GYPEP15421 78 aa6.1□□□□□ -1.43
HDLBP-233ENST00000470710 S100A2P29034 98 aa6.1□□□□□ -1.43
HDLBP-233ENST00000470710 AMTP48728 403 aa6.1□□□□□ -1.43
HDLBP-233ENST00000470710 NANOS2P60321 138 aaKnown RBP6.1□□□□□ -1.43
HDLBP-233ENST00000470710 GAGE1Q13065 139 aa6.1□□□□□ -1.43
HDLBP-233ENST00000470710 GAGE4Q13068 117 aa6.1□□□□□ -1.43
HDLBP-233ENST00000470710 GAGE5Q13069 117 aa6.1□□□□□ -1.43
HDLBP-233ENST00000470710 GAGE13Q4V321 117 aa6.1□□□□□ -1.43
HDLBP-233ENST00000470710 PDZD11Q5EBL8 140 aa6.1□□□□□ -1.43
HDLBP-233ENST00000470710 Q6ZTC4 211 aa6.1□□□□□ -1.43
HDLBP-233ENST00000470710 NEGR1Q7Z3B1 354 aa6.1□□□□□ -1.43
HDLBP-233ENST00000470710 TMEM18Q96B42 140 aa6.1□□□□□ -1.43
HDLBP-233ENST00000470710 VSIG2Q96IQ7 327 aa6.1□□□□□ -1.43
HDLBP-233ENST00000470710 HIST1H2BLQ99880 126 aa6.1□□□□□ -1.43
HDLBP-233ENST00000470710 TRAV26-1A0A087WT03 109 aa6.09□□□□□ -1.43
HDLBP-233ENST00000470710 LOC100131303A0A0U1RQF7 123 aa6.09□□□□□ -1.43
HDLBP-233ENST00000470710 H3BNG1 76 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms