RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 UQCR10Q9UDW1 63 aa12.66□□□□□ -0.38
MRPL28-208ENST00000469744 IGLV2-18A0A075B6J9 118 aa12.65□□□□□ -0.38
MRPL28-208ENST00000469744 GNRH2O43555 120 aa12.65□□□□□ -0.38
MRPL28-208ENST00000469744 LY6G6CO95867 125 aa12.65□□□□□ -0.38
MRPL28-208ENST00000469744 RBMY1A1P0DJD3 496 aaKnown RBP12.65□□□□□ -0.38
MRPL28-208ENST00000469744 RBMY1CP0DJD4 496 aa12.65□□□□□ -0.38
MRPL28-208ENST00000469744 RBMY1FQ15415 496 aaKnown RBP12.65□□□□□ -0.38
MRPL28-208ENST00000469744 CSNK1G2-AS1Q8NCQ2 148 aa12.65□□□□□ -0.38
MRPL28-208ENST00000469744 AP1S3Q96PC3 154 aa12.65□□□□□ -0.38
MRPL28-208ENST00000469744 KLK5Q9Y337 293 aaPredicted RBP12.65□□□□□ -0.38
MRPL28-208ENST00000469744 X6R8D5 127 aa12.65□□□□□ -0.38
MRPL28-208ENST00000469744 PPP1R17O96001 155 aa12.65□□□□□ -0.38
MRPL28-208ENST00000469744 IGLC3P0DOY3 106 aa12.65□□□□□ -0.38
MRPL28-208ENST00000469744 HLA-DRB4P13762 266 aa12.65□□□□□ -0.38
MRPL28-208ENST00000469744 FCER1GP30273 86 aa12.65□□□□□ -0.38
MRPL28-208ENST00000469744 FXYD7P58549 80 aa12.65□□□□□ -0.38
MRPL28-208ENST00000469744 AMTNQ6UX39 209 aa12.65□□□□□ -0.38
MRPL28-208ENST00000469744 HLA-DRB4X5D2U9 266 aa12.65□□□□□ -0.38
MRPL28-208ENST00000469744 TRAV12-3A0A0B4J271 114 aa12.64□□□□□ -0.39
MRPL28-208ENST00000469744 C20orf78Q9BR46 151 aa12.64□□□□□ -0.39
MRPL28-208ENST00000469744 TIMM8BQ9Y5J9 83 aaPredicted RBP12.64□□□□□ -0.39
MRPL28-208ENST00000469744 K7EMI3 77 aa12.63□□□□□ -0.39
MRPL28-208ENST00000469744 GAS8-AS1O95177 125 aa12.63□□□□□ -0.39
MRPL28-208ENST00000469744 LGALS9BQ3B8N2 356 aa12.63□□□□□ -0.39
MRPL28-208ENST00000469744 LGALS9CQ6DKI2 356 aa12.63□□□□□ -0.39
MRPL28-208ENST00000469744 C9orf85Q96MD7 179 aa12.63□□□□□ -0.39
MRPL28-208ENST00000469744 C2orf88Q9BSF0 95 aa12.63□□□□□ -0.39
MRPL28-208ENST00000469744 ST20Q9HBF5 79 aa12.63□□□□□ -0.39
MRPL28-208ENST00000469744 IGHV1OR15-1A0A075B7D0 117 aa12.62□□□□□ -0.39
MRPL28-208ENST00000469744 MIFP14174 115 aa12.62□□□□□ -0.39
MRPL28-208ENST00000469744 NUTF2P61970 127 aaKnown RBP12.62□□□□□ -0.39
MRPL28-208ENST00000469744 CLUHP3Q96NS8 147 aa12.62□□□□□ -0.39
MRPL28-208ENST00000469744 IGHV3-16A0A0C4DH30 117 aa12.61□□□□□ -0.39
MRPL28-208ENST00000469744 M0R143 59 aa12.61□□□□□ -0.39
MRPL28-208ENST00000469744 GATA1P15976 413 aaPredicted RBP12.61□□□□□ -0.39
MRPL28-208ENST00000469744 ATOH7Q8N100 152 aa12.61□□□□□ -0.39
MRPL28-208ENST00000469744 KIF25-AS1Q9Y6Z4 181 aa12.61□□□□□ -0.39
MRPL28-208ENST00000469744 HSBP1L1C9JCN9 74 aa12.6□□□□□ -0.39
MRPL28-208ENST00000469744 SYT8Q8NBV8 401 aa12.6□□□□□ -0.39
MRPL28-208ENST00000469744 IFI27L1Q96BM0 104 aa12.6□□□□□ -0.39
MRPL28-208ENST00000469744 C1QTNF4Q9BXJ3 329 aa12.6□□□□□ -0.39
MRPL28-208ENST00000469744 TRGV11A0A075B6L2 103 aa12.59□□□□□ -0.39
MRPL28-208ENST00000469744 RPL32P62910 135 aaKnown RBP12.59□□□□□ -0.39
MRPL28-208ENST00000469744 SPINK13Q1W4C9 94 aa12.59□□□□□ -0.39
MRPL28-208ENST00000469744 C14orf178Q8N769 122 aaPredicted RBP12.59□□□□□ -0.39
MRPL28-208ENST00000469744 CELA1Q9UNI1 258 aa12.59□□□□□ -0.39
MRPL28-208ENST00000469744 MUC4Q99102 2169 aa12.59□□□□□ -0.39
MRPL28-208ENST00000469744 IGHV3OR16-12A0A075B7B8 117 aa12.59□□□□□ -0.39
MRPL28-208ENST00000469744 SMIM17P0DL12 118 aa12.59□□□□□ -0.39
MRPL28-208ENST00000469744 LAGE3Q14657 143 aa12.59□□□□□ -0.39
MRPL28-208ENST00000469744 SMIM2Q9BVW6 85 aa12.59□□□□□ -0.39
MRPL28-208ENST00000469744 EPPK1P58107 5090 aaKnown RBP12.58□□□□□ -0.39
MRPL28-208ENST00000469744 LINC00315P59091 139 aa12.58□□□□□ -0.4
MRPL28-208ENST00000469744 RASL10AQ92737 203 aa12.58□□□□□ -0.4
MRPL28-208ENST00000469744 TRAV12-2A0A075B6T6 113 aa12.57□□□□□ -0.4
MRPL28-208ENST00000469744 TRAV26-2A0A0B4J265 109 aa12.57□□□□□ -0.4
MRPL28-208ENST00000469744 ATP5LO75964 103 aa12.57□□□□□ -0.4
MRPL28-208ENST00000469744 SUMO2P61956 95 aaKnown RBP12.57□□□□□ -0.4
MRPL28-208ENST00000469744 MAJINQ3KP22 176 aa12.57□□□□□ -0.4
MRPL28-208ENST00000469744 Q6ZTC4 211 aa12.57□□□□□ -0.4
MRPL28-208ENST00000469744 LINC00467Q9BRT7 94 aa12.57□□□□□ -0.4
MRPL28-208ENST00000469744 SNHG12Q9BXW3 62 aa12.57□□□□□ -0.4
MRPL28-208ENST00000469744 ORMDL2Q53FV1 153 aa12.56□□□□□ -0.4
MRPL28-208ENST00000469744 MRPS16Q9Y3D3 137 aaKnown RBP12.56□□□□□ -0.4
MRPL28-208ENST00000469744 IGLL5B9A064 214 aa12.55□□□□□ -0.4
MRPL28-208ENST00000469744 MGPP08493 103 aa12.55□□□□□ -0.4
MRPL28-208ENST00000469744 HNRNPA3P51991 378 aaKnown RBP12.55□□□□□ -0.4
MRPL28-208ENST00000469744 GOLT1BQ9Y3E0 138 aa12.55□□□□□ -0.4
MRPL28-208ENST00000469744 EREGO14944 169 aa12.54□□□□□ -0.4
MRPL28-208ENST00000469744 EMP1P54849 157 aa12.54□□□□□ -0.4
MRPL28-208ENST00000469744 PIK3CD-AS1Q5SR53 167 aa12.54□□□□□ -0.4
MRPL28-208ENST00000469744 Q6ZN92 141 aa12.54□□□□□ -0.4
MRPL28-208ENST00000469744 PTH2Q96A98 100 aa12.54□□□□□ -0.4
MRPL28-208ENST00000469744 LINC01549A6NIU2 74 aa12.53□□□□□ -0.4
MRPL28-208ENST00000469744 PMCHL2Q9BQD1 86 aa12.53□□□□□ -0.4
MRPL28-208ENST00000469744 MDFICQ9P1T7 246 aa12.53□□□□□ -0.4
MRPL28-208ENST00000469744 TRBV6-5A0A0K0K1A5 114 aa12.53□□□□□ -0.4
MRPL28-208ENST00000469744 hDV102S1A0JD36 115 aa12.53□□□□□ -0.4
MRPL28-208ENST00000469744 H0Y8G0 127 aa12.53□□□□□ -0.4
MRPL28-208ENST00000469744 G0S2P27469 103 aa12.53□□□□□ -0.4
MRPL28-208ENST00000469744 C12orf74Q32Q52 190 aa12.53□□□□□ -0.4
MRPL28-208ENST00000469744 TRAV10A0A0B4J240 114 aa12.52□□□□□ -0.41
MRPL28-208ENST00000469744 C1orf158Q8N1D5 194 aa12.52□□□□□ -0.41
MRPL28-208ENST00000469744 RPL39LQ96EH5 51 aaKnown RBP12.51□□□□□ -0.41
MRPL28-208ENST00000469744 CBY3A6NI87 242 aa12.5□□□□□ -0.41
MRPL28-208ENST00000469744 TCAPO15273 167 aa12.5□□□□□ -0.41
MRPL28-208ENST00000469744 NUDT3O95989 172 aa12.5□□□□□ -0.41
MRPL28-208ENST00000469744 SUMO4Q6EEV6 95 aa12.5□□□□□ -0.41
MRPL28-208ENST00000469744 SLC25A34Q6PIV7 304 aa12.5□□□□□ -0.41
MRPL28-208ENST00000469744 APLNQ9ULZ1 77 aa12.5□□□□□ -0.41
MRPL28-208ENST00000469744 KMT2AQ03164 3969 aa12.49□□□□□ -0.41
MRPL28-208ENST00000469744 CRYGDP07320 174 aa12.49□□□□□ -0.41
MRPL28-208ENST00000469744 POLR2KP53803 58 aaKnown RBP12.49□□□□□ -0.41
MRPL28-208ENST00000469744 TOMM6Q96B49 74 aa12.49□□□□□ -0.41
MRPL28-208ENST00000469744 DEFB131BA0A096LNP1 70 aa12.48□□□□□ -0.41
MRPL28-208ENST00000469744 SMIM9A6NGZ8 99 aa12.48□□□□□ -0.41
MRPL28-208ENST00000469744 VCYO14598 125 aa12.48□□□□□ -0.41
MRPL28-208ENST00000469744 INSP01308 110 aa12.48□□□□□ -0.41
MRPL28-208ENST00000469744 PRM2P04554 102 aa12.48□□□□□ -0.41
MRPL28-208ENST00000469744 COX8AP10176 69 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms