RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 PSMB8P28062 276 aa7.07□□□□□ -1.28
TOP3A-203ENST00000469739 RBAKDNA6NC62 111 aa7.07□□□□□ -1.28
TOP3A-203ENST00000469739 SOCS3O14543 225 aa7.07□□□□□ -1.28
TOP3A-203ENST00000469739 TRAV21A0A0B4J279 112 aa7.06□□□□□ -1.28
TOP3A-203ENST00000469739 FHL3Q13643 280 aa7.06□□□□□ -1.28
TOP3A-203ENST00000469739 ATP6V0E2Q8NHE4 81 aa7.06□□□□□ -1.28
TOP3A-203ENST00000469739 HOXD3P31249 432 aaPredicted RBP7.06□□□□□ -1.28
TOP3A-203ENST00000469739 ASIPP42127 132 aa7.06□□□□□ -1.28
TOP3A-203ENST00000469739 EMP1P54849 157 aa7.06□□□□□ -1.28
TOP3A-203ENST00000469739 RRN3P1Q2M238 152 aa7.06□□□□□ -1.28
TOP3A-203ENST00000469739 GTSCR1Q86UQ5 136 aa7.06□□□□□ -1.28
TOP3A-203ENST00000469739 U3KQK5 164 aa7.06□□□□□ -1.28
TOP3A-203ENST00000469739 A0A096LNT2 108 aa7.06□□□□□ -1.28
TOP3A-203ENST00000469739 IGHV3-73A0A0B4J1V6 119 aa7.06□□□□□ -1.28
TOP3A-203ENST00000469739 KNCNA6PVL3 124 aa7.06□□□□□ -1.28
TOP3A-203ENST00000469739 FAM159AQ6UWV7 190 aa7.06□□□□□ -1.28
TOP3A-203ENST00000469739 COX8CQ7Z4L0 72 aa7.06□□□□□ -1.28
TOP3A-203ENST00000469739 NFE4Q86UQ8 179 aa7.06□□□□□ -1.28
TOP3A-203ENST00000469739 SMIM20Q8N5G0 67 aa7.06□□□□□ -1.28
TOP3A-203ENST00000469739 VPREB3Q9UKI3 123 aa7.06□□□□□ -1.28
TOP3A-203ENST00000469739 HHLA3Q9XRX5 114 aa7.06□□□□□ -1.28
TOP3A-203ENST00000469739 OVOL1O14753 267 aa7.05□□□□□ -1.28
TOP3A-203ENST00000469739 ZC2HC1BQ5TFG8 222 aa7.05□□□□□ -1.28
TOP3A-203ENST00000469739 ZFAND6Q6FIF0 208 aa7.05□□□□□ -1.28
TOP3A-203ENST00000469739 GATD1Q8NB37 220 aa7.05□□□□□ -1.28
TOP3A-203ENST00000469739 MDFICQ9P1T7 246 aa7.05□□□□□ -1.28
TOP3A-203ENST00000469739 ATRQ13535 2644 aa7.05□□□□□ -1.28
TOP3A-203ENST00000469739 RPL32P62910 135 aaKnown RBP7.05□□□□□ -1.28
TOP3A-203ENST00000469739 DEFB113Q30KQ7 82 aa7.05□□□□□ -1.28
TOP3A-203ENST00000469739 PSMG3-AS1Q96PY0 264 aa7.05□□□□□ -1.28
TOP3A-203ENST00000469739 CRIP2P52943 208 aaPredicted RBP7.04□□□□□ -1.28
TOP3A-203ENST00000469739 DSCR9P59020 149 aa7.04□□□□□ -1.28
TOP3A-203ENST00000469739 CFHR3Q02985 330 aa7.04□□□□□ -1.28
TOP3A-203ENST00000469739 TEX29Q8N6K0 151 aa7.04□□□□□ -1.28
TOP3A-203ENST00000469739 DCANP1Q8TF63 244 aa7.04□□□□□ -1.28
TOP3A-203ENST00000469739 FCER1GP30273 86 aa7.04□□□□□ -1.28
TOP3A-203ENST00000469739 CFAP126Q5VTH2 177 aa7.04□□□□□ -1.28
TOP3A-203ENST00000469739 RNASE3P12724 160 aaKnown RBP7.04□□□□□ -1.28
TOP3A-203ENST00000469739 TAL2Q16559 108 aa7.04□□□□□ -1.28
TOP3A-203ENST00000469739 NRACQ8N912 160 aa7.04□□□□□ -1.28
TOP3A-203ENST00000469739 HIST1H4GQ99525 98 aa7.04□□□□□ -1.28
TOP3A-203ENST00000469739 VWFP04275 2813 aa7.03□□□□□ -1.28
TOP3A-203ENST00000469739 IGKCP01834 107 aa7.03□□□□□ -1.28
TOP3A-203ENST00000469739 SMCPP49901 116 aaPredicted RBP7.03□□□□□ -1.28
TOP3A-203ENST00000469739 CNFNQ9BYD5 112 aa7.03□□□□□ -1.28
TOP3A-203ENST00000469739 ZNF702PQ9H963 129 aa7.03□□□□□ -1.28
TOP3A-203ENST00000469739 MRPL35Q9NZE8 188 aaKnown RBP7.03□□□□□ -1.28
TOP3A-203ENST00000469739 ZNF256Q9Y2P7 627 aaPredicted RBP7.03□□□□□ -1.28
TOP3A-203ENST00000469739 OTOGQ6ZRI0 2925 aa7.03□□□□□ -1.28
TOP3A-203ENST00000469739 J3QL48 77 aa7.03□□□□□ -1.28
TOP3A-203ENST00000469739 TNFRSF18Q9Y5U5 241 aa7.03□□□□□ -1.28
TOP3A-203ENST00000469739 TEP1Q99973 2627 aaKnown RBP7.02□□□□□ -1.29
TOP3A-203ENST00000469739 DEFB131AP59861 70 aa7.02□□□□□ -1.29
TOP3A-203ENST00000469739 APRG1Q8IVJ8 170 aa7.02□□□□□ -1.29
TOP3A-203ENST00000469739 STHQ8IWL8 128 aa7.02□□□□□ -1.29
TOP3A-203ENST00000469739 MRPL53Q96EL3 112 aaKnown RBP7.02□□□□□ -1.29
TOP3A-203ENST00000469739 IGHV3OR16-12A0A075B7B8 117 aa7.02□□□□□ -1.29
TOP3A-203ENST00000469739 NHLRC4P0CG21 123 aaPredicted RBP7.02□□□□□ -1.29
TOP3A-203ENST00000469739 LAGE3Q14657 143 aa7.02□□□□□ -1.29
TOP3A-203ENST00000469739 PPDPFLQ8WWR9 84 aa7.02□□□□□ -1.29
TOP3A-203ENST00000469739 RASL10AQ92737 203 aa7.02□□□□□ -1.29
TOP3A-203ENST00000469739 DLX4Q92988 240 aaPredicted RBP7.02□□□□□ -1.29
TOP3A-203ENST00000469739 NXT2Q9NPJ8 142 aaKnown RBP7.02□□□□□ -1.29
TOP3A-203ENST00000469739 PDZD2O15018 2839 aa7.02□□□□□ -1.29
TOP3A-203ENST00000469739 H3BUA1 57 aa7.02□□□□□ -1.29
TOP3A-203ENST00000469739 SNRPD3P62318 126 aaKnown RBP7.02□□□□□ -1.29
TOP3A-203ENST00000469739 Q6YL49 198 aa7.02□□□□□ -1.29
TOP3A-203ENST00000469739 Q8N8P6 123 aa7.02□□□□□ -1.29
TOP3A-203ENST00000469739 MYOZ3Q8TDC0 251 aa7.02□□□□□ -1.29
TOP3A-203ENST00000469739 PTH2Q96A98 100 aa7.02□□□□□ -1.29
TOP3A-203ENST00000469739 MAPKAPK5-AS1Q8N8E1 139 aa7.01□□□□□ -1.29
TOP3A-203ENST00000469739 KLHL30-AS1Q8NEE0 82 aa7.01□□□□□ -1.29
TOP3A-203ENST00000469739 GAGE12JA6NER3 117 aa7.01□□□□□ -1.29
TOP3A-203ENST00000469739 GAGE7O76087 117 aa7.01□□□□□ -1.29
TOP3A-203ENST00000469739 GAGE12FP0CL80 117 aa7.01□□□□□ -1.29
TOP3A-203ENST00000469739 GAGE12GP0CL81 117 aa7.01□□□□□ -1.29
TOP3A-203ENST00000469739 GAGE12IP0CL82 117 aa7.01□□□□□ -1.29
TOP3A-203ENST00000469739 SUMO2P61956 95 aaKnown RBP7.01□□□□□ -1.29
TOP3A-203ENST00000469739 GAGE4Q13068 117 aa7.01□□□□□ -1.29
TOP3A-203ENST00000469739 Q8N1Y9 231 aa7.01□□□□□ -1.29
TOP3A-203ENST00000469739 CARD19Q96LW7 228 aa7.01□□□□□ -1.29
TOP3A-203ENST00000469739 CCL24O00175 119 aa7□□□□□ -1.29
TOP3A-203ENST00000469739 DPM2O94777 84 aa7□□□□□ -1.29
TOP3A-203ENST00000469739 HLA-DRB4P13762 266 aa7□□□□□ -1.29
TOP3A-203ENST00000469739 ZNF56Q15929 161 aa7□□□□□ -1.29
TOP3A-203ENST00000469739 DPH3P1Q9H4G8 78 aa7□□□□□ -1.29
TOP3A-203ENST00000469739 HLA-DRB4X5D2U9 266 aa7□□□□□ -1.29
TOP3A-203ENST00000469739 IGLV2-18A0A075B6J9 118 aa7□□□□□ -1.29
TOP3A-203ENST00000469739 LGALS1P09382 135 aaKnown RBP7□□□□□ -1.29
TOP3A-203ENST00000469739 PSMB2P49721 201 aa7□□□□□ -1.29
TOP3A-203ENST00000469739 RPL39P62891 51 aaKnown RBP7□□□□□ -1.29
TOP3A-203ENST00000469739 MORN3Q6PF18 240 aaPredicted RBP7□□□□□ -1.29
TOP3A-203ENST00000469739 RAX2Q96IS3 184 aa7□□□□□ -1.29
TOP3A-203ENST00000469739 SCGB3A1Q96QR1 104 aa7□□□□□ -1.29
TOP3A-203ENST00000469739 SMIM2Q9BVW6 85 aa7□□□□□ -1.29
TOP3A-203ENST00000469739 TEN1Q86WV5 123 aa7□□□□□ -1.29
TOP3A-203ENST00000469739 TMEM61Q8N0U2 210 aa7□□□□□ -1.29
TOP3A-203ENST00000469739 PROK1P58294 105 aa6.99□□□□□ -1.29
TOP3A-203ENST00000469739 SMR3AQ99954 134 aa6.99□□□□□ -1.29
TOP3A-203ENST00000469739 LOC107984156A0A0G2JMH3 177 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms