RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 DEFB104AQ8WTQ1 72 aa7.21□□□□□ -1.26
COL4A3-204ENST00000469504 C1orf43Q9BWL3 253 aa7.21□□□□□ -1.26
COL4A3-204ENST00000469504 FLG2Q5D862 2391 aaPredicted RBP7.21□□□□□ -1.26
COL4A3-204ENST00000469504 TMEM262E9PQX1 116 aa7.2□□□□□ -1.26
COL4A3-204ENST00000469504 BCL2L11O43521 198 aa7.2□□□□□ -1.26
COL4A3-204ENST00000469504 H2AFB1P0C5Y9 115 aa7.2□□□□□ -1.26
COL4A3-204ENST00000469504 SMIM17P0DL12 118 aa7.2□□□□□ -1.26
COL4A3-204ENST00000469504 NEXN-AS1Q8NBZ9 246 aa7.2□□□□□ -1.26
COL4A3-204ENST00000469504 OR10AG1Q8NH19 301 aa7.2□□□□□ -1.26
COL4A3-204ENST00000469504 SMIM12Q96EX1 92 aa7.2□□□□□ -1.26
COL4A3-204ENST00000469504 AP1S3Q96PC3 154 aa7.2□□□□□ -1.26
COL4A3-204ENST00000469504 MANBALQ9NQG1 85 aa7.2□□□□□ -1.26
COL4A3-204ENST00000469504 VAX2Q9UIW0 290 aa7.2□□□□□ -1.26
COL4A3-204ENST00000469504 TEX46H3BTG2 121 aa7.19□□□□□ -1.26
COL4A3-204ENST00000469504 RAB5CP51148 216 aa7.19□□□□□ -1.26
COL4A3-204ENST00000469504 MIAQ16674 131 aa7.19□□□□□ -1.26
COL4A3-204ENST00000469504 TMUB2Q71RG4 321 aa7.19□□□□□ -1.26
COL4A3-204ENST00000469504 CHAC1Q9BUX1 264 aa7.19□□□□□ -1.26
COL4A3-204ENST00000469504 KRTAP4-8Q9BYQ9 185 aa7.19□□□□□ -1.26
COL4A3-204ENST00000469504 H7C1H1 209 aa7.18□□□□□ -1.26
COL4A3-204ENST00000469504 RPS20P60866 119 aaKnown RBP7.18□□□□□ -1.26
COL4A3-204ENST00000469504 RPL19P84098 196 aaKnown RBP7.18□□□□□ -1.26
COL4A3-204ENST00000469504 EIF5AL1Q6IS14 154 aaKnown RBP7.18□□□□□ -1.26
COL4A3-204ENST00000469504 SCXQ7RTU7 201 aa7.18□□□□□ -1.26
COL4A3-204ENST00000469504 C11orf52Q96A22 123 aa7.18□□□□□ -1.26
COL4A3-204ENST00000469504 DNAJC30Q96LL9 226 aa7.18□□□□□ -1.26
COL4A3-204ENST00000469504 CHCHD5Q9BSY4 110 aa7.18□□□□□ -1.26
COL4A3-204ENST00000469504 TRBV25-1A0A075B6N4 114 aa7.17□□□□□ -1.26
COL4A3-204ENST00000469504 TRAV1-1A0A0B4J248 108 aa7.17□□□□□ -1.26
COL4A3-204ENST00000469504 XKRY2A2RUG3 117 aa7.17□□□□□ -1.26
COL4A3-204ENST00000469504 KRTAP29-1A8MX34 341 aaPredicted RBP7.17□□□□□ -1.26
COL4A3-204ENST00000469504 F5H697 171 aa7.17□□□□□ -1.26
COL4A3-204ENST00000469504 ANGP03950 147 aaKnown RBP7.17□□□□□ -1.26
COL4A3-204ENST00000469504 RPL35P42766 123 aaKnown RBP7.17□□□□□ -1.26
COL4A3-204ENST00000469504 MPV17L2Q567V2 206 aa7.17□□□□□ -1.26
COL4A3-204ENST00000469504 ENHOQ6UWT2 76 aa7.17□□□□□ -1.26
COL4A3-204ENST00000469504 BIN3Q9NQY0 253 aa7.17□□□□□ -1.26
COL4A3-204ENST00000469504 A0A1B0GV50 99 aa7.16□□□□□ -1.26
COL4A3-204ENST00000469504 SMLR1H3BR10 107 aa7.16□□□□□ -1.26
COL4A3-204ENST00000469504 IGLV2-8P01709 118 aa7.16□□□□□ -1.26
COL4A3-204ENST00000469504 CACNG7P62955 275 aa7.16□□□□□ -1.26
COL4A3-204ENST00000469504 DGAT2L7PQ6IED9 249 aa7.16□□□□□ -1.26
COL4A3-204ENST00000469504 C15orf54Q8N8G6 183 aa7.16□□□□□ -1.26
COL4A3-204ENST00000469504 DAZAP1Q96EP5 407 aaKnown RBP7.16□□□□□ -1.26
COL4A3-204ENST00000469504 DERL1Q9BUN8 251 aa7.16□□□□□ -1.26
COL4A3-204ENST00000469504 PRR34Q9NV39 138 aa7.16□□□□□ -1.26
COL4A3-204ENST00000469504 KIF25-AS1Q9Y6Z4 181 aa7.16□□□□□ -1.26
COL4A3-204ENST00000469504 F2Z2F3 143 aa7.15□□□□□ -1.26
COL4A3-204ENST00000469504 PDE6DO43924 150 aa7.15□□□□□ -1.26
COL4A3-204ENST00000469504 IQCJQ1A5X6 159 aa7.15□□□□□ -1.26
COL4A3-204ENST00000469504 FER1L6-AS1Q8NA97 138 aa7.15□□□□□ -1.26
COL4A3-204ENST00000469504 CIRBP-AS1Q8TBR5 109 aa7.15□□□□□ -1.26
COL4A3-204ENST00000469504 IGHV1-24A0A0C4DH33 117 aa7.14□□□□□ -1.27
COL4A3-204ENST00000469504 IFNA1P01562 189 aa7.14□□□□□ -1.27
COL4A3-204ENST00000469504 TRGC1P0CF51 173 aa7.14□□□□□ -1.27
COL4A3-204ENST00000469504 IGLC6P0CF74 106 aa7.14□□□□□ -1.27
COL4A3-204ENST00000469504 TAGLN2P37802 199 aaKnown RBP7.14□□□□□ -1.27
COL4A3-204ENST00000469504 CCL20P78556 96 aa7.14□□□□□ -1.27
COL4A3-204ENST00000469504 CENPWQ5EE01 88 aa7.14□□□□□ -1.27
COL4A3-204ENST00000469504 CLRN3Q8NCR9 226 aa7.14□□□□□ -1.27
COL4A3-204ENST00000469504 GNG13Q9P2W3 67 aa7.14□□□□□ -1.27
COL4A3-204ENST00000469504 TRAV8-4A0A0B4J246 113 aa7.13□□□□□ -1.27
COL4A3-204ENST00000469504 A0A1B0GUV1 79 aa7.13□□□□□ -1.27
COL4A3-204ENST00000469504 C19orf71A6NCJ1 209 aa7.13□□□□□ -1.27
COL4A3-204ENST00000469504 USP17L23D6RBM5 183 aa7.13□□□□□ -1.27
COL4A3-204ENST00000469504 M0QY20 66 aa7.13□□□□□ -1.27
COL4A3-204ENST00000469504 GHRHP01286 108 aa7.13□□□□□ -1.27
COL4A3-204ENST00000469504 P01737 135 aa7.13□□□□□ -1.27
COL4A3-204ENST00000469504 HLA-DQA1P01909 254 aa7.13□□□□□ -1.27
COL4A3-204ENST00000469504 GNG4P50150 75 aa7.13□□□□□ -1.27
COL4A3-204ENST00000469504 RBX1P62877 108 aa7.13□□□□□ -1.27
COL4A3-204ENST00000469504 MEF2BQ02080 365 aaPredicted RBP7.13□□□□□ -1.27
COL4A3-204ENST00000469504 LINC01620Q4KN68 170 aa7.13□□□□□ -1.27
COL4A3-204ENST00000469504 WDR73Q6P4I2 378 aa7.13□□□□□ -1.27
COL4A3-204ENST00000469504 NTM-AS1Q6ZSK4 140 aa7.13□□□□□ -1.27
COL4A3-204ENST00000469504 OR2D3Q8NGH3 330 aa7.13□□□□□ -1.27
COL4A3-204ENST00000469504 PGLYRP4Q96LB8 373 aa7.13□□□□□ -1.27
COL4A3-204ENST00000469504 MUC21A0A0G2JKD1 596 aa7.12□□□□□ -1.27
COL4A3-204ENST00000469504 MUC21A0A140T8X8 626 aa7.12□□□□□ -1.27
COL4A3-204ENST00000469504 OXTP01178 125 aa7.12□□□□□ -1.27
COL4A3-204ENST00000469504 GZMBP10144 247 aa7.12□□□□□ -1.27
COL4A3-204ENST00000469504 C9orf163Q8N9P6 203 aa7.12□□□□□ -1.27
COL4A3-204ENST00000469504 TPPP3Q9BW30 176 aa7.12□□□□□ -1.27
COL4A3-204ENST00000469504 MGPP08493 103 aa7.11□□□□□ -1.27
COL4A3-204ENST00000469504 SULT1A2P50226 295 aa7.11□□□□□ -1.27
COL4A3-204ENST00000469504 GAGE6Q13070 117 aa7.11□□□□□ -1.27
COL4A3-204ENST00000469504 RASL11AQ6T310 242 aa7.11□□□□□ -1.27
COL4A3-204ENST00000469504 LINC00269Q8N2A0 174 aa7.11□□□□□ -1.27
COL4A3-204ENST00000469504 DPH3P1Q9H4G8 78 aa7.11□□□□□ -1.27
COL4A3-204ENST00000469504 NIT2Q9NQR4 276 aa7.11□□□□□ -1.27
COL4A3-204ENST00000469504 PRSS1P07477 247 aa7.1□□□□□ -1.27
COL4A3-204ENST00000469504 KRTAP10-4P60372 401 aaPredicted RBP7.1□□□□□ -1.27
COL4A3-204ENST00000469504 SSTP61278 116 aa7.1□□□□□ -1.27
COL4A3-204ENST00000469504 REG3AQ06141 175 aa7.1□□□□□ -1.27
COL4A3-204ENST00000469504 SERTAD4-AS1Q5TG53 156 aa7.1□□□□□ -1.27
COL4A3-204ENST00000469504 SUMO4Q6EEV6 95 aa7.1□□□□□ -1.27
COL4A3-204ENST00000469504 KRTAP26-1Q6PEX3 210 aa7.1□□□□□ -1.27
COL4A3-204ENST00000469504 C9orf62Q8N4C0 152 aa7.1□□□□□ -1.27
COL4A3-204ENST00000469504 TMEM243Q9BU79 118 aa7.1□□□□□ -1.27
COL4A3-204ENST00000469504 CNFNQ9BYD5 112 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms