RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 PRR20EP86478 221 aa7.62□□□□□ -1.19
NUP50-214ENST00000469163 PRR20CP86479 221 aa7.62□□□□□ -1.19
NUP50-214ENST00000469163 PRR20DP86480 221 aa7.62□□□□□ -1.19
NUP50-214ENST00000469163 PRR20BP86481 221 aa7.62□□□□□ -1.19
NUP50-214ENST00000469163 PRR20AP86496 221 aa7.62□□□□□ -1.19
NUP50-214ENST00000469163 LINC01561Q8N1V8 128 aa7.62□□□□□ -1.19
NUP50-214ENST00000469163 C1orf159Q96HA4 380 aa7.62□□□□□ -1.19
NUP50-214ENST00000469163 IMUPQ9GZP8 106 aa7.62□□□□□ -1.19
NUP50-214ENST00000469163 AGPAT4-IT1Q9H0P7 198 aa7.62□□□□□ -1.19
NUP50-214ENST00000469163 BLCAPP62952 87 aa7.62□□□□□ -1.19
NUP50-214ENST00000469163 EEF1AKMT3Q96AZ1 226 aa7.62□□□□□ -1.19
NUP50-214ENST00000469163 SHANK2-AS3Q9BTD1 123 aa7.62□□□□□ -1.19
NUP50-214ENST00000469163 PRSS22Q9GZN4 317 aa7.62□□□□□ -1.19
NUP50-214ENST00000469163 ZMAT4Q9H898 229 aa7.62□□□□□ -1.19
NUP50-214ENST00000469163 ATP5G1P05496 136 aa7.61□□□□□ -1.19
NUP50-214ENST00000469163 PRNTQ86SH4 94 aa7.61□□□□□ -1.19
NUP50-214ENST00000469163 C20orf173Q96LM9 149 aa7.61□□□□□ -1.19
NUP50-214ENST00000469163 TET2Q6N021 2002 aaPredicted RBP7.61□□□□□ -1.19
NUP50-214ENST00000469163 ATOX1O00244 68 aa7.61□□□□□ -1.19
NUP50-214ENST00000469163 COX7A2P2O60397 106 aa7.61□□□□□ -1.19
NUP50-214ENST00000469163 AVPP01185 164 aa7.61□□□□□ -1.19
NUP50-214ENST00000469163 IGHV4-59P01825 116 aa7.61□□□□□ -1.19
NUP50-214ENST00000469163 HLA-DMBP28068 263 aa7.61□□□□□ -1.19
NUP50-214ENST00000469163 IGFL4Q6B9Z1 124 aa7.61□□□□□ -1.19
NUP50-214ENST00000469163 DPH3P1Q9H4G8 78 aa7.61□□□□□ -1.19
NUP50-214ENST00000469163 NOTCH1P46531 2555 aa7.61□□□□□ -1.19
NUP50-214ENST00000469163 HIVEP1P15822 2718 aa7.6□□□□□ -1.19
NUP50-214ENST00000469163 PLEKHB2Q96CS7 222 aa7.6□□□□□ -1.19
NUP50-214ENST00000469163 B4DSR2 109 aa7.6□□□□□ -1.19
NUP50-214ENST00000469163 CFC1BP0CG36 223 aa7.6□□□□□ -1.19
NUP50-214ENST00000469163 CFC1P0CG37 223 aa7.6□□□□□ -1.19
NUP50-214ENST00000469163 LMO4P61968 165 aa7.6□□□□□ -1.19
NUP50-214ENST00000469163 LINC00482Q8N8I6 264 aa7.6□□□□□ -1.19
NUP50-214ENST00000469163 TRBV10-2A0A0K0K1G8 114 aa7.59□□□□□ -1.19
NUP50-214ENST00000469163 MRPL51Q4U2R6 128 aaKnown RBP7.59□□□□□ -1.19
NUP50-214ENST00000469163 C11orf71Q6IPW1 123 aa7.59□□□□□ -1.19
NUP50-214ENST00000469163 P0C879 139 aa7.59□□□□□ -1.19
NUP50-214ENST00000469163 SUB1P53999 127 aaKnown RBP eCLIP7.59□□□□□ -1.19
NUP50-214ENST00000469163 NPC2P61916 151 aa7.59□□□□□ -1.19
NUP50-214ENST00000469163 CLEC19AQ6UXS0 136 aa7.59□□□□□ -1.19
NUP50-214ENST00000469163 C17orf77Q96MU5 243 aa7.59□□□□□ -1.19
NUP50-214ENST00000469163 HTN1P15515 57 aa7.58□□□□□ -1.2
NUP50-214ENST00000469163 WT1-ASQ06250 92 aa7.58□□□□□ -1.2
NUP50-214ENST00000469163 FAM104BQ5XKR9 115 aa7.58□□□□□ -1.2
NUP50-214ENST00000469163 SPANXDQ9BXN6 97 aa7.58□□□□□ -1.2
NUP50-214ENST00000469163 TRBV6-6A0A0A6YYG2 114 aa7.58□□□□□ -1.2
NUP50-214ENST00000469163 UPK2O00526 184 aa7.58□□□□□ -1.2
NUP50-214ENST00000469163 DEFB113Q30KQ7 82 aa7.58□□□□□ -1.2
NUP50-214ENST00000469163 KLHL30-AS1Q8NEE0 82 aa7.58□□□□□ -1.2
NUP50-214ENST00000469163 METTL26Q96S19 204 aa7.58□□□□□ -1.2
NUP50-214ENST00000469163 C15orf61A6NNL5 157 aa7.58□□□□□ -1.2
NUP50-214ENST00000469163 IGKV3-20P01619 116 aa7.58□□□□□ -1.2
NUP50-214ENST00000469163 NDPQ00604 133 aa7.58□□□□□ -1.2
NUP50-214ENST00000469163 DEFB112Q30KQ8 113 aa7.58□□□□□ -1.2
NUP50-214ENST00000469163 NBEAL2Q6ZNJ1 2754 aa7.58□□□□□ -1.2
NUP50-214ENST00000469163 PRSS46E5RG02 174 aa7.57□□□□□ -1.2
NUP50-214ENST00000469163 ZNF561-AS1K7EIQ3 104 aa7.57□□□□□ -1.2
NUP50-214ENST00000469163 HOXB4P17483 251 aaPredicted RBP7.57□□□□□ -1.2
NUP50-214ENST00000469163 SYNJ2BPP57105 145 aa7.57□□□□□ -1.2
NUP50-214ENST00000469163 KLK15Q9H2R5 256 aa7.57□□□□□ -1.2
NUP50-214ENST00000469163 PLNP26678 52 aa7.57□□□□□ -1.2
NUP50-214ENST00000469163 C10orf99Q6UWK7 81 aa7.57□□□□□ -1.2
NUP50-214ENST00000469163 PEMTQ9UBM1 199 aa7.57□□□□□ -1.2
NUP50-214ENST00000469163 FAM240AA0A1B0GVK7 77 aa7.57□□□□□ -1.2
NUP50-214ENST00000469163 SPRY2O43597 315 aa7.57□□□□□ -1.2
NUP50-214ENST00000469163 Q6ZS46 218 aa7.57□□□□□ -1.2
NUP50-214ENST00000469163 MLST8Q9BVC4 326 aa7.57□□□□□ -1.2
NUP50-214ENST00000469163 TRGV3P03979 118 aa7.56□□□□□ -1.2
NUP50-214ENST00000469163 ELANEP08246 267 aa7.56□□□□□ -1.2
NUP50-214ENST00000469163 C10orf113Q5VZT2 155 aa7.56□□□□□ -1.2
NUP50-214ENST00000469163 OTOGQ6ZRI0 2925 aa7.56□□□□□ -1.2
NUP50-214ENST00000469163 LINC00643Q86TS7 51 aa7.56□□□□□ -1.2
NUP50-214ENST00000469163 IGKV1OR2-108A0A075B7D4 117 aa7.56□□□□□ -1.2
NUP50-214ENST00000469163 ATP6V0E1O15342 81 aa7.56□□□□□ -1.2
NUP50-214ENST00000469163 RHOHQ15669 191 aa7.56□□□□□ -1.2
NUP50-214ENST00000469163 FMC1Q96HJ9 113 aa7.56□□□□□ -1.2
NUP50-214ENST00000469163 FAM167A-AS1Q96KT0 104 aa7.56□□□□□ -1.2
NUP50-214ENST00000469163 LINC01619G3V211 115 aa7.56□□□□□ -1.2
NUP50-214ENST00000469163 DEFB136Q30KP8 78 aa7.56□□□□□ -1.2
NUP50-214ENST00000469163 LYZL1Q6UWQ5 148 aa7.56□□□□□ -1.2
NUP50-214ENST00000469163 KAAG1Q9UBP8 84 aa7.55□□□□□ -1.2
NUP50-214ENST00000469163 NDUFC2O95298 119 aa7.55□□□□□ -1.2
NUP50-214ENST00000469163 TCRAP04437 139 aa7.55□□□□□ -1.2
NUP50-214ENST00000469163 Q8N8P6 123 aa7.55□□□□□ -1.2
NUP50-214ENST00000469163 NEXN-AS1Q8NBZ9 246 aa7.55□□□□□ -1.2
NUP50-214ENST00000469163 MRPL36Q9P0J6 103 aaKnown RBP7.55□□□□□ -1.2
NUP50-214ENST00000469163 CGB3P0DN86 165 aa7.55□□□□□ -1.2
NUP50-214ENST00000469163 CGB7P0DN87 165 aa7.55□□□□□ -1.2
NUP50-214ENST00000469163 C4orf48Q5BLP8 95 aa7.55□□□□□ -1.2
NUP50-214ENST00000469163 FAM110DQ8TAY7 271 aaPredicted RBP7.55□□□□□ -1.2
NUP50-214ENST00000469163 TP53TG1Q9Y2A0 90 aa7.55□□□□□ -1.2
NUP50-214ENST00000469163 IGHV1-69DA0A0B4J2H0 117 aa7.54□□□□□ -1.2
NUP50-214ENST00000469163 LY6LH3BQJ8 138 aa7.54□□□□□ -1.2
NUP50-214ENST00000469163 IGHV1-69P01742 117 aa7.54□□□□□ -1.2
NUP50-214ENST00000469163 PAX8Q06710 450 aa7.54□□□□□ -1.2
NUP50-214ENST00000469163 C15orf32Q32M92 178 aa7.54□□□□□ -1.2
NUP50-214ENST00000469163 PRIMA1Q86XR5 153 aa7.54□□□□□ -1.2
NUP50-214ENST00000469163 LINC01356Q8N9X3 169 aa7.54□□□□□ -1.2
NUP50-214ENST00000469163 TMEM243Q9BU79 118 aa7.54□□□□□ -1.2
NUP50-214ENST00000469163 OTORQ9NRC9 128 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms