RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 A0A087WWL8 130 aa10.57□□□□□ -0.72
SMARCD3-205ENST00000469154 KRTAP1-1Q07627 177 aa10.57□□□□□ -0.72
SMARCD3-205ENST00000469154 SYT8Q8NBV8 401 aa10.57□□□□□ -0.72
SMARCD3-205ENST00000469154 MXRA5Q9NR99 2828 aa10.57□□□□□ -0.72
SMARCD3-205ENST00000469154 TRBV27A0A0K0K1C4 114 aa10.56□□□□□ -0.72
SMARCD3-205ENST00000469154 SDHAF1A6NFY7 115 aa10.56□□□□□ -0.72
SMARCD3-205ENST00000469154 SRSF9Q13242 221 aaKnown RBP eCLIP10.56□□□□□ -0.72
SMARCD3-205ENST00000469154 PGPEP1Q9NXJ5 209 aa10.56□□□□□ -0.72
SMARCD3-205ENST00000469154 IGHV3-16A0A0C4DH30 117 aa10.56□□□□□ -0.72
SMARCD3-205ENST00000469154 UBE2D1P51668 147 aa10.56□□□□□ -0.72
SMARCD3-205ENST00000469154 AMTNQ6UX39 209 aa10.56□□□□□ -0.72
SMARCD3-205ENST00000469154 PRO0461Q9UI25 63 aa10.56□□□□□ -0.72
SMARCD3-205ENST00000469154 PSMB8P28062 276 aa10.55□□□□□ -0.72
SMARCD3-205ENST00000469154 MRPL16Q9NX20 251 aaKnown RBP10.55□□□□□ -0.72
SMARCD3-205ENST00000469154 A0A0J9YX75 114 aa10.55□□□□□ -0.72
SMARCD3-205ENST00000469154 TMEM89A2RUT3 159 aa10.55□□□□□ -0.72
SMARCD3-205ENST00000469154 FSHBP01225 129 aa10.55□□□□□ -0.72
SMARCD3-205ENST00000469154 RPL39P62891 51 aaKnown RBP10.55□□□□□ -0.72
SMARCD3-205ENST00000469154 SMR3AQ99954 134 aa10.55□□□□□ -0.72
SMARCD3-205ENST00000469154 ZNF688P0C7X2 276 aa10.54□□□□□ -0.72
SMARCD3-205ENST00000469154 SNRPD3P62318 126 aaKnown RBP10.54□□□□□ -0.72
SMARCD3-205ENST00000469154 RHOHQ15669 191 aa10.54□□□□□ -0.72
SMARCD3-205ENST00000469154 WFDC12Q8WWY7 111 aa10.54□□□□□ -0.72
SMARCD3-205ENST00000469154 YAE1D1Q9NRH1 226 aa10.54□□□□□ -0.72
SMARCD3-205ENST00000469154 A0A0J9YY99 117 aa10.54□□□□□ -0.72
SMARCD3-205ENST00000469154 TMEM238C9JI98 176 aa10.54□□□□□ -0.72
SMARCD3-205ENST00000469154 DEFB112Q30KQ8 113 aa10.54□□□□□ -0.72
SMARCD3-205ENST00000469154 ZNF876PQ49A33 203 aa10.54□□□□□ -0.72
SMARCD3-205ENST00000469154 KLHL30-AS1Q8NEE0 82 aa10.54□□□□□ -0.72
SMARCD3-205ENST00000469154 ZNF56Q15929 161 aa10.53□□□□□ -0.72
SMARCD3-205ENST00000469154 NSUN5P1Q3KNT7 163 aa10.53□□□□□ -0.72
SMARCD3-205ENST00000469154 ETDBQ3ZM63 59 aa10.53□□□□□ -0.72
SMARCD3-205ENST00000469154 FAM74A4Q5TZK3 123 aa10.53□□□□□ -0.72
SMARCD3-205ENST00000469154 LYRM7Q5U5X0 104 aa10.53□□□□□ -0.72
SMARCD3-205ENST00000469154 DLX4Q92988 240 aaPredicted RBP10.53□□□□□ -0.72
SMARCD3-205ENST00000469154 K7EQG2 157 aa10.53□□□□□ -0.72
SMARCD3-205ENST00000469154 EMP1P54849 157 aa10.53□□□□□ -0.72
SMARCD3-205ENST00000469154 TRPT1Q86TN4 253 aaKnown RBP10.53□□□□□ -0.72
SMARCD3-205ENST00000469154 MTORP42345 2549 aa10.52□□□□□ -0.72
SMARCD3-205ENST00000469154 IGHV1OR15-1A0A075B7D0 117 aa10.52□□□□□ -0.73
SMARCD3-205ENST00000469154 TMEM170BQ5T4T1 132 aa10.52□□□□□ -0.73
SMARCD3-205ENST00000469154 SH2D6Q7Z4S9 175 aa10.52□□□□□ -0.73
SMARCD3-205ENST00000469154 M0QY20 66 aa10.52□□□□□ -0.73
SMARCD3-205ENST00000469154 TSPAN13O95857 204 aa10.52□□□□□ -0.73
SMARCD3-205ENST00000469154 TSSC4Q9Y5U2 329 aaPredicted RBP10.52□□□□□ -0.73
SMARCD3-205ENST00000469154 SCGB1A1P11684 91 aa10.51□□□□□ -0.73
SMARCD3-205ENST00000469154 NFE4Q86UQ8 179 aa10.51□□□□□ -0.73
SMARCD3-205ENST00000469154 MDFICQ9P1T7 246 aa10.51□□□□□ -0.73
SMARCD3-205ENST00000469154 ZNF256Q9Y2P7 627 aaPredicted RBP10.51□□□□□ -0.73
SMARCD3-205ENST00000469154 HIVEP2P31629 2446 aa10.51□□□□□ -0.73
SMARCD3-205ENST00000469154 HIVEP1P15822 2718 aa10.51□□□□□ -0.73
SMARCD3-205ENST00000469154 Q8N1Y9 231 aa10.5□□□□□ -0.73
SMARCD3-205ENST00000469154 ZNRF2Q8NHG8 242 aa10.5□□□□□ -0.73
SMARCD3-205ENST00000469154 SIGMAR1Q99720 223 aa10.5□□□□□ -0.73
SMARCD3-205ENST00000469154 SPAG8Q99932 426 aaPredicted RBP10.5□□□□□ -0.73
SMARCD3-205ENST00000469154 TRAV12-2A0A075B6T6 113 aa10.5□□□□□ -0.73
SMARCD3-205ENST00000469154 GAGE12HA6NDE8 117 aa10.5□□□□□ -0.73
SMARCD3-205ENST00000469154 TSPEAR-AS2P59090 65 aa10.5□□□□□ -0.73
SMARCD3-205ENST00000469154 SLC25A29Q8N8R3 303 aa10.5□□□□□ -0.73
SMARCD3-205ENST00000469154 ATP6V0E2Q8NHE4 81 aa10.5□□□□□ -0.73
SMARCD3-205ENST00000469154 DEFB104AQ8WTQ1 72 aa10.5□□□□□ -0.73
SMARCD3-205ENST00000469154 SPATA25Q9BR10 227 aa10.5□□□□□ -0.73
SMARCD3-205ENST00000469154 IGKV3-20P01619 116 aa10.49□□□□□ -0.73
SMARCD3-205ENST00000469154 IGHV4-59P01825 116 aa10.49□□□□□ -0.73
SMARCD3-205ENST00000469154 LGALS3P17931 250 aaKnown RBP10.49□□□□□ -0.73
SMARCD3-205ENST00000469154 UBE2D3P61077 147 aa10.49□□□□□ -0.73
SMARCD3-205ENST00000469154 UBE2D2P62837 147 aa10.49□□□□□ -0.73
SMARCD3-205ENST00000469154 NDUFA11Q86Y39 141 aa10.49□□□□□ -0.73
SMARCD3-205ENST00000469154 MTURNQ8N3F0 131 aa10.49□□□□□ -0.73
SMARCD3-205ENST00000469154 TRGV11A0A075B6L2 103 aa10.49□□□□□ -0.73
SMARCD3-205ENST00000469154 J3QQQ9 107 aa10.49□□□□□ -0.73
SMARCD3-205ENST00000469154 APOMO95445 188 aa10.49□□□□□ -0.73
SMARCD3-205ENST00000469154 LY6G6DO95868 133 aa10.49□□□□□ -0.73
SMARCD3-205ENST00000469154 IGHV3-30P01768 117 aa10.49□□□□□ -0.73
SMARCD3-205ENST00000469154 IGHV3-30-5P0DP03 117 aa10.49□□□□□ -0.73
SMARCD3-205ENST00000469154 CFAP126Q5VTH2 177 aa10.49□□□□□ -0.73
SMARCD3-205ENST00000469154 SPINK13Q1W4C9 94 aa10.48□□□□□ -0.73
SMARCD3-205ENST00000469154 TEX29Q8N6K0 151 aa10.48□□□□□ -0.73
SMARCD3-205ENST00000469154 RNF152Q8N8N0 203 aa10.48□□□□□ -0.73
SMARCD3-205ENST00000469154 LOC107984156A0A0G2JMH3 177 aa10.48□□□□□ -0.73
SMARCD3-205ENST00000469154 LEPROTO15243 131 aa10.48□□□□□ -0.73
SMARCD3-205ENST00000469154 AZU1P20160 251 aa10.48□□□□□ -0.73
SMARCD3-205ENST00000469154 ARL17AQ8IVW1 177 aa10.48□□□□□ -0.73
SMARCD3-205ENST00000469154 AMELXQ99217 191 aa10.48□□□□□ -0.73
SMARCD3-205ENST00000469154 CYSRT1A8MQ03 144 aa10.47□□□□□ -0.73
SMARCD3-205ENST00000469154 I3L3M4 83 aa10.47□□□□□ -0.73
SMARCD3-205ENST00000469154 PSMB2P49721 201 aa10.47□□□□□ -0.73
SMARCD3-205ENST00000469154 C10orf99Q6UWK7 81 aa10.47□□□□□ -0.73
SMARCD3-205ENST00000469154 C20orf203Q8NBC4 194 aa10.47□□□□□ -0.73
SMARCD3-205ENST00000469154 C1QTNF4Q9BXJ3 329 aa10.47□□□□□ -0.73
SMARCD3-205ENST00000469154 TMEM223A0PJW6 202 aa10.47□□□□□ -0.73
SMARCD3-205ENST00000469154 GTSF1LQ9H1H1 148 aa10.47□□□□□ -0.73
SMARCD3-205ENST00000469154 Q6YL49 198 aa10.46□□□□□ -0.73
SMARCD3-205ENST00000469154 SYNJ2BPP57105 145 aa10.46□□□□□ -0.74
SMARCD3-205ENST00000469154 CFC1BP0CG36 223 aa10.45□□□□□ -0.74
SMARCD3-205ENST00000469154 CFC1P0CG37 223 aa10.45□□□□□ -0.74
SMARCD3-205ENST00000469154 P0DMU3 169 aa10.45□□□□□ -0.74
SMARCD3-205ENST00000469154 FAM231AP0DMU4 169 aa10.45□□□□□ -0.74
SMARCD3-205ENST00000469154 FAM231CP0DMU5 169 aa10.45□□□□□ -0.74
SMARCD3-205ENST00000469154 DUX5Q96PT3 197 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms