RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 ANKRD39Q53RE8 183 aa5.73□□□□□ -1.49
HDAC6-216ENST00000468949 OR10J3Q5JRS4 329 aa5.73□□□□□ -1.49
HDAC6-216ENST00000468949 CASC10Q5T4H9 136 aa5.73□□□□□ -1.49
HDAC6-216ENST00000468949 FAM104BQ5XKR9 115 aa5.73□□□□□ -1.49
HDAC6-216ENST00000468949 SUMO4Q6EEV6 95 aa5.73□□□□□ -1.49
HDAC6-216ENST00000468949 POM121L12Q8N7R1 296 aa5.73□□□□□ -1.49
HDAC6-216ENST00000468949 RPL36ALQ969Q0 106 aaKnown RBP5.73□□□□□ -1.49
HDAC6-216ENST00000468949 TRAPPC1Q9Y5R8 145 aa5.73□□□□□ -1.49
HDAC6-216ENST00000468949 TNFRSF18Q9Y5U5 241 aa5.73□□□□□ -1.49
HDAC6-216ENST00000468949 ICOSQ9Y6W8 199 aa5.73□□□□□ -1.49
HDAC6-216ENST00000468949 TRAV26-2A0A0B4J265 109 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 TRBV10-1A0A0K0K1A3 114 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 GAGE12JA6NER3 117 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 NCR2O95944 276 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 NUDT3O95989 172 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 RAB4AP20338 218 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 HOXA5P20719 270 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 SRIP30626 198 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 CRYBA4P53673 196 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 GAGE1Q13065 139 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 GAGE4Q13068 117 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 GAGE5Q13069 117 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 GAGE13Q4V321 117 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 UFSP1Q6NVU6 142 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 TMEM136Q6ZRR5 245 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 SH2D6Q7Z4S9 175 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 ORMDL3Q8N138 153 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 SLC25A29Q8N8R3 303 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 C15orf53Q8NAA6 179 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 GATD1Q8NB37 220 aa5.72□□□□□ -1.49
HDAC6-216ENST00000468949 TMA7Q9Y2S6 64 aaKnown RBP5.72□□□□□ -1.49
HDAC6-216ENST00000468949 DNAH7Q8WXX0 4024 aa5.71□□□□□ -1.49
HDAC6-216ENST00000468949 RYR3Q15413 4870 aa5.71□□□□□ -1.5
HDAC6-216ENST00000468949 DYNC2H1Q8NCM8 4307 aaKnown RBP5.71□□□□□ -1.5
HDAC6-216ENST00000468949 D6R8Y8 96 aa5.71□□□□□ -1.5
HDAC6-216ENST00000468949 RAB5AP20339 215 aa5.71□□□□□ -1.5
HDAC6-216ENST00000468949 MRPL23Q16540 153 aaKnown RBP5.71□□□□□ -1.5
HDAC6-216ENST00000468949 MRPL51Q4U2R6 128 aaKnown RBP5.71□□□□□ -1.5
HDAC6-216ENST00000468949 ZFAND6Q6FIF0 208 aa5.71□□□□□ -1.5
HDAC6-216ENST00000468949 CEMP1Q6PRD7 247 aaPredicted RBP5.71□□□□□ -1.5
HDAC6-216ENST00000468949 DNAJC30Q96LL9 226 aa5.71□□□□□ -1.5
HDAC6-216ENST00000468949 PRELID3AQ96N28 172 aa5.71□□□□□ -1.5
HDAC6-216ENST00000468949 KIF25-AS1Q9Y6Z4 181 aa5.71□□□□□ -1.5
HDAC6-216ENST00000468949 MUC4Q99102 2169 aa5.7□□□□□ -1.5
HDAC6-216ENST00000468949 SACSQ9NZJ4 4579 aa5.7□□□□□ -1.5
HDAC6-216ENST00000468949 TRBV7-3A0A075B6L6 115 aa5.7□□□□□ -1.5
HDAC6-216ENST00000468949 SMKR1H3BMG3 65 aa5.7□□□□□ -1.5
HDAC6-216ENST00000468949 H3BNG1 76 aa5.7□□□□□ -1.5
HDAC6-216ENST00000468949 M0QY20 66 aa5.7□□□□□ -1.5
HDAC6-216ENST00000468949 P0DMU3 169 aa5.7□□□□□ -1.5
HDAC6-216ENST00000468949 FAM231AP0DMU4 169 aa5.7□□□□□ -1.5
HDAC6-216ENST00000468949 FAM231CP0DMU5 169 aa5.7□□□□□ -1.5
HDAC6-216ENST00000468949 NEXN-AS1Q8NBZ9 246 aa5.7□□□□□ -1.5
HDAC6-216ENST00000468949 ZNRF2Q8NHG8 242 aa5.7□□□□□ -1.5
HDAC6-216ENST00000468949 RNF185Q96GF1 192 aa5.7□□□□□ -1.5
HDAC6-216ENST00000468949 YPEL4Q96NS1 127 aa5.7□□□□□ -1.5
HDAC6-216ENST00000468949 MAP1LC3AQ9H492 121 aa5.7□□□□□ -1.5
HDAC6-216ENST00000468949 ST20Q9HBF5 79 aa5.7□□□□□ -1.5
HDAC6-216ENST00000468949 NIT2Q9NQR4 276 aa5.7□□□□□ -1.5
HDAC6-216ENST00000468949 LAMTOR2Q9Y2Q5 125 aa5.7□□□□□ -1.5
HDAC6-216ENST00000468949 A0A096LPF7 62 aa5.69□□□□□ -1.5
HDAC6-216ENST00000468949 LOC100131303A0A0U1RQF7 123 aa5.69□□□□□ -1.5
HDAC6-216ENST00000468949 PHOX2AO14813 284 aa5.69□□□□□ -1.5
HDAC6-216ENST00000468949 TCTAP57738 103 aa5.69□□□□□ -1.5
HDAC6-216ENST00000468949 LINC00315P59091 139 aa5.69□□□□□ -1.5
HDAC6-216ENST00000468949 KIAA1644Q3SXP7 199 aa5.69□□□□□ -1.5
HDAC6-216ENST00000468949 Q6ZSN1 163 aa5.69□□□□□ -1.5
HDAC6-216ENST00000468949 NEGR1Q7Z3B1 354 aa5.69□□□□□ -1.5
HDAC6-216ENST00000468949 RPL39LQ96EH5 51 aaKnown RBP5.69□□□□□ -1.5
HDAC6-216ENST00000468949 SDHAF1A6NFY7 115 aa5.68□□□□□ -1.5
HDAC6-216ENST00000468949 COLCA2A8K830 154 aa5.68□□□□□ -1.5
HDAC6-216ENST00000468949 TNFRSF6BO95407 300 aa5.68□□□□□ -1.5
HDAC6-216ENST00000468949 PMCHP20382 165 aa5.68□□□□□ -1.5
HDAC6-216ENST00000468949 FCER1GP30273 86 aa5.68□□□□□ -1.5
HDAC6-216ENST00000468949 SUMO2P61956 95 aaKnown RBP5.68□□□□□ -1.5
HDAC6-216ENST00000468949 COTL1Q14019 142 aa5.68□□□□□ -1.5
HDAC6-216ENST00000468949 TMEM97Q5BJF2 176 aa5.68□□□□□ -1.5
HDAC6-216ENST00000468949 DAZ4Q86SG3 579 aaKnown RBP5.68□□□□□ -1.5
HDAC6-216ENST00000468949 UBE2DNLQ8IWF7 75 aa5.68□□□□□ -1.5
HDAC6-216ENST00000468949 ATP6V0E2Q8NHE4 81 aa5.68□□□□□ -1.5
HDAC6-216ENST00000468949 VSIG2Q96IQ7 327 aa5.68□□□□□ -1.5
HDAC6-216ENST00000468949 KIR2DL4Q99706 377 aa5.68□□□□□ -1.5
HDAC6-216ENST00000468949 DAZ3Q9NR90 486 aaKnown RBP5.68□□□□□ -1.5
HDAC6-216ENST00000468949 LCE6AA0A183 80 aa5.67□□□□□ -1.5
HDAC6-216ENST00000468949 TCAPO15273 167 aa5.67□□□□□ -1.5
HDAC6-216ENST00000468949 NPYP01303 97 aa5.67□□□□□ -1.5
HDAC6-216ENST00000468949 TRGC2P03986 189 aa5.67□□□□□ -1.5
HDAC6-216ENST00000468949 CCL18P55774 89 aa5.67□□□□□ -1.5
HDAC6-216ENST00000468949 C20orf78Q9BR46 151 aa5.67□□□□□ -1.5
HDAC6-216ENST00000468949 RYR2Q92736 4967 aa5.67□□□□□ -1.5
HDAC6-216ENST00000468949 STARD9Q9P2P6 4700 aa5.66□□□□□ -1.5
HDAC6-216ENST00000468949 IGHV3-38A0A0C4DH36 116 aa5.66□□□□□ -1.5
HDAC6-216ENST00000468949 TRBV6-5A0A0K0K1A5 114 aa5.66□□□□□ -1.5
HDAC6-216ENST00000468949 LOC389332A0A1B0GUA5 103 aa5.66□□□□□ -1.5
HDAC6-216ENST00000468949 PRSS47A8MTI9 375 aa5.66□□□□□ -1.5
HDAC6-216ENST00000468949 C1orf196B1AJZ1 125 aa5.66□□□□□ -1.5
HDAC6-216ENST00000468949 I3L3M4 83 aa5.66□□□□□ -1.5
HDAC6-216ENST00000468949 VCYO14598 125 aa5.66□□□□□ -1.5
HDAC6-216ENST00000468949 UBE2L6O14933 153 aa5.66□□□□□ -1.5
HDAC6-216ENST00000468949 UBE2D3P61077 147 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms