RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 PTPRZ1P23471 2315 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-207ENST00000468925 TRAV26-2A0A0B4J265 109 aa3.63□□□□□ -1.83
SF3B1-207ENST00000468925 IGHV1-18A0A0C4DH31 117 aa3.63□□□□□ -1.83
SF3B1-207ENST00000468925 H0YGX0 51 aa3.63□□□□□ -1.83
SF3B1-207ENST00000468925 I3L3M4 83 aa3.63□□□□□ -1.83
SF3B1-207ENST00000468925 LYZL6O75951 148 aa3.63□□□□□ -1.83
SF3B1-207ENST00000468925 IGKV1-17P01599 117 aa3.63□□□□□ -1.83
SF3B1-207ENST00000468925 IGHV3-9P01782 118 aa3.63□□□□□ -1.83
SF3B1-207ENST00000468925 RPL35AP18077 110 aaKnown RBP3.63□□□□□ -1.83
SF3B1-207ENST00000468925 FOLR3P41439 243 aa3.63□□□□□ -1.83
SF3B1-207ENST00000468925 UBE2E1P51965 193 aa3.63□□□□□ -1.83
SF3B1-207ENST00000468925 NSUN5P1Q3KNT7 163 aa3.63□□□□□ -1.83
SF3B1-207ENST00000468925 LINC00336Q6ZUF6 198 aa3.63□□□□□ -1.83
SF3B1-207ENST00000468925 C3orf56Q8N813 242 aa3.63□□□□□ -1.83
SF3B1-207ENST00000468925 NUP37Q8NFH4 326 aa3.63□□□□□ -1.83
SF3B1-207ENST00000468925 LINC00477Q96M19 166 aa3.63□□□□□ -1.83
SF3B1-207ENST00000468925 CCL13Q99616 98 aa3.63□□□□□ -1.83
SF3B1-207ENST00000468925 KLK5Q9Y337 293 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-207ENST00000468925 MYO15AQ9UKN7 3530 aa3.63□□□□□ -1.83
SF3B1-207ENST00000468925 FAM208BQ5VWN6 2430 aa3.63□□□□□ -1.83
SF3B1-207ENST00000468925 NAV2Q8IVL1 2488 aa3.63□□□□□ -1.83
SF3B1-207ENST00000468925 ZNF318Q5VUA4 2279 aa3.63□□□□□ -1.83
SF3B1-207ENST00000468925 GVINP1Q7Z2Y8 2422 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 CABIN1Q9Y6J0 2220 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 RIF1Q5UIP0 2472 aaKnown RBP3.62□□□□□ -1.83
SF3B1-207ENST00000468925 TRAV7A0A075B6U4 112 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 TRAV8-3A0A0A6YYJ7 113 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 TRAV41A0A0B4J266 112 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 TRAV21A0A0B4J279 112 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 IGHV7-4-1A0A0J9YVY3 117 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 TRBV27A0A0K0K1C4 114 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 H3BQ85 93 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 H7C2G1 150 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 BAALC-AS2P0C853 105 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 ZNF883P0CG24 379 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 FAM27E3Q08E93 113 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 KLKP1Q107X0 134 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 DEFB133Q30KQ1 61 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 C9orf47Q6ZRZ4 202 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 Q6ZT83 130 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 DAZ4Q86SG3 579 aaKnown RBP3.62□□□□□ -1.83
SF3B1-207ENST00000468925 DYNAPQ8N1N2 210 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 DSCR8Q96T75 97 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 DAZ1Q9NQZ3 744 aaKnown RBP3.62□□□□□ -1.83
SF3B1-207ENST00000468925 DAZ3Q9NR90 486 aaKnown RBP3.62□□□□□ -1.83
SF3B1-207ENST00000468925 MSRB1Q9NZV6 116 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 MRPL36Q9P0J6 103 aaKnown RBP3.62□□□□□ -1.83
SF3B1-207ENST00000468925 FER1L5A0AVI2 2057 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 CACNA1HO95180 2353 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 TNCP24821 2201 aa3.62□□□□□ -1.83
SF3B1-207ENST00000468925 KNTC1P50748 2209 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 TRAV13-2A0A0B4J235 113 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 IGKV3D-20A0A0C4DH25 116 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 IGHV1-58A0A0C4DH39 117 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 TRBV7-6A0A0J9YX20 115 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 JMJD7-PLA2G4BH0Y9G9 81 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 H3BTX0 84 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 SOCS3O14543 225 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 ENSAO43768 121 aaKnown RBP3.61□□□□□ -1.83
SF3B1-207ENST00000468925 NXPH4O95158 308 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 IGLV1-44P01699 117 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 PRSS2P07478 247 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 S100A4P26447 101 aaKnown RBP3.61□□□□□ -1.83
SF3B1-207ENST00000468925 POLR2KP53803 58 aaKnown RBP3.61□□□□□ -1.83
SF3B1-207ENST00000468925 CD164Q04900 197 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 Q6YL49 198 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 ZNRF1Q8ND25 227 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 LY6G5BQ8NDX9 201 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 OBSCN-AS1Q96MR7 158 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 DEFB118Q96PH6 123 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 UBE2D4Q9Y2X8 147 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 PHLDA3Q9Y5J5 127 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 DNAH14Q0VDD8 3507 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 FRYLO94915 3013 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 DOCK7Q96N67 2140 aa3.61□□□□□ -1.83
SF3B1-207ENST00000468925 IGKV2-40A0A087WW87 121 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-207ENST00000468925 LYRM9A8MSI8 78 aa3.6□□□□□ -1.83
SF3B1-207ENST00000468925 E7EUB6 86 aa3.6□□□□□ -1.83
SF3B1-207ENST00000468925 TMEM178BH3BS89 294 aa3.6□□□□□ -1.83
SF3B1-207ENST00000468925 K7EIM0 57 aa3.6□□□□□ -1.83
SF3B1-207ENST00000468925 ERC2-IT1O76042 136 aa3.6□□□□□ -1.83
SF3B1-207ENST00000468925 IGKV2D-40P01614 121 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-207ENST00000468925 GATA1P15976 413 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-207ENST00000468925 LOXP28300 417 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-207ENST00000468925 XCL1P47992 114 aa3.6□□□□□ -1.83
SF3B1-207ENST00000468925 KRTAP10-7P60409 375 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-207ENST00000468925 TFF2Q03403 129 aa3.6□□□□□ -1.83
SF3B1-207ENST00000468925 PMAIP1Q13794 54 aa3.6□□□□□ -1.83
SF3B1-207ENST00000468925 HCP5Q6MZN7 132 aa3.6□□□□□ -1.83
SF3B1-207ENST00000468925 LYPD5Q6UWN5 251 aa3.6□□□□□ -1.83
SF3B1-207ENST00000468925 PRR15Q8IV56 129 aa3.6□□□□□ -1.83
SF3B1-207ENST00000468925 C10orf105Q8TEF2 133 aa3.6□□□□□ -1.83
SF3B1-207ENST00000468925 SMCR5Q8TEV8 140 aa3.6□□□□□ -1.83
SF3B1-207ENST00000468925 DYNLRB2Q8TF09 96 aa3.6□□□□□ -1.83
SF3B1-207ENST00000468925 GAFA1Q96PS6 74 aa3.6□□□□□ -1.83
SF3B1-207ENST00000468925 KLK15Q9H2R5 256 aa3.6□□□□□ -1.83
SF3B1-207ENST00000468925 XCL2Q9UBD3 114 aa3.6□□□□□ -1.83
SF3B1-207ENST00000468925 FAM186AA6NE01 2351 aa3.6□□□□□ -1.83
SF3B1-207ENST00000468925 DSCAML1Q8TD84 2053 aa3.59□□□□□ -1.83
SF3B1-207ENST00000468925 INTS1Q8N201 2190 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms