RNA–Protein interactions for RNA: ENST00000468570.1

SGIP1-208, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 324 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-208ENST00000468570 TMEM131LA2VDJ0 1609 aa0.55□□□□□ -2.32
SGIP1-208ENST00000468570 KDM6BO15054 1643 aa0.55□□□□□ -2.32
SGIP1-208ENST00000468570 RREB1Q92766 1687 aa0.55□□□□□ -2.32
SGIP1-208ENST00000468570 CPSF1Q10570 1443 aaKnown RBP0.55□□□□□ -2.32
SGIP1-208ENST00000468570 CEP162Q5TB80 1403 aa0.55□□□□□ -2.32
SGIP1-208ENST00000468570 CCDC88BA6NC98 1476 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 HELZ2Q9BYK8 2649 aaKnown RBP0.54□□□□□ -2.32
SGIP1-208ENST00000468570 ARHGEF12Q9NZN5 1544 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 BAZ1AQ9NRL2 1556 aaPredicted RBP0.54□□□□□ -2.32
SGIP1-208ENST00000468570 TOP2BQ02880 1626 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 MAP3K4Q9Y6R4 1608 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 CLTCQ00610 1675 aaKnown RBP0.54□□□□□ -2.32
SGIP1-208ENST00000468570 TRAV2A0A0B4J234 112 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 IGHV1-24A0A0C4DH33 117 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 A0A0J9YY99 117 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 TMEM262E9PQX1 116 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 J3QLW9 94 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 EDF1O60869 148 aaKnown RBP0.54□□□□□ -2.32
SGIP1-208ENST00000468570 SPINK8P0C7L1 97 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 CKS2P33552 79 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 Q0VG73 95 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 INSL4Q14641 139 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 PYY3Q5JQD4 70 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 C9orf153Q5TBE3 101 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 MRPL54Q6P161 138 aaKnown RBP0.54□□□□□ -2.32
SGIP1-208ENST00000468570 SLC25A26Q70HW3 274 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 KCNRGQ8N5I3 272 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 SMIM7Q9BQ49 75 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 NOP16Q9Y3C1 178 aaKnown RBP0.54□□□□□ -2.32
SGIP1-208ENST00000468570 KDM3BQ7LBC6 1761 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 BTAF1O14981 1849 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 KTN1Q86UP2 1357 aaKnown RBP0.54□□□□□ -2.32
SGIP1-208ENST00000468570 DAPK1P53355 1430 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 POLA1P09884 1462 aaPredicted RBP0.54□□□□□ -2.32
SGIP1-208ENST00000468570 CCDC18Q5T9S5 1454 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 IFT140Q96RY7 1462 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 KDM5DQ9BY66 1539 aa0.54□□□□□ -2.32
SGIP1-208ENST00000468570 NINQ8N4C6 2090 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 CNTRLQ7Z7A1 2325 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 LTN1O94822 1766 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 AFDNP55196 1824 aaKnown RBP0.53□□□□□ -2.32
SGIP1-208ENST00000468570 A0A1W2PRS3 328 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 TCRBV3S1A0A5B6 114 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 CLPSL1A2RUU4 121 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 RBAKDNA6NC62 111 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 APOC4-APOC2K7ER74 178 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 SNAPC5O75971 98 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 APOC2P02655 101 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 MT-ATP8P03928 68 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 IFITM1P13164 125 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 FXYD6P3P58550 94 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 S100A10P60903 97 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 COL5A1-AS1Q5SY13 56 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 C12orf73Q69YU5 71 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 OR2T2Q6IF00 324 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 DEFB132Q7Z7B7 95 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 C4orf33Q8N1A6 199 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 DYNLRB2Q8TF09 96 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 SPANXDQ9BXN6 97 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 DPH3P1Q9H4G8 78 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 NDUFA12Q9UI09 145 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 MYH4Q9Y623 1939 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 ANKRD36BQ8N2N9 1353 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 SCAPERQ9BY12 1400 aa0.53□□□□□ -2.32
SGIP1-208ENST00000468570 CDK12Q9NYV4 1490 aaPredicted RBP0.53□□□□□ -2.33
SGIP1-208ENST00000468570 ABCA8O94911 1581 aa0.53□□□□□ -2.33
SGIP1-208ENST00000468570 ADAMTS12P58397 1594 aa0.53□□□□□ -2.33
SGIP1-208ENST00000468570 LRRC37A3O60309 1634 aa0.53□□□□□ -2.33
SGIP1-208ENST00000468570 KIF14Q15058 1648 aa0.53□□□□□ -2.33
SGIP1-208ENST00000468570 ZC3H13Q5T200 1668 aaKnown RBP0.53□□□□□ -2.33
SGIP1-208ENST00000468570 NUP188Q5SRE5 1749 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 RGPD2P0DJD1 1756 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 LOC107984156A0A0G2JMH3 177 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 NDUFB6O95139 128 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 IGHV3-30P01768 117 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 CCKP06307 115 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 PIRTP0C851 137 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 IGLC1P0CG04 106 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 IGHV3-30-5P0DP03 117 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 SLC25A6P12236 298 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 PDE6GP18545 87 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 RPL37AP61513 92 aaKnown RBP0.52□□□□□ -2.33
SGIP1-208ENST00000468570 NPC2P61916 151 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 RHOHQ15669 191 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 IQCJQ1A5X6 159 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 SLC48A1Q6P1K1 146 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 CSAG1Q6PB30 78 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 Q6ZQY7 126 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 GTF2H5Q6ZYL4 71 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 C5orf38Q86SI9 138 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 ARL17AQ8IVW1 177 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 Q8N6K4 173 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 TSKUQ8WUA8 353 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 C10orf82Q8WW14 230 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 PPDPFLQ8WWR9 84 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 LCN9Q8WX39 176 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 COPS9Q8WXC6 57 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 TMEM141Q96I45 108 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 AQP10Q96PS8 301 aa0.52□□□□□ -2.33
SGIP1-208ENST00000468570 TMEM242Q9NWH2 141 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms