RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 KHDC3LQ587J8 217 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 Q6ZS92 163 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 LHFPL1Q86WI0 220 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 OR5D14Q8NGL3 314 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 SMIM4Q8WVI0 70 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 PRELID3AQ96N28 172 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 TMEM191AQ9H0A3 160 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 SMDT1Q9H4I9 107 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 TP73-AS1Q9UF72 201 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 EPDR1Q9UM22 224 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 U3KQK5 164 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 ZFHX3Q15911 3703 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 HIVEP3Q5T1R4 2406 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 SPTBN1Q01082 2364 aaKnown RBP2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 CEP295Q9C0D2 2601 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 CACNA1BQ00975 2339 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 IGLV2-18A0A075B6J9 118 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 FXYD6-FXYD2A0A087WZ82 144 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 TRBV27A0A0K0K1C4 114 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 ZNF736B4DX44 427 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 UBL3O95164 117 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 IFNA17P01571 189 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 GYPAP02724 150 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 ZNF728P0DKX0 622 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 TPT1P13693 172 aaKnown RBP2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 ZNF14P17017 642 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 GNG4P50150 75 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 S100A10P60903 97 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 PCBD1P61457 104 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 PKIAP61925 76 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 CCL8P80075 99 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 LGALS9BQ3B8N2 356 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 SPINK9Q5DT21 86 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 LGALS9CQ6DKI2 356 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 Q6ZQT7 251 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 LYPD6Q86Y78 171 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 KCNRGQ8N5I3 272 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 C3orf22Q8N5N4 141 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 KLF14Q8TD94 323 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 DCANP1Q8TF63 244 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 FXYD6Q9H0Q3 95 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 CST11Q9H112 138 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 C11orf1Q9H5F2 150 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 NHP2Q9NX24 153 aaKnown RBP2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 ZFP30Q9Y2G7 519 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 NOP16Q9Y3C1 178 aaKnown RBP2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 MALRD1Q5VYJ5 2156 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 COL12A1Q99715 3063 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 NACAE9PAV3 2078 aa2.24□□□□□ -2.05
HMGB1P25-201ENST00000468402 MED13LQ71F56 2210 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 ITPR1Q14643 2758 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 CRYBG3Q68DQ2 2970 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 RELNP78509 3460 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 IGKV1OR2-108A0A075B7D4 117 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 A0A1B0GVY2 172 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 C16orf90A8MZG2 172 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 UQCRQO14949 82 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 CYB5AP00167 134 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 IGLV3-1P01715 115 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 CGB3P0DN86 165 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 CGB7P0DN87 165 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 PRB4P10163 310 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 HIST1H1DP16402 221 aaKnown RBP2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 COL8A2P25067 703 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 PSMB8P28062 276 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 LINC00315P59091 139 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 MRPS36P82909 103 aaKnown RBP2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 MEIG1Q5JSS6 88 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 FAM74A1Q5RGS3 127 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 SPINT4Q6UDR6 99 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 TEX261Q6UWH6 196 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 TMEM14EPQ6UXP3 125 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 PHF5AQ7RTV0 110 aaKnown RBP2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 ATOH7Q8N100 152 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 RNF182Q8N6D2 247 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 FAM216BQ8N7L0 139 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 WFDC11Q8NEX6 87 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 ZNF431Q8TF32 576 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 AQP3Q92482 292 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 RNASE6Q93091 150 aaKnown RBP2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 RAB37Q96AX2 223 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 OR4C12Q96R67 309 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 TTTY13Q9BZ97 58 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 CST9LQ9H4G1 147 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 LINC00588Q9Y4M8 146 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 CR1P17927 2039 aa2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 TPRP12270 2363 aaKnown RBP2.23□□□□□ -2.05
HMGB1P25-201ENST00000468402 SPTA1P02549 2419 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 CSMD1Q96PZ7 3565 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 IGHV3OR16-8A0A075B7F1 116 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 TRAV14DV4A0A0A6YYC5 116 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 H3BQ85 93 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 H3BT86 120 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 LECT2O14960 151 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 NDUFB6O95139 128 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 CFDP00746 253 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 IGHV3-53P01767 116 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 MSMBP08118 114 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 GZMBP10144 247 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms