RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 DERL1Q9BUN8 251 aa11.65□□□□□ -0.54
LINC00888-201ENST00000468380 GFRA4Q9GZZ7 299 aa11.65□□□□□ -0.54
LINC00888-201ENST00000468380 UBE2G2P60604 165 aa11.64□□□□□ -0.55
LINC00888-201ENST00000468380 OR10AG1Q8NH19 301 aa11.64□□□□□ -0.55
LINC00888-201ENST00000468380 PRSS3P2Q8NHM4 247 aa11.64□□□□□ -0.55
LINC00888-201ENST00000468380 LYPD6BQ8NI32 183 aa11.64□□□□□ -0.55
LINC00888-201ENST00000468380 ENKURQ8TC29 256 aa11.64□□□□□ -0.55
LINC00888-201ENST00000468380 PSMG3Q9BT73 122 aaPredicted RBP11.64□□□□□ -0.55
LINC00888-201ENST00000468380 ZFP30Q9Y2G7 519 aa11.64□□□□□ -0.55
LINC00888-201ENST00000468380 INMT-MINDY4F8WBC2 141 aa11.63□□□□□ -0.55
LINC00888-201ENST00000468380 MAJINQ3KP22 176 aa11.63□□□□□ -0.55
LINC00888-201ENST00000468380 TMEM97Q5BJF2 176 aa11.63□□□□□ -0.55
LINC00888-201ENST00000468380 ACTR3CQ9C0K3 210 aaPredicted RBP11.63□□□□□ -0.55
LINC00888-201ENST00000468380 IGLV4-60A0A075B6I1 120 aa11.62□□□□□ -0.55
LINC00888-201ENST00000468380 TRBV25-1A0A075B6N4 114 aa11.62□□□□□ -0.55
LINC00888-201ENST00000468380 TRAV8-4A0A0B4J246 113 aa11.62□□□□□ -0.55
LINC00888-201ENST00000468380 P01737 135 aa11.62□□□□□ -0.55
LINC00888-201ENST00000468380 MBP02144 154 aa11.62□□□□□ -0.55
LINC00888-201ENST00000468380 SRSF9Q13242 221 aaKnown RBP eCLIP11.62□□□□□ -0.55
LINC00888-201ENST00000468380 ZNF726P1Q15940 193 aa11.62□□□□□ -0.55
LINC00888-201ENST00000468380 IQCJQ1A5X6 159 aa11.62□□□□□ -0.55
LINC00888-201ENST00000468380 SPINK6Q6UWN8 80 aa11.62□□□□□ -0.55
LINC00888-201ENST00000468380 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.62□□□□□ -0.55
LINC00888-201ENST00000468380 IGKV2-24A0A0C4DH68 120 aa11.61□□□□□ -0.55
LINC00888-201ENST00000468380 MUC21A0A140T8X8 626 aa11.61□□□□□ -0.55
LINC00888-201ENST00000468380 FAM74A7A6NL05 159 aa11.61□□□□□ -0.55
LINC00888-201ENST00000468380 SERF2P84101 59 aa11.61□□□□□ -0.55
LINC00888-201ENST00000468380 C15orf56Q8N910 161 aa11.61□□□□□ -0.55
LINC00888-201ENST00000468380 HIST1H2BAQ96A08 127 aa11.61□□□□□ -0.55
LINC00888-201ENST00000468380 KRTAP9-2Q9BYQ4 174 aa11.61□□□□□ -0.55
LINC00888-201ENST00000468380 TNFSF18Q9UNG2 199 aa11.61□□□□□ -0.55
LINC00888-201ENST00000468380 F5H697 171 aa11.6□□□□□ -0.55
LINC00888-201ENST00000468380 DEFA3P59666 94 aa11.6□□□□□ -0.55
LINC00888-201ENST00000468380 REG3GQ6UW15 175 aa11.6□□□□□ -0.55
LINC00888-201ENST00000468380 STPG4Q8N801 248 aa11.6□□□□□ -0.55
LINC00888-201ENST00000468380 SSNA1O43805 119 aa11.59□□□□□ -0.55
LINC00888-201ENST00000468380 NDUFS6O75380 124 aaKnown RBP11.59□□□□□ -0.55
LINC00888-201ENST00000468380 IFITM3Q01628 133 aa11.59□□□□□ -0.55
LINC00888-201ENST00000468380 ZNF471Q9BX82 626 aaPredicted RBP11.59□□□□□ -0.55
LINC00888-201ENST00000468380 IGHV1-24A0A0C4DH33 117 aa11.58□□□□□ -0.56
LINC00888-201ENST00000468380 LTAP01374 205 aa11.58□□□□□ -0.56
LINC00888-201ENST00000468380 RPS10P46783 165 aaKnown RBP11.58□□□□□ -0.56
LINC00888-201ENST00000468380 INO80EQ8NBZ0 244 aaPredicted RBP11.58□□□□□ -0.56
LINC00888-201ENST00000468380 FMC1Q96HJ9 113 aa11.58□□□□□ -0.56
LINC00888-201ENST00000468380 MARVELD1Q9BSK0 173 aa11.58□□□□□ -0.56
LINC00888-201ENST00000468380 SSBP4Q9BWG4 385 aaPredicted RBP11.58□□□□□ -0.56
LINC00888-201ENST00000468380 A0A1B0GUV1 79 aa11.57□□□□□ -0.56
LINC00888-201ENST00000468380 GZMBP10144 247 aa11.57□□□□□ -0.56
LINC00888-201ENST00000468380 SSTP61278 116 aa11.57□□□□□ -0.56
LINC00888-201ENST00000468380 SNAI2O43623 268 aa11.56□□□□□ -0.56
LINC00888-201ENST00000468380 MUC2Q02817 5179 aa11.56□□□□□ -0.56
LINC00888-201ENST00000468380 NKX6-2Q9C056 277 aaPredicted RBP11.56□□□□□ -0.56
LINC00888-201ENST00000468380 A0A096LNI7 61 aa11.55□□□□□ -0.56
LINC00888-201ENST00000468380 A6NHS1 94 aa11.55□□□□□ -0.56
LINC00888-201ENST00000468380 UBE2G1P62253 170 aa11.55□□□□□ -0.56
LINC00888-201ENST00000468380 HIGD2BQ4VC39 106 aa11.55□□□□□ -0.56
LINC00888-201ENST00000468380 AQP10Q96PS8 301 aa11.55□□□□□ -0.56
LINC00888-201ENST00000468380 CTXND1A0A1B0GTU2 59 aa11.54□□□□□ -0.56
LINC00888-201ENST00000468380 SPANXN1Q5VSR9 72 aa11.54□□□□□ -0.56
LINC00888-201ENST00000468380 GAGE12HA6NDE8 117 aa11.53□□□□□ -0.56
LINC00888-201ENST00000468380 M0QY20 66 aa11.53□□□□□ -0.56
LINC00888-201ENST00000468380 UPK1BO75841 260 aa11.53□□□□□ -0.56
LINC00888-201ENST00000468380 CXCL1P09341 107 aa11.52□□□□□ -0.57
LINC00888-201ENST00000468380 OR5AL1P0C617 328 aa11.52□□□□□ -0.57
LINC00888-201ENST00000468380 CFAP161Q6P656 301 aa11.52□□□□□ -0.57
LINC00888-201ENST00000468380 TMEM243Q9BU79 118 aa11.52□□□□□ -0.57
LINC00888-201ENST00000468380 RPL7L1Q6DKI1 246 aaKnown RBP11.5□□□□□ -0.57
LINC00888-201ENST00000468380 Q6ZRP5 223 aa11.5□□□□□ -0.57
LINC00888-201ENST00000468380 H7C1H1 209 aa11.49□□□□□ -0.57
LINC00888-201ENST00000468380 SMIM17P0DL12 118 aa11.49□□□□□ -0.57
LINC00888-201ENST00000468380 SULT1A2P50226 295 aa11.49□□□□□ -0.57
LINC00888-201ENST00000468380 NKX2-5P52952 324 aaPredicted RBP11.49□□□□□ -0.57
LINC00888-201ENST00000468380 AKR1C3P42330 323 aa11.48□□□□□ -0.57
LINC00888-201ENST00000468380 Q5BKY6 102 aa11.48□□□□□ -0.57
LINC00888-201ENST00000468380 SUMO4Q6EEV6 95 aa11.48□□□□□ -0.57
LINC00888-201ENST00000468380 S100ZQ8WXG8 99 aa11.48□□□□□ -0.57
LINC00888-201ENST00000468380 MLST8Q9BVC4 326 aa11.48□□□□□ -0.57
LINC00888-201ENST00000468380 IGKV3OR2-268A0A0C4DH90 116 aa11.47□□□□□ -0.57
LINC00888-201ENST00000468380 MGPP08493 103 aa11.47□□□□□ -0.57
LINC00888-201ENST00000468380 CST9LP1Q5W188 147 aa11.47□□□□□ -0.57
LINC00888-201ENST00000468380 LINC00299Q6ZSB3 139 aa11.47□□□□□ -0.57
LINC00888-201ENST00000468380 AP1S3Q96PC3 154 aa11.47□□□□□ -0.57
LINC00888-201ENST00000468380 GVQW2A0A096LPI5 108 aaPredicted RBP11.46□□□□□ -0.57
LINC00888-201ENST00000468380 FHITP49789 147 aa11.46□□□□□ -0.57
LINC00888-201ENST00000468380 CHCHD10Q8WYQ3 142 aaPredicted RBP11.45□□□□□ -0.58
LINC00888-201ENST00000468380 MAP1LC3B2A6NCE7 125 aa11.44□□□□□ -0.58
LINC00888-201ENST00000468380 LINC00526Q96FQ7 95 aa11.44□□□□□ -0.58
LINC00888-201ENST00000468380 PGLYRP4Q96LB8 373 aa11.44□□□□□ -0.58
LINC00888-201ENST00000468380 TCEAL7Q9BRU2 100 aa11.44□□□□□ -0.58
LINC00888-201ENST00000468380 MAP1LC3BQ9GZQ8 125 aa11.44□□□□□ -0.58
LINC00888-201ENST00000468380 NDUFA13Q9P0J0 144 aa11.44□□□□□ -0.58
LINC00888-201ENST00000468380 LINC00474Q9P2X8 69 aa11.44□□□□□ -0.58
LINC00888-201ENST00000468380 UBE2L6O14933 153 aa11.43□□□□□ -0.58
LINC00888-201ENST00000468380 BAGE2Q86Y30 109 aa11.43□□□□□ -0.58
LINC00888-201ENST00000468380 STOML3Q8TAV4 291 aa11.43□□□□□ -0.58
LINC00888-201ENST00000468380 FAM231BA6NCW3 169 aa11.42□□□□□ -0.58
LINC00888-201ENST00000468380 PAGE4O60829 102 aa11.42□□□□□ -0.58
LINC00888-201ENST00000468380 AKR1C8PQ5T2L2 129 aa11.42□□□□□ -0.58
LINC00888-201ENST00000468380 RASL11AQ6T310 242 aa11.42□□□□□ -0.58
LINC00888-201ENST00000468380 AMTP48728 403 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms