RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 TTC32Q5I0X7 151 aa5.03□□□□□ -1.6
SCAF4-204ENST00000467731 SH2D6Q7Z4S9 175 aa5.03□□□□□ -1.6
SCAF4-204ENST00000467731 MLST8Q9BVC4 326 aa5.03□□□□□ -1.6
SCAF4-204ENST00000467731 LENEPQ9Y5L5 61 aa5.03□□□□□ -1.6
SCAF4-204ENST00000467731 TRBV6-1A0A0K0K1D8 114 aa5.03□□□□□ -1.6
SCAF4-204ENST00000467731 C9JCJ5 164 aa5.03□□□□□ -1.6
SCAF4-204ENST00000467731 IGLV2-8P01709 118 aa5.03□□□□□ -1.6
SCAF4-204ENST00000467731 IFITM1P13164 125 aa5.03□□□□□ -1.6
SCAF4-204ENST00000467731 PRR9Q5T870 116 aa5.03□□□□□ -1.6
SCAF4-204ENST00000467731 ZFAND2AQ8N6M9 145 aa5.03□□□□□ -1.6
SCAF4-204ENST00000467731 TSKUQ8WUA8 353 aa5.03□□□□□ -1.6
SCAF4-204ENST00000467731 ODF3Q96PU9 254 aa5.03□□□□□ -1.6
SCAF4-204ENST00000467731 TP73-AS1Q9UF72 201 aa5.03□□□□□ -1.6
SCAF4-204ENST00000467731 A0A1B0GX51 115 aa5.02□□□□□ -1.61
SCAF4-204ENST00000467731 C9JAW5 83 aa5.02□□□□□ -1.61
SCAF4-204ENST00000467731 LINC00694P0DN24 101 aa5.02□□□□□ -1.61
SCAF4-204ENST00000467731 FOXI1Q12951 378 aa5.02□□□□□ -1.61
SCAF4-204ENST00000467731 ATP6V0E2Q8NHE4 81 aa5.02□□□□□ -1.61
SCAF4-204ENST00000467731 TMEM101Q96IK0 257 aa5.02□□□□□ -1.61
SCAF4-204ENST00000467731 KLLNB2CW77 178 aa5.02□□□□□ -1.61
SCAF4-204ENST00000467731 K7EIL1 84 aa5.02□□□□□ -1.61
SCAF4-204ENST00000467731 K7EN84 100 aa5.02□□□□□ -1.61
SCAF4-204ENST00000467731 MGST1P10620 155 aaKnown RBP5.02□□□□□ -1.61
SCAF4-204ENST00000467731 EMP1P54849 157 aa5.02□□□□□ -1.61
SCAF4-204ENST00000467731 RPS28P62857 69 aaKnown RBP5.02□□□□□ -1.61
SCAF4-204ENST00000467731 GAGE2BQ13066 116 aa5.02□□□□□ -1.61
SCAF4-204ENST00000467731 GAGE2EQ4V326 116 aa5.02□□□□□ -1.61
SCAF4-204ENST00000467731 FAM159AQ6UWV7 190 aa5.02□□□□□ -1.61
SCAF4-204ENST00000467731 Q6ZQT7 251 aa5.02□□□□□ -1.61
SCAF4-204ENST00000467731 OCC1Q8TAD7 63 aa5.02□□□□□ -1.61
SCAF4-204ENST00000467731 XCL2Q9UBD3 114 aa5.02□□□□□ -1.61
SCAF4-204ENST00000467731 GAGE2DQ9UEU5 116 aa5.02□□□□□ -1.61
SCAF4-204ENST00000467731 CRXO43186 299 aaPredicted RBP5.01□□□□□ -1.61
SCAF4-204ENST00000467731 MT-ND6P03923 174 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 GIG44P09565 113 aaPredicted RBP5.01□□□□□ -1.61
SCAF4-204ENST00000467731 LEPP41159 167 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 ZNF80P51504 273 aaPredicted RBP5.01□□□□□ -1.61
SCAF4-204ENST00000467731 C2orf91Q6ZV80 131 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 FAM19A2Q8N3H0 131 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 RAB37Q96AX2 223 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 TMEM70Q9BUB7 260 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 GNB1LQ9BYB4 327 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 SPANXCQ9NY87 97 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 COL7A1Q02388 2944 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 LOC107984640A0A0U1RRK4 108 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 A8MZ25 164 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 SYS1-DBNDD2H3BUS1 97 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 APOMO95445 188 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 COX8AP10176 69 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 RNASE4P34096 147 aaKnown RBP5.01□□□□□ -1.61
SCAF4-204ENST00000467731 CRIP1P50238 77 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 LINC00322Q6ZN03 302 aaPredicted RBP5.01□□□□□ -1.61
SCAF4-204ENST00000467731 COX8CQ7Z4L0 72 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 TRBV20-1A0A075B6N2 111 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 TRAV12-3A0A0B4J271 114 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 FRMD6-AS1P0C7T7 363 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 MORN3Q6PF18 240 aaPredicted RBP5.01□□□□□ -1.61
SCAF4-204ENST00000467731 ZNRF2Q8NHG8 242 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 TMEM191AQ9H0A3 160 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 LY96Q9Y6Y9 160 aa5.01□□□□□ -1.61
SCAF4-204ENST00000467731 TENM3Q9P273 2699 aa5□□□□□ -1.61
SCAF4-204ENST00000467731 hDV102S1A0JD36 115 aa5□□□□□ -1.61
SCAF4-204ENST00000467731 SNURFLB1AK76 121 aa5□□□□□ -1.61
SCAF4-204ENST00000467731 SMIM13P0DJ93 91 aa5□□□□□ -1.61
SCAF4-204ENST00000467731 RBMY1A1P0DJD3 496 aaKnown RBP5□□□□□ -1.61
SCAF4-204ENST00000467731 RBMY1CP0DJD4 496 aa5□□□□□ -1.61
SCAF4-204ENST00000467731 RBMY1FQ15415 496 aaKnown RBP5□□□□□ -1.61
SCAF4-204ENST00000467731 GAGE13Q4V321 117 aa5□□□□□ -1.61
SCAF4-204ENST00000467731 Q6Q795 121 aa5□□□□□ -1.61
SCAF4-204ENST00000467731 PRELID3AQ96N28 172 aa5□□□□□ -1.61
SCAF4-204ENST00000467731 TMEM262E9PQX1 116 aa5□□□□□ -1.61
SCAF4-204ENST00000467731 APOC4P55056 127 aa5□□□□□ -1.61
SCAF4-204ENST00000467731 DEFB121Q5J5C9 76 aa5□□□□□ -1.61
SCAF4-204ENST00000467731 RASL11AQ6T310 242 aa5□□□□□ -1.61
SCAF4-204ENST00000467731 GTSF1Q8WW33 167 aa5□□□□□ -1.61
SCAF4-204ENST00000467731 V9GYY9 64 aa5□□□□□ -1.61
SCAF4-204ENST00000467731 SH2D1AO60880 128 aa4.99□□□□□ -1.61
SCAF4-204ENST00000467731 INSP01308 110 aa4.99□□□□□ -1.61
SCAF4-204ENST00000467731 CSNK1G2-AS1Q8NCQ2 148 aa4.99□□□□□ -1.61
SCAF4-204ENST00000467731 RNASE7Q9H1E1 156 aaKnown RBP4.99□□□□□ -1.61
SCAF4-204ENST00000467731 MDFICQ9P1T7 246 aa4.99□□□□□ -1.61
SCAF4-204ENST00000467731 DNAH9Q9NYC9 4486 aa4.99□□□□□ -1.61
SCAF4-204ENST00000467731 IGHV3OR16-12A0A075B7B8 117 aa4.99□□□□□ -1.61
SCAF4-204ENST00000467731 TRAV21A0A0B4J279 112 aa4.99□□□□□ -1.61
SCAF4-204ENST00000467731 TINCRA0A1B0GVN0 87 aa4.99□□□□□ -1.61
SCAF4-204ENST00000467731 HSBP1O75506 76 aa4.99□□□□□ -1.61
SCAF4-204ENST00000467731 DEFB135Q30KP9 77 aa4.99□□□□□ -1.61
SCAF4-204ENST00000467731 IBA57Q5T440 356 aaKnown RBP4.99□□□□□ -1.61
SCAF4-204ENST00000467731 PRADC1Q9BSG0 188 aa4.99□□□□□ -1.61
SCAF4-204ENST00000467731 C11orf21Q9P2W6 132 aa4.99□□□□□ -1.61
SCAF4-204ENST00000467731 HUWE1Q7Z6Z7 4374 aaKnown RBP4.99□□□□□ -1.61
SCAF4-204ENST00000467731 C19orf71A6NCJ1 209 aa4.98□□□□□ -1.61
SCAF4-204ENST00000467731 TMEM136Q6ZRR5 245 aa4.98□□□□□ -1.61
SCAF4-204ENST00000467731 C1orf158Q8N1D5 194 aa4.98□□□□□ -1.61
SCAF4-204ENST00000467731 RASL10AQ92737 203 aa4.98□□□□□ -1.61
SCAF4-204ENST00000467731 LINC01587Q99440 93 aa4.98□□□□□ -1.61
SCAF4-204ENST00000467731 IL36BQ9NZH7 164 aa4.98□□□□□ -1.61
SCAF4-204ENST00000467731 A0A1B0GWB2 263 aa4.98□□□□□ -1.61
SCAF4-204ENST00000467731 PRM2P04554 102 aa4.98□□□□□ -1.61
SCAF4-204ENST00000467731 HTN1P15515 57 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms