RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 ZNF664Q8N3J9 261 aa13.47□□□□□ -0.25
CHRNA4-203ENST00000467563 KIR2DL5BA0A0G2JN68 375 aa13.46□□□□□ -0.25
CHRNA4-203ENST00000467563 KIR2DL5BA0A0G2JPC4 375 aa13.46□□□□□ -0.25
CHRNA4-203ENST00000467563 KIR2DL5AQ8N109 375 aa13.46□□□□□ -0.25
CHRNA4-203ENST00000467563 KIR2DL5BQ8NHK3 375 aa13.46□□□□□ -0.25
CHRNA4-203ENST00000467563 DEFB104AQ8WTQ1 72 aa13.46□□□□□ -0.25
CHRNA4-203ENST00000467563 C18orf15Q96N68 181 aa13.46□□□□□ -0.25
CHRNA4-203ENST00000467563 Q9UF83 564 aa13.46□□□□□ -0.25
CHRNA4-203ENST00000467563 NUDT3O95989 172 aa13.46□□□□□ -0.26
CHRNA4-203ENST00000467563 TRBV27A0A0K0K1C4 114 aa13.45□□□□□ -0.26
CHRNA4-203ENST00000467563 H7C1H1 209 aa13.45□□□□□ -0.26
CHRNA4-203ENST00000467563 K7EMI3 77 aa13.45□□□□□ -0.26
CHRNA4-203ENST00000467563 VCYO14598 125 aa13.45□□□□□ -0.26
CHRNA4-203ENST00000467563 IGHV4-30-4P0DP06 118 aa13.45□□□□□ -0.26
CHRNA4-203ENST00000467563 ORMDL2Q53FV1 153 aa13.45□□□□□ -0.26
CHRNA4-203ENST00000467563 PET117Q6UWS5 81 aa13.45□□□□□ -0.26
CHRNA4-203ENST00000467563 ATOH7Q8N100 152 aa13.45□□□□□ -0.26
CHRNA4-203ENST00000467563 IFI27L1Q96BM0 104 aa13.45□□□□□ -0.26
CHRNA4-203ENST00000467563 ZNF479Q96JC4 524 aa13.45□□□□□ -0.26
CHRNA4-203ENST00000467563 OVOL2Q9BRP0 275 aa13.45□□□□□ -0.26
CHRNA4-203ENST00000467563 X6R8D5 127 aa13.45□□□□□ -0.26
CHRNA4-203ENST00000467563 APOC4P55056 127 aa13.44□□□□□ -0.26
CHRNA4-203ENST00000467563 ZFP2Q6ZN57 461 aa13.44□□□□□ -0.26
CHRNA4-203ENST00000467563 OR4C5Q8NGB2 326 aa13.44□□□□□ -0.26
CHRNA4-203ENST00000467563 PRO1933Q9H354 126 aa13.44□□□□□ -0.26
CHRNA4-203ENST00000467563 IGHV3-53P01767 116 aa13.44□□□□□ -0.26
CHRNA4-203ENST00000467563 EGFEM1PQ0D2K5 195 aa13.43□□□□□ -0.26
CHRNA4-203ENST00000467563 DEFB135Q30KP9 77 aa13.43□□□□□ -0.26
CHRNA4-203ENST00000467563 EMP1P54849 157 aa13.43□□□□□ -0.26
CHRNA4-203ENST00000467563 ANK2Q01484 3957 aa13.43□□□□□ -0.26
CHRNA4-203ENST00000467563 TRAV4A0A0B4J268 109 aa13.42□□□□□ -0.26
CHRNA4-203ENST00000467563 GAGE12BA1L429 117 aa13.42□□□□□ -0.26
CHRNA4-203ENST00000467563 GAGE7O76087 117 aa13.42□□□□□ -0.26
CHRNA4-203ENST00000467563 GAGE12FP0CL80 117 aa13.42□□□□□ -0.26
CHRNA4-203ENST00000467563 GAGE12GP0CL81 117 aa13.42□□□□□ -0.26
CHRNA4-203ENST00000467563 GAGE12IP0CL82 117 aa13.42□□□□□ -0.26
CHRNA4-203ENST00000467563 LINC01545Q5VT33 79 aa13.42□□□□□ -0.26
CHRNA4-203ENST00000467563 KIR2DL4Q99706 377 aa13.42□□□□□ -0.26
CHRNA4-203ENST00000467563 PMCHL2Q9BQD1 86 aa13.42□□□□□ -0.26
CHRNA4-203ENST00000467563 VAMP8Q9BV40 100 aa13.41□□□□□ -0.26
CHRNA4-203ENST00000467563 PAM16Q9Y3D7 125 aa13.41□□□□□ -0.26
CHRNA4-203ENST00000467563 PKIAP61925 76 aa13.41□□□□□ -0.26
CHRNA4-203ENST00000467563 NEXN-AS1Q8NBZ9 246 aa13.41□□□□□ -0.26
CHRNA4-203ENST00000467563 TOMM6Q96B49 74 aa13.41□□□□□ -0.26
CHRNA4-203ENST00000467563 C20orf202A1L168 122 aa13.4□□□□□ -0.26
CHRNA4-203ENST00000467563 MAJINQ3KP22 176 aa13.4□□□□□ -0.26
CHRNA4-203ENST00000467563 SMIM9A6NGZ8 99 aa13.4□□□□□ -0.27
CHRNA4-203ENST00000467563 C2orf66Q6UXQ4 117 aa13.4□□□□□ -0.27
CHRNA4-203ENST00000467563 TRGV2A0A075B6R0 118 aa13.39□□□□□ -0.27
CHRNA4-203ENST00000467563 G3V4G9 280 aa13.39□□□□□ -0.27
CHRNA4-203ENST00000467563 TNFRSF18Q9Y5U5 241 aa13.39□□□□□ -0.27
CHRNA4-203ENST00000467563 I3L3M4 83 aa13.38□□□□□ -0.27
CHRNA4-203ENST00000467563 TSHBP01222 138 aa13.38□□□□□ -0.27
CHRNA4-203ENST00000467563 TSTD3H0UI37 97 aa13.38□□□□□ -0.27
CHRNA4-203ENST00000467563 ATP5LO75964 103 aa13.38□□□□□ -0.27
CHRNA4-203ENST00000467563 OR11H2Q8NH07 326 aa13.37□□□□□ -0.27
CHRNA4-203ENST00000467563 LGALS9CQ6DKI2 356 aa13.36□□□□□ -0.27
CHRNA4-203ENST00000467563 DNAH3Q8TD57 4116 aa13.36□□□□□ -0.27
CHRNA4-203ENST00000467563 TRAV9-2A0A087WT02 112 aa13.36□□□□□ -0.27
CHRNA4-203ENST00000467563 RIPPLY3P57055 190 aa13.36□□□□□ -0.27
CHRNA4-203ENST00000467563 RPL39P62891 51 aaKnown RBP13.36□□□□□ -0.27
CHRNA4-203ENST00000467563 SCGB3A1Q96QR1 104 aa13.36□□□□□ -0.27
CHRNA4-203ENST00000467563 PRSS1P07477 247 aa13.35□□□□□ -0.27
CHRNA4-203ENST00000467563 SPATA45Q537H7 98 aa13.35□□□□□ -0.27
CHRNA4-203ENST00000467563 SLC25A29Q8N8R3 303 aa13.35□□□□□ -0.27
CHRNA4-203ENST00000467563 DNAJC30Q96LL9 226 aa13.35□□□□□ -0.27
CHRNA4-203ENST00000467563 CYSLTR1Q9Y271 337 aa13.35□□□□□ -0.27
CHRNA4-203ENST00000467563 TP53TG1Q9Y2A0 90 aa13.35□□□□□ -0.27
CHRNA4-203ENST00000467563 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.35□□□□□ -0.27
CHRNA4-203ENST00000467563 RHOHQ15669 191 aa13.35□□□□□ -0.27
CHRNA4-203ENST00000467563 LINC00612Q8N6U2 182 aa13.35□□□□□ -0.27
CHRNA4-203ENST00000467563 DKK2Q9UBU2 259 aa13.35□□□□□ -0.27
CHRNA4-203ENST00000467563 K7EQD1 137 aa13.34□□□□□ -0.27
CHRNA4-203ENST00000467563 DEFB130BP0DP73 79 aa13.34□□□□□ -0.27
CHRNA4-203ENST00000467563 DEFB130AP0DP74 79 aa13.34□□□□□ -0.27
CHRNA4-203ENST00000467563 RNF183Q96D59 192 aa13.34□□□□□ -0.27
CHRNA4-203ENST00000467563 hDV102S1A0JD36 115 aa13.33□□□□□ -0.27
CHRNA4-203ENST00000467563 LINC00587B1AMM8 73 aa13.33□□□□□ -0.27
CHRNA4-203ENST00000467563 DEFB4AO15263 64 aa13.33□□□□□ -0.27
CHRNA4-203ENST00000467563 ODF1Q14990 250 aa13.33□□□□□ -0.27
CHRNA4-203ENST00000467563 MDFIQ99750 246 aa13.33□□□□□ -0.27
CHRNA4-203ENST00000467563 IGHV4-28A0A0C4DH34 117 aa13.33□□□□□ -0.28
CHRNA4-203ENST00000467563 G0S2P27469 103 aa13.33□□□□□ -0.28
CHRNA4-203ENST00000467563 ERASQ7Z444 233 aa13.33□□□□□ -0.28
CHRNA4-203ENST00000467563 ZMAT5Q9UDW3 170 aaKnown RBP13.33□□□□□ -0.28
CHRNA4-203ENST00000467563 A8MZ25 164 aa13.32□□□□□ -0.28
CHRNA4-203ENST00000467563 SAMD5Q5TGI4 173 aa13.32□□□□□ -0.28
CHRNA4-203ENST00000467563 ZNRF2Q8NHG8 242 aa13.32□□□□□ -0.28
CHRNA4-203ENST00000467563 NOTCH1P46531 2555 aa13.32□□□□□ -0.28
CHRNA4-203ENST00000467563 IGHV3-38A0A0C4DH36 116 aa13.32□□□□□ -0.28
CHRNA4-203ENST00000467563 TRBV10-1A0A0K0K1A3 114 aa13.32□□□□□ -0.28
CHRNA4-203ENST00000467563 IGIPA6NJ69 53 aa13.32□□□□□ -0.28
CHRNA4-203ENST00000467563 Q8NAQ8 132 aa13.32□□□□□ -0.28
CHRNA4-203ENST00000467563 PHLDA1Q8WV24 401 aaPredicted RBP13.32□□□□□ -0.28
CHRNA4-203ENST00000467563 ZMAT4Q9H898 229 aa13.32□□□□□ -0.28
CHRNA4-203ENST00000467563 TRBV7-3A0A075B6L6 115 aa13.31□□□□□ -0.28
CHRNA4-203ENST00000467563 CIDEAO60543 219 aa13.31□□□□□ -0.28
CHRNA4-203ENST00000467563 DDTP30046 118 aa13.31□□□□□ -0.28
CHRNA4-203ENST00000467563 FHL2Q14192 279 aa13.31□□□□□ -0.28
CHRNA4-203ENST00000467563 FAM222AQ5U5X8 452 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms