RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 RAB19A4D1S5 217 aa9.72□□□□□ -0.85
ATPAF2-204ENST00000467560 UBE2D3P61077 147 aa9.72□□□□□ -0.85
ATPAF2-204ENST00000467560 UBE2D2P62837 147 aa9.72□□□□□ -0.85
ATPAF2-204ENST00000467560 FAM74A3Q4VXF1 159 aa9.72□□□□□ -0.85
ATPAF2-204ENST00000467560 ZFP82Q8N141 532 aa9.72□□□□□ -0.85
ATPAF2-204ENST00000467560 DERL1Q9BUN8 251 aa9.72□□□□□ -0.85
ATPAF2-204ENST00000467560 KLK12Q9UKR0 248 aa9.72□□□□□ -0.85
ATPAF2-204ENST00000467560 CXCL1P09341 107 aa9.71□□□□□ -0.86
ATPAF2-204ENST00000467560 CENPWQ5EE01 88 aa9.71□□□□□ -0.86
ATPAF2-204ENST00000467560 Q6ZSA8 131 aa9.71□□□□□ -0.86
ATPAF2-204ENST00000467560 SRP19P09132 144 aaKnown RBP9.7□□□□□ -0.86
ATPAF2-204ENST00000467560 TRBV20OR9-2A0A075B6H5 130 aa9.69□□□□□ -0.86
ATPAF2-204ENST00000467560 TRBV7-3A0A075B6L6 115 aa9.69□□□□□ -0.86
ATPAF2-204ENST00000467560 TRBV10-1A0A0K0K1A3 114 aa9.69□□□□□ -0.86
ATPAF2-204ENST00000467560 FAM229AH3BQW9 127 aa9.69□□□□□ -0.86
ATPAF2-204ENST00000467560 IGLV2-8P01709 118 aa9.69□□□□□ -0.86
ATPAF2-204ENST00000467560 PRR27Q6MZM9 219 aa9.69□□□□□ -0.86
ATPAF2-204ENST00000467560 NEXN-AS1Q8NBZ9 246 aa9.69□□□□□ -0.86
ATPAF2-204ENST00000467560 OR10G8Q8NGN5 311 aa9.69□□□□□ -0.86
ATPAF2-204ENST00000467560 SSBP4Q9BWG4 385 aaPredicted RBP9.69□□□□□ -0.86
ATPAF2-204ENST00000467560 LRP1Q07954 4544 aaKnown RBP9.68□□□□□ -0.86
ATPAF2-204ENST00000467560 IGKV2D-24A0A075B6R9 120 aa9.68□□□□□ -0.86
ATPAF2-204ENST00000467560 SNAI2O43623 268 aa9.68□□□□□ -0.86
ATPAF2-204ENST00000467560 SSTP61278 116 aa9.68□□□□□ -0.86
ATPAF2-204ENST00000467560 RPL36AP83881 106 aaKnown RBP9.68□□□□□ -0.86
ATPAF2-204ENST00000467560 UQCC3Q6UW78 93 aa9.68□□□□□ -0.86
ATPAF2-204ENST00000467560 RPL36ALQ969Q0 106 aaKnown RBP9.68□□□□□ -0.86
ATPAF2-204ENST00000467560 UBE2WQ96B02 151 aa9.68□□□□□ -0.86
ATPAF2-204ENST00000467560 SMIM7Q9BQ49 75 aa9.68□□□□□ -0.86
ATPAF2-204ENST00000467560 URGCP-MRPS24S4R325 110 aa9.68□□□□□ -0.86
ATPAF2-204ENST00000467560 RAB4BP61018 213 aa9.67□□□□□ -0.86
ATPAF2-204ENST00000467560 ZNF56Q15929 161 aa9.67□□□□□ -0.86
ATPAF2-204ENST00000467560 DAZAP1Q96EP5 407 aaKnown RBP9.67□□□□□ -0.86
ATPAF2-204ENST00000467560 KIF25-AS1Q9Y6Z4 181 aa9.67□□□□□ -0.86
ATPAF2-204ENST00000467560 A0A087WX48 190 aa9.66□□□□□ -0.86
ATPAF2-204ENST00000467560 TRBV6-8A0A0A6YYG3 113 aa9.66□□□□□ -0.86
ATPAF2-204ENST00000467560 C19orf71A6NCJ1 209 aa9.66□□□□□ -0.86
ATPAF2-204ENST00000467560 ZNF727A8MUV8 499 aa9.66□□□□□ -0.86
ATPAF2-204ENST00000467560 RPS20P60866 119 aaKnown RBP9.66□□□□□ -0.86
ATPAF2-204ENST00000467560 ATRAIDQ6UW56 229 aa9.66□□□□□ -0.86
ATPAF2-204ENST00000467560 ENHOQ6UWT2 76 aa9.66□□□□□ -0.86
ATPAF2-204ENST00000467560 XKRY2A2RUG3 117 aa9.65□□□□□ -0.86
ATPAF2-204ENST00000467560 OR5AL1P0C617 328 aa9.65□□□□□ -0.86
ATPAF2-204ENST00000467560 GZMBP10144 247 aa9.65□□□□□ -0.86
ATPAF2-204ENST00000467560 MPV17L2Q567V2 206 aa9.65□□□□□ -0.86
ATPAF2-204ENST00000467560 NTM-AS1Q6ZSK4 140 aa9.65□□□□□ -0.86
ATPAF2-204ENST00000467560 FAM231DQ6ZW35 169 aa9.65□□□□□ -0.86
ATPAF2-204ENST00000467560 OCC1Q8TAD7 63 aa9.65□□□□□ -0.86
ATPAF2-204ENST00000467560 CHCHD7Q9BUK0 85 aa9.65□□□□□ -0.86
ATPAF2-204ENST00000467560 COX11Q9Y6N1 276 aa9.65□□□□□ -0.86
ATPAF2-204ENST00000467560 TMEM262E9PQX1 116 aa9.64□□□□□ -0.87
ATPAF2-204ENST00000467560 P01737 135 aa9.64□□□□□ -0.87
ATPAF2-204ENST00000467560 TMEM241Q24JQ0 296 aa9.64□□□□□ -0.87
ATPAF2-204ENST00000467560 SPANXN1Q5VSR9 72 aa9.64□□□□□ -0.87
ATPAF2-204ENST00000467560 SCXQ7RTU7 201 aa9.64□□□□□ -0.87
ATPAF2-204ENST00000467560 LINC00528Q8N1L1 170 aa9.64□□□□□ -0.87
ATPAF2-204ENST00000467560 Q8N976 141 aa9.64□□□□□ -0.87
ATPAF2-204ENST00000467560 RMI2Q96E14 147 aa9.64□□□□□ -0.87
ATPAF2-204ENST00000467560 LINC00862A6NCI5 91 aa9.63□□□□□ -0.87
ATPAF2-204ENST00000467560 SRSF3P84103 164 aaKnown RBP9.63□□□□□ -0.87
ATPAF2-204ENST00000467560 LINC01551Q86U37 167 aa9.63□□□□□ -0.87
ATPAF2-204ENST00000467560 C15orf54Q8N8G6 183 aa9.63□□□□□ -0.87
ATPAF2-204ENST00000467560 NAT8Q9UHE5 227 aa9.63□□□□□ -0.87
ATPAF2-204ENST00000467560 FAT3Q8TDW7 4589 aa9.62□□□□□ -0.87
ATPAF2-204ENST00000467560 C9JQL5 133 aa9.62□□□□□ -0.87
ATPAF2-204ENST00000467560 F5H697 171 aa9.62□□□□□ -0.87
ATPAF2-204ENST00000467560 K7EN84 100 aa9.62□□□□□ -0.87
ATPAF2-204ENST00000467560 CEBPGP53567 150 aa9.62□□□□□ -0.87
ATPAF2-204ENST00000467560 CT83Q5H943 113 aa9.62□□□□□ -0.87
ATPAF2-204ENST00000467560 IGLC6P0CF74 106 aa9.61□□□□□ -0.87
ATPAF2-204ENST00000467560 KRTAP10-4P60372 401 aaPredicted RBP9.61□□□□□ -0.87
ATPAF2-204ENST00000467560 ELOBQ15370 118 aa9.61□□□□□ -0.87
ATPAF2-204ENST00000467560 NUDT10Q8NFP7 164 aa9.61□□□□□ -0.87
ATPAF2-204ENST00000467560 NUDT11Q96G61 164 aa9.61□□□□□ -0.87
ATPAF2-204ENST00000467560 CHCHD5Q9BSY4 110 aa9.61□□□□□ -0.87
ATPAF2-204ENST00000467560 F2Z2F3 143 aa9.6□□□□□ -0.87
ATPAF2-204ENST00000467560 ANGP03950 147 aaKnown RBP9.6□□□□□ -0.87
ATPAF2-204ENST00000467560 Q0VG73 95 aa9.6□□□□□ -0.87
ATPAF2-204ENST00000467560 PNRC1Q12796 327 aaPredicted RBP9.6□□□□□ -0.87
ATPAF2-204ENST00000467560 KCNIP4Q6PIL6 250 aa9.6□□□□□ -0.87
ATPAF2-204ENST00000467560 OR2D3Q8NGH3 330 aa9.6□□□□□ -0.87
ATPAF2-204ENST00000467560 TPPP3Q9BW30 176 aa9.6□□□□□ -0.87
ATPAF2-204ENST00000467560 RPP21Q9H633 154 aaKnown RBP9.6□□□□□ -0.87
ATPAF2-204ENST00000467560 OSTCQ9NRP0 149 aa9.6□□□□□ -0.87
ATPAF2-204ENST00000467560 FAM231BA6NCW3 169 aa9.59□□□□□ -0.87
ATPAF2-204ENST00000467560 A8MWL6 223 aa9.59□□□□□ -0.87
ATPAF2-204ENST00000467560 M0QY20 66 aa9.59□□□□□ -0.87
ATPAF2-204ENST00000467560 GAGE6Q13070 117 aa9.59□□□□□ -0.87
ATPAF2-204ENST00000467560 WDR73Q6P4I2 378 aa9.59□□□□□ -0.87
ATPAF2-204ENST00000467560 KRTAP26-1Q6PEX3 210 aa9.59□□□□□ -0.87
ATPAF2-204ENST00000467560 CLPSL2Q6UWE3 100 aa9.59□□□□□ -0.87
ATPAF2-204ENST00000467560 CIRBP-AS1Q8TBR5 109 aa9.59□□□□□ -0.87
ATPAF2-204ENST00000467560 AP1S3Q96PC3 154 aa9.59□□□□□ -0.87
ATPAF2-204ENST00000467560 CHAC1Q9BUX1 264 aa9.59□□□□□ -0.87
ATPAF2-204ENST00000467560 C1orf43Q9BWL3 253 aa9.59□□□□□ -0.87
ATPAF2-204ENST00000467560 RPL23P62829 140 aaKnown RBP9.58□□□□□ -0.88
ATPAF2-204ENST00000467560 RBX1P62877 108 aa9.58□□□□□ -0.88
ATPAF2-204ENST00000467560 SUMO4Q6EEV6 95 aa9.58□□□□□ -0.88
ATPAF2-204ENST00000467560 FER1L6-AS1Q8NA97 138 aa9.58□□□□□ -0.88
ATPAF2-204ENST00000467560 GFRA4Q9GZZ7 299 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms