RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 NEGR1Q7Z3B1 354 aa14.9□□□□□ -0.02
CCDC78-207ENST00000466708 UFSP1Q6NVU6 142 aa14.89□□□□□ -0.03
CCDC78-207ENST00000466708 STPG4Q8N801 248 aa14.89□□□□□ -0.03
CCDC78-207ENST00000466708 NSD1Q96L73 2696 aaPredicted RBP14.89□□□□□ -0.03
CCDC78-207ENST00000466708 RHODO00212 210 aa14.89□□□□□ -0.03
CCDC78-207ENST00000466708 RIPPLY3P57055 190 aa14.89□□□□□ -0.03
CCDC78-207ENST00000466708 LURAP1LQ8IV03 231 aa14.89□□□□□ -0.03
CCDC78-207ENST00000466708 HHLA3Q9XRX5 114 aa14.89□□□□□ -0.03
CCDC78-207ENST00000466708 A0A1B0GV90 55 aa14.88□□□□□ -0.03
CCDC78-207ENST00000466708 PLNP26678 52 aa14.87□□□□□ -0.03
CCDC78-207ENST00000466708 RHOHQ15669 191 aa14.87□□□□□ -0.03
CCDC78-207ENST00000466708 CFAP126Q5VTH2 177 aa14.87□□□□□ -0.03
CCDC78-207ENST00000466708 NEXN-AS1Q8NBZ9 246 aa14.87□□□□□ -0.03
CCDC78-207ENST00000466708 MRPL35Q9NZE8 188 aaKnown RBP14.87□□□□□ -0.03
CCDC78-207ENST00000466708 BATFQ16520 125 aa14.87□□□□□ -0.03
CCDC78-207ENST00000466708 C1QTNF4Q9BXJ3 329 aa14.87□□□□□ -0.03
CCDC78-207ENST00000466708 I3L3M4 83 aa14.86□□□□□ -0.03
CCDC78-207ENST00000466708 TP53TG1Q9Y2A0 90 aa14.86□□□□□ -0.03
CCDC78-207ENST00000466708 IGHV3OR16-12A0A075B7B8 117 aa14.85□□□□□ -0.03
CCDC78-207ENST00000466708 F8VRH5 84 aa14.85□□□□□ -0.03
CCDC78-207ENST00000466708 DLEU1O43261 78 aa14.85□□□□□ -0.03
CCDC78-207ENST00000466708 AZU1P20160 251 aa14.85□□□□□ -0.03
CCDC78-207ENST00000466708 INSL3P51460 131 aa14.85□□□□□ -0.03
CCDC78-207ENST00000466708 COL5A1-AS1Q5SY13 56 aa14.85□□□□□ -0.03
CCDC78-207ENST00000466708 IL17DQ8TAD2 202 aa14.85□□□□□ -0.03
CCDC78-207ENST00000466708 RS1O15537 224 aa14.85□□□□□ -0.03
CCDC78-207ENST00000466708 FGF6P10767 208 aa14.85□□□□□ -0.03
CCDC78-207ENST00000466708 BOD1L2Q8IYS8 172 aa14.85□□□□□ -0.03
CCDC78-207ENST00000466708 RNASE8Q8TDE3 154 aaKnown RBP14.85□□□□□ -0.03
CCDC78-207ENST00000466708 TMEM263Q8WUH6 116 aaKnown RBP14.85□□□□□ -0.03
CCDC78-207ENST00000466708 BAALCQ8WXS3 180 aa14.85□□□□□ -0.03
CCDC78-207ENST00000466708 TMEM141Q96I45 108 aa14.85□□□□□ -0.03
CCDC78-207ENST00000466708 FN1P02751 2386 aaKnown RBP14.84□□□□□ -0.03
CCDC78-207ENST00000466708 HIVEP1P15822 2718 aa14.84□□□□□ -0.03
CCDC78-207ENST00000466708 IGHV3-73A0A0B4J1V6 119 aa14.84□□□□□ -0.03
CCDC78-207ENST00000466708 TIMM17AQ99595 171 aa14.84□□□□□ -0.03
CCDC78-207ENST00000466708 MRPL16Q9NX20 251 aaKnown RBP14.84□□□□□ -0.03
CCDC78-207ENST00000466708 CHTOPQ9Y3Y2 248 aaKnown RBP14.84□□□□□ -0.03
CCDC78-207ENST00000466708 IGIPA6NJ69 53 aa14.83□□□□□ -0.04
CCDC78-207ENST00000466708 GIG44P09565 113 aaPredicted RBP14.83□□□□□ -0.04
CCDC78-207ENST00000466708 HINT1P49773 126 aaPredicted RBP14.83□□□□□ -0.04
CCDC78-207ENST00000466708 TP73-AS1Q9UF72 201 aa14.83□□□□□ -0.04
CCDC78-207ENST00000466708 C2CD3Q4AC94 2353 aa14.83□□□□□ -0.04
CCDC78-207ENST00000466708 ZC2HC1BQ5TFG8 222 aa14.82□□□□□ -0.04
CCDC78-207ENST00000466708 WFDC10AQ9H1F0 79 aa14.82□□□□□ -0.04
CCDC78-207ENST00000466708 NACAE9PAV3 2078 aa14.82□□□□□ -0.04
CCDC78-207ENST00000466708 TSHBP01222 138 aa14.82□□□□□ -0.04
CCDC78-207ENST00000466708 IGHV3-53P01767 116 aa14.82□□□□□ -0.04
CCDC78-207ENST00000466708 TNFRSF18Q9Y5U5 241 aa14.82□□□□□ -0.04
CCDC78-207ENST00000466708 SIVA1O15304 175 aa14.81□□□□□ -0.04
CCDC78-207ENST00000466708 NMUP48645 174 aa14.81□□□□□ -0.04
CCDC78-207ENST00000466708 C12orf54Q6X4T0 127 aa14.81□□□□□ -0.04
CCDC78-207ENST00000466708 DNAJC30Q96LL9 226 aa14.81□□□□□ -0.04
CCDC78-207ENST00000466708 PRSS29PA6NIE9 313 aa14.8□□□□□ -0.04
CCDC78-207ENST00000466708 RPL35AP18077 110 aaKnown RBP14.8□□□□□ -0.04
CCDC78-207ENST00000466708 C2orf91Q6ZV80 131 aa14.8□□□□□ -0.04
CCDC78-207ENST00000466708 RPL39P62891 51 aaKnown RBP14.8□□□□□ -0.04
CCDC78-207ENST00000466708 C9orf66Q5T8R8 295 aa14.8□□□□□ -0.04
CCDC78-207ENST00000466708 CITED1Q99966 193 aa14.79□□□□□ -0.04
CCDC78-207ENST00000466708 DAZ2Q13117 558 aaKnown RBP14.78□□□□□ -0.04
CCDC78-207ENST00000466708 PMVKQ15126 192 aa14.78□□□□□ -0.04
CCDC78-207ENST00000466708 MPV17L2Q567V2 206 aa14.78□□□□□ -0.04
CCDC78-207ENST00000466708 GTSCR1Q86UQ5 136 aa14.78□□□□□ -0.04
CCDC78-207ENST00000466708 C20orf203Q8NBC4 194 aa14.78□□□□□ -0.04
CCDC78-207ENST00000466708 CSNK1G2-AS1Q8NCQ2 148 aa14.78□□□□□ -0.04
CCDC78-207ENST00000466708 C16orf74Q96GX8 76 aa14.78□□□□□ -0.04
CCDC78-207ENST00000466708 NIPBLQ6KC79 2804 aaeCLIP14.78□□□□□ -0.04
CCDC78-207ENST00000466708 TRGV1A0A0A0MS02 117 aa14.78□□□□□ -0.04
CCDC78-207ENST00000466708 P0DMU3 169 aa14.78□□□□□ -0.04
CCDC78-207ENST00000466708 FAM231AP0DMU4 169 aa14.78□□□□□ -0.04
CCDC78-207ENST00000466708 FAM231CP0DMU5 169 aa14.78□□□□□ -0.04
CCDC78-207ENST00000466708 Q6ZSN1 163 aa14.78□□□□□ -0.04
CCDC78-207ENST00000466708 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.78□□□□□ -0.04
CCDC78-207ENST00000466708 DEFB104AQ8WTQ1 72 aa14.78□□□□□ -0.04
CCDC78-207ENST00000466708 TCTAP57738 103 aa14.77□□□□□ -0.05
CCDC78-207ENST00000466708 PAPPA-AS1Q5QFB9 102 aa14.77□□□□□ -0.05
CCDC78-207ENST00000466708 PCP2Q8IVA1 136 aa14.77□□□□□ -0.05
CCDC78-207ENST00000466708 OR4C5Q8NGB2 326 aa14.77□□□□□ -0.05
CCDC78-207ENST00000466708 IGKV2D-26A0A0A0MRZ7 120 aa14.76□□□□□ -0.05
CCDC78-207ENST00000466708 BVES-AS1Q5T3Y7 98 aa14.75□□□□□ -0.05
CCDC78-207ENST00000466708 CST9LQ9H4G1 147 aa14.75□□□□□ -0.05
CCDC78-207ENST00000466708 TRAV4A0A0B4J268 109 aa14.74□□□□□ -0.05
CCDC78-207ENST00000466708 RRN3P1Q2M238 152 aa14.74□□□□□ -0.05
CCDC78-207ENST00000466708 TMEM97Q5BJF2 176 aa14.74□□□□□ -0.05
CCDC78-207ENST00000466708 JMJD1CQ15652 2540 aa14.74□□□□□ -0.05
CCDC78-207ENST00000466708 Q6ZTI0 123 aa14.73□□□□□ -0.05
CCDC78-207ENST00000466708 NOP10Q9NPE3 64 aaKnown RBP14.73□□□□□ -0.05
CCDC78-207ENST00000466708 CIDEAO60543 219 aa14.72□□□□□ -0.05
CCDC78-207ENST00000466708 OVOL2Q9BRP0 275 aa14.72□□□□□ -0.05
CCDC78-207ENST00000466708 PYGO1Q9Y3Y4 419 aa14.72□□□□□ -0.05
CCDC78-207ENST00000466708 PLAC8L1A1L4L8 177 aa14.71□□□□□ -0.05
CCDC78-207ENST00000466708 HIGD1BQ9P298 99 aa14.71□□□□□ -0.05
CCDC78-207ENST00000466708 NPSP0C0P6 89 aa14.71□□□□□ -0.06
CCDC78-207ENST00000466708 ZNF479Q96JC4 524 aa14.71□□□□□ -0.06
CCDC78-207ENST00000466708 Q9UF83 564 aa14.71□□□□□ -0.06
CCDC78-207ENST00000466708 IGLV4-69A0A075B6H9 119 aa14.7□□□□□ -0.06
CCDC78-207ENST00000466708 TRBV10-1A0A0K0K1A3 114 aa14.7□□□□□ -0.06
CCDC78-207ENST00000466708 HSD52Q0P140 79 aa14.7□□□□□ -0.06
CCDC78-207ENST00000466708 CRYBA4P53673 196 aa14.69□□□□□ -0.06
CCDC78-207ENST00000466708 E9PLD3 99 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms