RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 MUC21A0A140T8X8 626 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 RAB19A4D1S5 217 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 C19orf71A6NCJ1 209 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 RBFOX3A6NFN3 312 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 IGLV2-8P01709 118 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 INAFM2P0DMQ5 153 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 GNG4P50150 75 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 SSTP61278 116 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 CACNG7P62955 275 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 MEF2BQ02080 365 aaPredicted RBP4.81□□□□□ -1.64
PTPRF-210ENST00000463041 CENPWQ5EE01 88 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 WDR73Q6P4I2 378 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 ATRAIDQ6UW56 229 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 OR2D3Q8NGH3 330 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 BAALCQ8WXS3 180 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 UBE2WQ96B02 151 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 DNAJC30Q96LL9 226 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 DERL1Q9BUN8 251 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 MED9Q9NWA0 146 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 VAX2Q9UIW0 290 aa4.81□□□□□ -1.64
PTPRF-210ENST00000463041 FLG2Q5D862 2391 aaPredicted RBP4.8□□□□□ -1.64
PTPRF-210ENST00000463041 H7C1H1 209 aa4.8□□□□□ -1.64
PTPRF-210ENST00000463041 P01737 135 aa4.8□□□□□ -1.64
PTPRF-210ENST00000463041 SMR3BP02814 79 aaPredicted RBP4.8□□□□□ -1.64
PTPRF-210ENST00000463041 IGLC6P0CF74 106 aa4.8□□□□□ -1.64
PTPRF-210ENST00000463041 WFDC2Q14508 124 aa4.8□□□□□ -1.64
PTPRF-210ENST00000463041 Q5VSD8 79 aa4.8□□□□□ -1.64
PTPRF-210ENST00000463041 FER1L6-AS1Q8NA97 138 aa4.8□□□□□ -1.64
PTPRF-210ENST00000463041 AP1S3Q96PC3 154 aa4.8□□□□□ -1.64
PTPRF-210ENST00000463041 FAM30AQ9NZY2 134 aa4.8□□□□□ -1.64
PTPRF-210ENST00000463041 M0QY20 66 aa4.79□□□□□ -1.64
PTPRF-210ENST00000463041 LECT2O14960 151 aa4.79□□□□□ -1.64
PTPRF-210ENST00000463041 TRGC1P0CF51 173 aa4.79□□□□□ -1.64
PTPRF-210ENST00000463041 GZMBP10144 247 aa4.79□□□□□ -1.64
PTPRF-210ENST00000463041 BCL2P10415 239 aa4.79□□□□□ -1.64
PTPRF-210ENST00000463041 C14orf177Q52M58 125 aa4.79□□□□□ -1.64
PTPRF-210ENST00000463041 ENHOQ6UWT2 76 aa4.79□□□□□ -1.64
PTPRF-210ENST00000463041 Q6ZNX1 250 aa4.79□□□□□ -1.64
PTPRF-210ENST00000463041 NTM-AS1Q6ZSK4 140 aa4.79□□□□□ -1.64
PTPRF-210ENST00000463041 C9orf62Q8N4C0 152 aa4.79□□□□□ -1.64
PTPRF-210ENST00000463041 CHCHD5Q9BSY4 110 aa4.79□□□□□ -1.64
PTPRF-210ENST00000463041 TPPP3Q9BW30 176 aa4.79□□□□□ -1.64
PTPRF-210ENST00000463041 C1orf43Q9BWL3 253 aa4.79□□□□□ -1.64
PTPRF-210ENST00000463041 HERC1Q15751 4861 aa4.79□□□□□ -1.64
PTPRF-210ENST00000463041 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.78□□□□□ -1.64
PTPRF-210ENST00000463041 TRBV25-1A0A075B6N4 114 aa4.78□□□□□ -1.64
PTPRF-210ENST00000463041 CRPP02741 224 aa4.78□□□□□ -1.64
PTPRF-210ENST00000463041 ANGP03950 147 aaKnown RBP4.78□□□□□ -1.64
PTPRF-210ENST00000463041 NTF3P20783 257 aa4.78□□□□□ -1.64
PTPRF-210ENST00000463041 BLOC1S1P78537 153 aa4.78□□□□□ -1.64
PTPRF-210ENST00000463041 MIAQ16674 131 aa4.78□□□□□ -1.64
PTPRF-210ENST00000463041 IQCJQ1A5X6 159 aa4.78□□□□□ -1.64
PTPRF-210ENST00000463041 MPV17L2Q567V2 206 aa4.78□□□□□ -1.64
PTPRF-210ENST00000463041 RASL11AQ6T310 242 aa4.78□□□□□ -1.64
PTPRF-210ENST00000463041 LYZL1Q6UWQ5 148 aa4.78□□□□□ -1.64
PTPRF-210ENST00000463041 Q6ZSA8 131 aa4.78□□□□□ -1.64
PTPRF-210ENST00000463041 C15orf54Q8N8G6 183 aa4.78□□□□□ -1.64
PTPRF-210ENST00000463041 NUDT10Q8NFP7 164 aa4.78□□□□□ -1.64
PTPRF-210ENST00000463041 NUDT11Q96G61 164 aa4.78□□□□□ -1.64
PTPRF-210ENST00000463041 NIT2Q9NQR4 276 aa4.78□□□□□ -1.64
PTPRF-210ENST00000463041 DMBT1Q9UGM3 2413 aaPredicted RBP4.78□□□□□ -1.64
PTPRF-210ENST00000463041 TRBV20OR9-2A0A075B6H5 130 aa4.77□□□□□ -1.65
PTPRF-210ENST00000463041 IGHV1-24A0A0C4DH33 117 aa4.77□□□□□ -1.65
PTPRF-210ENST00000463041 MGPP08493 103 aa4.77□□□□□ -1.65
PTPRF-210ENST00000463041 RBX1P62877 108 aa4.77□□□□□ -1.65
PTPRF-210ENST00000463041 SUMO4Q6EEV6 95 aa4.77□□□□□ -1.65
PTPRF-210ENST00000463041 OCC1Q8TAD7 63 aa4.77□□□□□ -1.65
PTPRF-210ENST00000463041 DPH3P1Q9H4G8 78 aa4.77□□□□□ -1.65
PTPRF-210ENST00000463041 PRR34Q9NV39 138 aa4.77□□□□□ -1.65
PTPRF-210ENST00000463041 MYCBP2O75592 4640 aa4.77□□□□□ -1.65
PTPRF-210ENST00000463041 A0A1B0GUV1 79 aa4.76□□□□□ -1.65
PTPRF-210ENST00000463041 TMEM250H0YL14 139 aa4.76□□□□□ -1.65
PTPRF-210ENST00000463041 PLA2G1BP04054 148 aaKnown RBP4.76□□□□□ -1.65
PTPRF-210ENST00000463041 HAMPP81172 84 aa4.76□□□□□ -1.65
PTPRF-210ENST00000463041 GAGE6Q13070 117 aa4.76□□□□□ -1.65
PTPRF-210ENST00000463041 TWIST1Q15672 202 aa4.76□□□□□ -1.65
PTPRF-210ENST00000463041 DGAT2L7PQ6IED9 249 aa4.76□□□□□ -1.65
PTPRF-210ENST00000463041 AKAP14Q86UN6 197 aa4.76□□□□□ -1.65
PTPRF-210ENST00000463041 LINC00269Q8N2A0 174 aa4.76□□□□□ -1.65
PTPRF-210ENST00000463041 LYPD6BQ8NI32 183 aa4.76□□□□□ -1.65
PTPRF-210ENST00000463041 PGLYRP4Q96LB8 373 aa4.76□□□□□ -1.65
PTPRF-210ENST00000463041 CNFNQ9BYD5 112 aa4.76□□□□□ -1.65
PTPRF-210ENST00000463041 RPP21Q9H633 154 aaKnown RBP4.76□□□□□ -1.65
PTPRF-210ENST00000463041 TRAV8-4A0A0B4J246 113 aa4.75□□□□□ -1.65
PTPRF-210ENST00000463041 NDUFS6O75380 124 aaKnown RBP4.75□□□□□ -1.65
PTPRF-210ENST00000463041 CTRLP40313 264 aa4.75□□□□□ -1.65
PTPRF-210ENST00000463041 NKX2-5P52952 324 aaPredicted RBP4.75□□□□□ -1.65
PTPRF-210ENST00000463041 SMIM15Q7Z3B0 74 aa4.75□□□□□ -1.65
PTPRF-210ENST00000463041 CLRN3Q8NCR9 226 aa4.75□□□□□ -1.65
PTPRF-210ENST00000463041 TMEM243Q9BU79 118 aa4.75□□□□□ -1.65
PTPRF-210ENST00000463041 CHAC1Q9BUX1 264 aa4.75□□□□□ -1.65
PTPRF-210ENST00000463041 RNASE7Q9H1E1 156 aaKnown RBP4.75□□□□□ -1.65
PTPRF-210ENST00000463041 A8MWL6 223 aa4.74□□□□□ -1.65
PTPRF-210ENST00000463041 USP17L23D6RBM5 183 aa4.74□□□□□ -1.65
PTPRF-210ENST00000463041 K7EN84 100 aa4.74□□□□□ -1.65
PTPRF-210ENST00000463041 GATCO43716 136 aaKnown RBP4.74□□□□□ -1.65
PTPRF-210ENST00000463041 FOXA3P55318 350 aaPredicted RBP4.74□□□□□ -1.65
PTPRF-210ENST00000463041 REG3AQ06141 175 aa4.74□□□□□ -1.65
PTPRF-210ENST00000463041 COTL1Q14019 142 aa4.74□□□□□ -1.65
PTPRF-210ENST00000463041 LINC01620Q4KN68 170 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms