RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 XCL1P47992 114 aa11.99□□□□□ -0.49
SMC4-204ENST00000462787 CNFNQ9BYD5 112 aa11.99□□□□□ -0.49
SMC4-204ENST00000462787 C14orf132Q9NPU4 83 aa11.99□□□□□ -0.49
SMC4-204ENST00000462787 TMEM256-PLSCR3K7ERE1 68 aa11.99□□□□□ -0.49
SMC4-204ENST00000462787 Q9HAA7 133 aa11.99□□□□□ -0.49
SMC4-204ENST00000462787 PLCE1Q9P212 2302 aa11.99□□□□□ -0.49
SMC4-204ENST00000462787 TNRC6BQ9UPQ9 1833 aaKnown RBP11.98□□□□□ -0.49
SMC4-204ENST00000462787 ZGRF1Q86YA3 2104 aa11.98□□□□□ -0.49
SMC4-204ENST00000462787 ATG2AQ2TAZ0 1938 aa11.98□□□□□ -0.49
SMC4-204ENST00000462787 MIR7-3HGQ8N6C7 128 aa11.98□□□□□ -0.49
SMC4-204ENST00000462787 SVIPQ8NHG7 77 aa11.98□□□□□ -0.49
SMC4-204ENST00000462787 DEFB1P60022 68 aa11.98□□□□□ -0.49
SMC4-204ENST00000462787 ZMAT4Q9H898 229 aa11.97□□□□□ -0.49
SMC4-204ENST00000462787 CACNA1BQ00975 2339 aa11.97□□□□□ -0.49
SMC4-204ENST00000462787 PCNX1Q96RV3 2341 aa11.97□□□□□ -0.49
SMC4-204ENST00000462787 K7ENP7 123 aa11.97□□□□□ -0.49
SMC4-204ENST00000462787 ATP5EP2Q5VTU8 51 aa11.97□□□□□ -0.49
SMC4-204ENST00000462787 CCDC140Q96MF4 163 aa11.97□□□□□ -0.49
SMC4-204ENST00000462787 GPHB5Q86YW7 130 aa11.97□□□□□ -0.49
SMC4-204ENST00000462787 NOP10Q9NPE3 64 aaKnown RBP11.97□□□□□ -0.49
SMC4-204ENST00000462787 IGLV4-3A0A075B6K6 122 aa11.96□□□□□ -0.49
SMC4-204ENST00000462787 NKAPP1Q8N9T2 125 aa11.96□□□□□ -0.49
SMC4-204ENST00000462787 CITED2Q99967 270 aaPredicted RBP11.96□□□□□ -0.49
SMC4-204ENST00000462787 J3QLI3 93 aa11.96□□□□□ -0.49
SMC4-204ENST00000462787 SMAD5-AS1Q9Y6J3 95 aa11.96□□□□□ -0.49
SMC4-204ENST00000462787 IGHV4-4A0A075B6R2 117 aa11.96□□□□□ -0.5
SMC4-204ENST00000462787 LY6DQ14210 128 aa11.96□□□□□ -0.5
SMC4-204ENST00000462787 ODF3Q96PU9 254 aa11.96□□□□□ -0.5
SMC4-204ENST00000462787 NOTCH3Q9UM47 2321 aa11.96□□□□□ -0.5
SMC4-204ENST00000462787 A0A0J9YX75 114 aa11.95□□□□□ -0.5
SMC4-204ENST00000462787 PDE6GP18545 87 aa11.95□□□□□ -0.5
SMC4-204ENST00000462787 ANGP03950 147 aaKnown RBP11.95□□□□□ -0.5
SMC4-204ENST00000462787 SDIM1Q6ZPB5 146 aa11.95□□□□□ -0.5
SMC4-204ENST00000462787 LRRC75A-AS1Q8N1F1 130 aa11.95□□□□□ -0.5
SMC4-204ENST00000462787 ABCA4P78363 2273 aa11.95□□□□□ -0.5
SMC4-204ENST00000462787 LST1O00453 97 aa11.95□□□□□ -0.5
SMC4-204ENST00000462787 PCNX2A6NKB5 2137 aa11.95□□□□□ -0.5
SMC4-204ENST00000462787 UNQ9165/PRO28630Q6UXU0 137 aa11.95□□□□□ -0.5
SMC4-204ENST00000462787 FAM240AA0A1B0GVK7 77 aa11.94□□□□□ -0.5
SMC4-204ENST00000462787 ODF3BA8MYP8 253 aa11.94□□□□□ -0.5
SMC4-204ENST00000462787 TIMM17BO60830 172 aa11.94□□□□□ -0.5
SMC4-204ENST00000462787 LTBP2Q14767 1821 aa11.94□□□□□ -0.5
SMC4-204ENST00000462787 TRBV6-5A0A0K0K1A5 114 aa11.94□□□□□ -0.5
SMC4-204ENST00000462787 TRBV27A0A0K0K1C4 114 aa11.94□□□□□ -0.5
SMC4-204ENST00000462787 CEMP1Q6PRD7 247 aaPredicted RBP11.94□□□□□ -0.5
SMC4-204ENST00000462787 TMEM263Q8WUH6 116 aaKnown RBP11.94□□□□□ -0.5
SMC4-204ENST00000462787 FAM236DA0A1B0GTK5 79 aa11.94□□□□□ -0.5
SMC4-204ENST00000462787 FAM236CP0DP71 79 aa11.94□□□□□ -0.5
SMC4-204ENST00000462787 UBE2D1P51668 147 aa11.94□□□□□ -0.5
SMC4-204ENST00000462787 LINC00308Q8TCZ7 52 aa11.94□□□□□ -0.5
SMC4-204ENST00000462787 COX7CP15954 63 aa11.93□□□□□ -0.5
SMC4-204ENST00000462787 GNLYP22749 145 aa11.93□□□□□ -0.5
SMC4-204ENST00000462787 MUC22E2RYF6 1773 aaPredicted RBP11.93□□□□□ -0.5
SMC4-204ENST00000462787 DAD1P61803 113 aa11.93□□□□□ -0.5
SMC4-204ENST00000462787 ZFAND3Q9H8U3 227 aa11.93□□□□□ -0.5
SMC4-204ENST00000462787 C2orf16Q68DN1 1984 aa11.93□□□□□ -0.5
SMC4-204ENST00000462787 MED13LQ71F56 2210 aa11.93□□□□□ -0.5
SMC4-204ENST00000462787 ZFAND2AQ8N6M9 145 aa11.93□□□□□ -0.5
SMC4-204ENST00000462787 SERP2Q8N6R1 65 aa11.93□□□□□ -0.5
SMC4-204ENST00000462787 TRAV23DV6A0A075B6W5 121 aa11.92□□□□□ -0.5
SMC4-204ENST00000462787 NDUFA1O15239 70 aa11.92□□□□□ -0.5
SMC4-204ENST00000462787 PIP4P1Q86T03 277 aa11.92□□□□□ -0.5
SMC4-204ENST00000462787 DSCAML1Q8TD84 2053 aa11.92□□□□□ -0.5
SMC4-204ENST00000462787 CDK2AP2O75956 126 aa11.92□□□□□ -0.5
SMC4-204ENST00000462787 UBE2D3P61077 147 aa11.92□□□□□ -0.5
SMC4-204ENST00000462787 UBE2D2P62837 147 aa11.92□□□□□ -0.5
SMC4-204ENST00000462787 CLPSL2Q6UWE3 100 aa11.92□□□□□ -0.5
SMC4-204ENST00000462787 C20orf197Q8N268 126 aa11.92□□□□□ -0.5
SMC4-204ENST00000462787 BLCAPP62952 87 aa11.91□□□□□ -0.5
SMC4-204ENST00000462787 IGHV4OR15-8A0A075B7B6 117 aa11.91□□□□□ -0.5
SMC4-204ENST00000462787 A0A087WW49 117 aa11.91□□□□□ -0.5
SMC4-204ENST00000462787 GAS8-AS1O95177 125 aa11.91□□□□□ -0.5
SMC4-204ENST00000462787 CXCL5P42830 114 aa11.91□□□□□ -0.5
SMC4-204ENST00000462787 SIRPDQ9H106 197 aa11.91□□□□□ -0.5
SMC4-204ENST00000462787 PYGO1Q9Y3Y4 419 aa11.91□□□□□ -0.5
SMC4-204ENST00000462787 PCDH15Q96QU1 1955 aa11.91□□□□□ -0.5
SMC4-204ENST00000462787 A0A096LNJ9 63 aa11.91□□□□□ -0.5
SMC4-204ENST00000462787 TRBV10-1A0A0K0K1A3 114 aa11.91□□□□□ -0.5
SMC4-204ENST00000462787 UPK3BQ9BT76 320 aa11.91□□□□□ -0.5
SMC4-204ENST00000462787 F5H768 121 aa11.91□□□□□ -0.5
SMC4-204ENST00000462787 Q6ZS46 218 aa11.91□□□□□ -0.5
SMC4-204ENST00000462787 DYSFO75923 2080 aa11.9□□□□□ -0.5
SMC4-204ENST00000462787 HCFC1P51610 2035 aa11.9□□□□□ -0.5
SMC4-204ENST00000462787 LY6LH3BQJ8 138 aa11.9□□□□□ -0.5
SMC4-204ENST00000462787 M0QY20 66 aa11.9□□□□□ -0.5
SMC4-204ENST00000462787 FSTL3O95633 263 aa11.9□□□□□ -0.5
SMC4-204ENST00000462787 FUSP35637 526 aaKnown RBP eCLIP11.9□□□□□ -0.5
SMC4-204ENST00000462787 RPL18AQ02543 176 aaKnown RBP11.9□□□□□ -0.5
SMC4-204ENST00000462787 C16orf74Q96GX8 76 aa11.9□□□□□ -0.5
SMC4-204ENST00000462787 CDKN2A-AS1Q9UH64 79 aa11.9□□□□□ -0.5
SMC4-204ENST00000462787 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.9□□□□□ -0.517e-7■■■■■ 37.4
SMC4-204ENST00000462787 TMEM89A2RUT3 159 aa11.89□□□□□ -0.51
SMC4-204ENST00000462787 TIRAPP58753 221 aa11.89□□□□□ -0.51
SMC4-204ENST00000462787 NREPQ16612 68 aa11.89□□□□□ -0.51
SMC4-204ENST00000462787 A0A1W2PNU3 283 aaPredicted RBP11.89□□□□□ -0.51
SMC4-204ENST00000462787 H7C423 109 aa11.89□□□□□ -0.51
SMC4-204ENST00000462787 COL6A6A6NMZ7 2263 aa11.89□□□□□ -0.51
SMC4-204ENST00000462787 IGF1P05019 195 aa11.89□□□□□ -0.51
SMC4-204ENST00000462787 GRNP28799 593 aaKnown RBP11.89□□□□□ -0.51
SMC4-204ENST00000462787 IGF2-ASQ6U949 168 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms