RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 PHLDA1Q8WV24 401 aaPredicted RBP5.28□□□□□ -1.56
UBE4B-204ENST00000462658 C20orf144Q9BQM9 153 aa5.28□□□□□ -1.56
UBE4B-204ENST00000462658 XCL2Q9UBD3 114 aa5.28□□□□□ -1.56
UBE4B-204ENST00000462658 TIMM8BQ9Y5J9 83 aaPredicted RBP5.28□□□□□ -1.56
UBE4B-204ENST00000462658 AGRNO00468 2067 aa5.28□□□□□ -1.56
UBE4B-204ENST00000462658 H3BVH4 76 aa5.27□□□□□ -1.57
UBE4B-204ENST00000462658 GAS8-AS1O95177 125 aa5.27□□□□□ -1.57
UBE4B-204ENST00000462658 APCSP02743 223 aa5.27□□□□□ -1.57
UBE4B-204ENST00000462658 TRGC1P0CF51 173 aa5.27□□□□□ -1.57
UBE4B-204ENST00000462658 CACNG7P62955 275 aa5.27□□□□□ -1.57
UBE4B-204ENST00000462658 SPANXN1Q5VSR9 72 aa5.27□□□□□ -1.57
UBE4B-204ENST00000462658 MORN3Q6PF18 240 aaPredicted RBP5.27□□□□□ -1.57
UBE4B-204ENST00000462658 OR10AG1Q8NH19 301 aa5.27□□□□□ -1.57
UBE4B-204ENST00000462658 LINC01587Q99440 93 aa5.27□□□□□ -1.57
UBE4B-204ENST00000462658 CNFNQ9BYD5 112 aa5.27□□□□□ -1.57
UBE4B-204ENST00000462658 TP53TG3Q9ULZ0 132 aa5.27□□□□□ -1.57
UBE4B-204ENST00000462658 IGHV4-4A0A075B6R2 117 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 A0A087X002 238 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 IGHV3-16A0A0C4DH30 117 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 HIST1H2BKO60814 126 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 HIST1H2BJP06899 126 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 GIG44P09565 113 aaPredicted RBP5.26□□□□□ -1.57
UBE4B-204ENST00000462658 RNASE3P12724 160 aaKnown RBP5.26□□□□□ -1.57
UBE4B-204ENST00000462658 HTN1P15515 57 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 HIST1H2BOP23527 126 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 HIST1H2BBP33778 126 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 HIST1H2BDP58876 126 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 HIST1H2BCP62807 126 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 SLAQ13239 276 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 HIST2H2BEQ16778 126 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.26□□□□□ -1.57
UBE4B-204ENST00000462658 ZNF493Q6ZR52 646 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 C1orf158Q8N1D5 194 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 GATD1Q8NB37 220 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 HIST1H2BHQ93079 126 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 HIST1H2BNQ99877 126 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 HIST1H2BMQ99879 126 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 LINC00467Q9BRT7 94 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 TMEM208Q9BTX3 173 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 PYGO1Q9Y3Y4 419 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 PHLDA3Q9Y5J5 127 aa5.26□□□□□ -1.57
UBE4B-204ENST00000462658 NOTCH3Q9UM47 2321 aa5.25□□□□□ -1.57
UBE4B-204ENST00000462658 IGHV3OR16-12A0A075B7B8 117 aa5.25□□□□□ -1.57
UBE4B-204ENST00000462658 M0R381 172 aa5.25□□□□□ -1.57
UBE4B-204ENST00000462658 NDUFA6P56556 154 aa5.25□□□□□ -1.57
UBE4B-204ENST00000462658 TMEM256Q8N2U0 113 aa5.25□□□□□ -1.57
UBE4B-204ENST00000462658 C9orf85Q96MD7 179 aa5.25□□□□□ -1.57
UBE4B-204ENST00000462658 TMEM191AQ9H0A3 160 aa5.25□□□□□ -1.57
UBE4B-204ENST00000462658 GOLT1BQ9Y3E0 138 aa5.25□□□□□ -1.57
UBE4B-204ENST00000462658 LOC102724200A0A096LPH7 203 aaPredicted RBP5.24□□□□□ -1.57
UBE4B-204ENST00000462658 PRM2P04554 102 aa5.24□□□□□ -1.57
UBE4B-204ENST00000462658 EGFEM1PQ0D2K5 195 aa5.24□□□□□ -1.57
UBE4B-204ENST00000462658 FAM104BQ5XKR9 115 aa5.24□□□□□ -1.57
UBE4B-204ENST00000462658 SMIM15Q7Z3B0 74 aa5.24□□□□□ -1.57
UBE4B-204ENST00000462658 AMN1Q8IY45 258 aa5.24□□□□□ -1.57
UBE4B-204ENST00000462658 CSNK1G2-AS1Q8NCQ2 148 aa5.24□□□□□ -1.57
UBE4B-204ENST00000462658 DYNC2H1Q8NCM8 4307 aaKnown RBP5.24□□□□□ -1.57
UBE4B-204ENST00000462658 KIR2DL5BA0A0G2JN68 375 aa5.23□□□□□ -1.57
UBE4B-204ENST00000462658 KIR2DL5BA0A0G2JPC4 375 aa5.23□□□□□ -1.57
UBE4B-204ENST00000462658 G3V4G9 280 aa5.23□□□□□ -1.57
UBE4B-204ENST00000462658 NXPH4O95158 308 aa5.23□□□□□ -1.57
UBE4B-204ENST00000462658 AZU1P20160 251 aa5.23□□□□□ -1.57
UBE4B-204ENST00000462658 RAB4AP20338 218 aa5.23□□□□□ -1.57
UBE4B-204ENST00000462658 EVI2AP22794 236 aa5.23□□□□□ -1.57
UBE4B-204ENST00000462658 SRIP30626 198 aa5.23□□□□□ -1.57
UBE4B-204ENST00000462658 KIR2DL5AQ8N109 375 aa5.23□□□□□ -1.57
UBE4B-204ENST00000462658 KIR2DL5BQ8NHK3 375 aa5.23□□□□□ -1.57
UBE4B-204ENST00000462658 RNF185Q96GF1 192 aa5.23□□□□□ -1.57
UBE4B-204ENST00000462658 RCHY1Q96PM5 261 aa5.23□□□□□ -1.57
UBE4B-204ENST00000462658 ALKBH7Q9BT30 221 aaPredicted RBP5.23□□□□□ -1.57
UBE4B-204ENST00000462658 GSN-AS1Q9NRJ2 163 aa5.23□□□□□ -1.57
UBE4B-204ENST00000462658 C5orf52A6NGY3 159 aa5.22□□□□□ -1.57
UBE4B-204ENST00000462658 M0R2P5 195 aa5.22□□□□□ -1.57
UBE4B-204ENST00000462658 APOC4P55056 127 aa5.22□□□□□ -1.57
UBE4B-204ENST00000462658 Q0VG73 95 aa5.22□□□□□ -1.57
UBE4B-204ENST00000462658 MRPL51Q4U2R6 128 aaKnown RBP5.22□□□□□ -1.57
UBE4B-204ENST00000462658 C14orf177Q52M58 125 aa5.22□□□□□ -1.57
UBE4B-204ENST00000462658 ZNF705AQ6ZN79 300 aaPredicted RBP5.22□□□□□ -1.57
UBE4B-204ENST00000462658 C14orf178Q8N769 122 aaPredicted RBP5.22□□□□□ -1.57
UBE4B-204ENST00000462658 C11orf72Q8NBR9 251 aa5.22□□□□□ -1.57
UBE4B-204ENST00000462658 AP1S3Q96PC3 154 aa5.22□□□□□ -1.57
UBE4B-204ENST00000462658 SPXQ9BT56 116 aa5.22□□□□□ -1.57
UBE4B-204ENST00000462658 DPH3P1Q9H4G8 78 aa5.22□□□□□ -1.57
UBE4B-204ENST00000462658 D6R8Y8 96 aa5.21□□□□□ -1.58
UBE4B-204ENST00000462658 SMKR1H3BMG3 65 aa5.21□□□□□ -1.58
UBE4B-204ENST00000462658 SMIM17P0DL12 118 aa5.21□□□□□ -1.58
UBE4B-204ENST00000462658 CKS2P33552 79 aa5.21□□□□□ -1.58
UBE4B-204ENST00000462658 RRN3P1Q2M238 152 aa5.21□□□□□ -1.58
UBE4B-204ENST00000462658 OR10J3Q5JRS4 329 aa5.21□□□□□ -1.58
UBE4B-204ENST00000462658 ADAMTSL4-AS1Q5T5F5 129 aa5.21□□□□□ -1.58
UBE4B-204ENST00000462658 BAGE3Q86Y29 109 aa5.21□□□□□ -1.58
UBE4B-204ENST00000462658 ORMDL3Q8N138 153 aa5.21□□□□□ -1.58
UBE4B-204ENST00000462658 RNASE8Q8TDE3 154 aaKnown RBP5.21□□□□□ -1.58
UBE4B-204ENST00000462658 TMEM263Q8WUH6 116 aaKnown RBP5.21□□□□□ -1.58
UBE4B-204ENST00000462658 PTH2Q96A98 100 aa5.21□□□□□ -1.58
UBE4B-204ENST00000462658 Q9H8V8 135 aa5.21□□□□□ -1.58
UBE4B-204ENST00000462658 JPT2Q9H910 190 aa5.21□□□□□ -1.58
UBE4B-204ENST00000462658 U3KQK5 164 aa5.21□□□□□ -1.58
UBE4B-204ENST00000462658 TGP01266 2768 aa5.21□□□□□ -1.58
UBE4B-204ENST00000462658 PPBPP02775 128 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms