RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 FSHBP01225 129 aa12.48□□□□□ -0.41
ACTB-207ENST00000462494 KHDC1LQ5JSQ8 128 aa12.47□□□□□ -0.41
ACTB-207ENST00000462494 A0A1B0GWB2 263 aa12.47□□□□□ -0.41
ACTB-207ENST00000462494 PRM2P04554 102 aa12.47□□□□□ -0.41
ACTB-207ENST00000462494 P0DMU3 169 aa12.46□□□□□ -0.41
ACTB-207ENST00000462494 FAM231AP0DMU4 169 aa12.46□□□□□ -0.41
ACTB-207ENST00000462494 FAM231CP0DMU5 169 aa12.46□□□□□ -0.41
ACTB-207ENST00000462494 TSPEAR-AS2P59090 65 aa12.46□□□□□ -0.41
ACTB-207ENST00000462494 RHOHQ15669 191 aa12.46□□□□□ -0.41
ACTB-207ENST00000462494 NSUN5P1Q3KNT7 163 aa12.46□□□□□ -0.41
ACTB-207ENST00000462494 HIST2H2BDQ6DRA6 164 aa12.46□□□□□ -0.41
ACTB-207ENST00000462494 PTPN13Q12923 2485 aa12.46□□□□□ -0.41
ACTB-207ENST00000462494 TEX15Q9BXT5 2789 aa12.46□□□□□ -0.42
ACTB-207ENST00000462494 TMEM238LA0A1B0GVL6 79 aa12.46□□□□□ -0.42
ACTB-207ENST00000462494 A6NJY4 79 aa12.46□□□□□ -0.42
ACTB-207ENST00000462494 I3L3M4 83 aa12.46□□□□□ -0.42
ACTB-207ENST00000462494 MRPL16Q9NX20 251 aaKnown RBP12.46□□□□□ -0.42
ACTB-207ENST00000462494 PGPEP1Q9NXJ5 209 aa12.46□□□□□ -0.42
ACTB-207ENST00000462494 MTURNQ8N3F0 131 aa12.45□□□□□ -0.42
ACTB-207ENST00000462494 RNF152Q8N8N0 203 aa12.45□□□□□ -0.42
ACTB-207ENST00000462494 BBC3Q96PG8 261 aaPredicted RBP12.45□□□□□ -0.42
ACTB-207ENST00000462494 ABCA12Q86UK0 2595 aa12.45□□□□□ -0.42
ACTB-207ENST00000462494 CR1P17927 2039 aa12.45□□□□□ -0.42
ACTB-207ENST00000462494 TEX48A0A1B0GUV7 120 aa12.45□□□□□ -0.42
ACTB-207ENST00000462494 WFDC2Q14508 124 aa12.45□□□□□ -0.42
ACTB-207ENST00000462494 Q5PR19 223 aa12.45□□□□□ -0.42
ACTB-207ENST00000462494 A0A0J9YY99 117 aa12.44□□□□□ -0.42
ACTB-207ENST00000462494 PROK1P58294 105 aa12.44□□□□□ -0.42
ACTB-207ENST00000462494 C20orf203Q8NBC4 194 aa12.44□□□□□ -0.42
ACTB-207ENST00000462494 APOMO95445 188 aa12.43□□□□□ -0.42
ACTB-207ENST00000462494 NAV2Q8IVL1 2488 aa12.43□□□□□ -0.42
ACTB-207ENST00000462494 F8W1H4 67 aa12.43□□□□□ -0.42
ACTB-207ENST00000462494 H3BMM0 161 aa12.43□□□□□ -0.42
ACTB-207ENST00000462494 SFTA2Q6UW10 78 aa12.43□□□□□ -0.42
ACTB-207ENST00000462494 TMEM61Q8N0U2 210 aa12.43□□□□□ -0.42
ACTB-207ENST00000462494 USP24Q9UPU5 2620 aa12.43□□□□□ -0.42
ACTB-207ENST00000462494 IGHV3-64A0A075B6Q5 118 aa12.42□□□□□ -0.42
ACTB-207ENST00000462494 J3QQQ9 107 aa12.42□□□□□ -0.42
ACTB-207ENST00000462494 LGALS3P17931 250 aaKnown RBP12.42□□□□□ -0.42
ACTB-207ENST00000462494 RBMY1BA6NDE4 496 aaKnown RBP12.42□□□□□ -0.42
ACTB-207ENST00000462494 RBMY1EA6NEQ0 496 aaKnown RBP12.42□□□□□ -0.42
ACTB-207ENST00000462494 RBMY1DP0C7P1 496 aaKnown RBP12.42□□□□□ -0.42
ACTB-207ENST00000462494 DEFB113Q30KQ7 82 aa12.42□□□□□ -0.42
ACTB-207ENST00000462494 Q96MF0 132 aa12.42□□□□□ -0.42
ACTB-207ENST00000462494 GAGE13Q4V321 117 aa12.41□□□□□ -0.42
ACTB-207ENST00000462494 VCX2Q9H322 139 aa12.41□□□□□ -0.42
ACTB-207ENST00000462494 PEMTQ9UBM1 199 aa12.41□□□□□ -0.42
ACTB-207ENST00000462494 COTL1Q14019 142 aa12.41□□□□□ -0.42
ACTB-207ENST00000462494 NFE4Q86UQ8 179 aa12.41□□□□□ -0.42
ACTB-207ENST00000462494 DYNLRB2Q8TF09 96 aa12.41□□□□□ -0.42
ACTB-207ENST00000462494 ZNF469Q96JG9 3925 aaPredicted RBP12.4□□□□□ -0.42
ACTB-207ENST00000462494 MYO9AB2RTY4 2548 aa12.4□□□□□ -0.42
ACTB-207ENST00000462494 UBE2D1P51668 147 aa12.4□□□□□ -0.42
ACTB-207ENST00000462494 IGLV4-3A0A075B6K6 122 aa12.39□□□□□ -0.43
ACTB-207ENST00000462494 LOC107984156A0A0G2JMH3 177 aa12.39□□□□□ -0.43
ACTB-207ENST00000462494 SH2D6Q7Z4S9 175 aa12.39□□□□□ -0.43
ACTB-207ENST00000462494 ARL17AQ8IVW1 177 aa12.39□□□□□ -0.43
ACTB-207ENST00000462494 DLX4Q92988 240 aaPredicted RBP12.39□□□□□ -0.43
ACTB-207ENST00000462494 A0A0J9YXV3 536 aa12.39□□□□□ -0.43
ACTB-207ENST00000462494 TNFRSF18Q9Y5U5 241 aa12.39□□□□□ -0.43
ACTB-207ENST00000462494 UBR5O95071 2799 aaPredicted RBP12.39□□□□□ -0.43
ACTB-207ENST00000462494 TMEM223A0PJW6 202 aa12.38□□□□□ -0.43
ACTB-207ENST00000462494 M0R2P5 195 aa12.38□□□□□ -0.43
ACTB-207ENST00000462494 TSPAN13O95857 204 aa12.38□□□□□ -0.43
ACTB-207ENST00000462494 ETDBQ3ZM63 59 aa12.38□□□□□ -0.43
ACTB-207ENST00000462494 Q8N2B8 174 aa12.38□□□□□ -0.43
ACTB-207ENST00000462494 SLC25A29Q8N8R3 303 aa12.38□□□□□ -0.43
ACTB-207ENST00000462494 C4orf3Q8WVX3 66 aa12.38□□□□□ -0.43
ACTB-207ENST00000462494 SPANXB1Q9NS25 103 aaPredicted RBP12.38□□□□□ -0.43
ACTB-207ENST00000462494 IGHV3-30P01768 117 aa12.38□□□□□ -0.43
ACTB-207ENST00000462494 IGHV3-30-5P0DP03 117 aa12.38□□□□□ -0.43
ACTB-207ENST00000462494 ZNF843Q8N446 348 aa12.38□□□□□ -0.43
ACTB-207ENST00000462494 AMELXQ99217 191 aa12.38□□□□□ -0.43
ACTB-207ENST00000462494 LINC01587Q99440 93 aa12.38□□□□□ -0.43
ACTB-207ENST00000462494 SPAG8Q99932 426 aaPredicted RBP12.38□□□□□ -0.43
ACTB-207ENST00000462494 MAP6D1Q9H9H5 199 aa12.38□□□□□ -0.43
ACTB-207ENST00000462494 Q9UF83 564 aa12.38□□□□□ -0.43
ACTB-207ENST00000462494 RHODO00212 210 aa12.37□□□□□ -0.43
ACTB-207ENST00000462494 LEPROTO15243 131 aa12.37□□□□□ -0.43
ACTB-207ENST00000462494 CD28P10747 220 aa12.37□□□□□ -0.43
ACTB-207ENST00000462494 ZNF22P17026 224 aaPredicted RBP12.37□□□□□ -0.43
ACTB-207ENST00000462494 ZNF415Q09FC8 603 aa12.37□□□□□ -0.43
ACTB-207ENST00000462494 CEMP1Q6PRD7 247 aaPredicted RBP12.37□□□□□ -0.43
ACTB-207ENST00000462494 A8MWV9 139 aa12.37□□□□□ -0.43
ACTB-207ENST00000462494 NDUFA11Q86Y39 141 aa12.37□□□□□ -0.43
ACTB-207ENST00000462494 PRRC2AP48634 2157 aaKnown RBP12.36□□□□□ -0.43
ACTB-207ENST00000462494 PSMB2P49721 201 aa12.36□□□□□ -0.43
ACTB-207ENST00000462494 RNASE13Q5GAN3 156 aaKnown RBP12.36□□□□□ -0.43
ACTB-207ENST00000462494 Q6ZSN1 163 aa12.36□□□□□ -0.43
ACTB-207ENST00000462494 TLN2Q9Y4G6 2542 aa12.36□□□□□ -0.43
ACTB-207ENST00000462494 AKAP9Q99996 3911 aa12.36□□□□□ -0.43
ACTB-207ENST00000462494 A8MTW9 85 aa12.35□□□□□ -0.43
ACTB-207ENST00000462494 RAX2Q96IS3 184 aa12.35□□□□□ -0.43
ACTB-207ENST00000462494 PRO0461Q9UI25 63 aa12.35□□□□□ -0.43
ACTB-207ENST00000462494 CFC1BP0CG36 223 aa12.35□□□□□ -0.43
ACTB-207ENST00000462494 CFC1P0CG37 223 aa12.35□□□□□ -0.43
ACTB-207ENST00000462494 SPXQ9BT56 116 aa12.35□□□□□ -0.43
ACTB-207ENST00000462494 DEFB114Q30KQ6 69 aa12.34□□□□□ -0.43
ACTB-207ENST00000462494 C11orf44Q8N8P7 122 aa12.34□□□□□ -0.43
ACTB-207ENST00000462494 TRAV2A0A0B4J234 112 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms