RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 UQCC3Q6UW78 93 aa3.93□□□□□ -1.78
VPS36-202ENST00000462289 ZFP82Q8N141 532 aa3.93□□□□□ -1.78
VPS36-202ENST00000462289 SLC25A29Q8N8R3 303 aa3.93□□□□□ -1.78
VPS36-202ENST00000462289 SAMD10Q9BYL1 202 aa3.93□□□□□ -1.78
VPS36-202ENST00000462289 EIF5A2Q9GZV4 153 aaKnown RBP3.93□□□□□ -1.78
VPS36-202ENST00000462289 RNASE7Q9H1E1 156 aaKnown RBP3.93□□□□□ -1.78
VPS36-202ENST00000462289 RPP21Q9H633 154 aaKnown RBP3.93□□□□□ -1.78
VPS36-202ENST00000462289 JPT2Q9H910 190 aa3.93□□□□□ -1.78
VPS36-202ENST00000462289 HHLA3Q9XRX5 114 aa3.93□□□□□ -1.78
VPS36-202ENST00000462289 PKD1P98161 4303 aa3.93□□□□□ -1.78
VPS36-202ENST00000462289 TRBV10-1A0A0K0K1A3 114 aa3.92□□□□□ -1.78
VPS36-202ENST00000462289 GRIFINA4D1Z8 144 aa3.92□□□□□ -1.78
VPS36-202ENST00000462289 ZNF727A8MUV8 499 aa3.92□□□□□ -1.78
VPS36-202ENST00000462289 K7EQD1 137 aa3.92□□□□□ -1.78
VPS36-202ENST00000462289 ADCYAP1P18509 176 aa3.92□□□□□ -1.78
VPS36-202ENST00000462289 BTF3P20290 206 aaKnown RBP3.92□□□□□ -1.78
VPS36-202ENST00000462289 ESRGQ1W209 222 aa3.92□□□□□ -1.78
VPS36-202ENST00000462289 TMEM241Q24JQ0 296 aa3.92□□□□□ -1.78
VPS36-202ENST00000462289 FER1L6-AS1Q8NA97 138 aa3.92□□□□□ -1.78
VPS36-202ENST00000462289 OR4C5Q8NGB2 326 aa3.92□□□□□ -1.78
VPS36-202ENST00000462289 OR2D3Q8NGH3 330 aa3.92□□□□□ -1.78
VPS36-202ENST00000462289 TSKUQ8WUA8 353 aa3.92□□□□□ -1.78
VPS36-202ENST00000462289 Q9UF83 564 aa3.92□□□□□ -1.78
VPS36-202ENST00000462289 NAT8Q9UHE5 227 aa3.92□□□□□ -1.78
VPS36-202ENST00000462289 MRPS16Q9Y3D3 137 aaKnown RBP3.92□□□□□ -1.78
VPS36-202ENST00000462289 LINC00588Q9Y4M8 146 aa3.92□□□□□ -1.78
VPS36-202ENST00000462289 PHLDA3Q9Y5J5 127 aa3.92□□□□□ -1.78
VPS36-202ENST00000462289 DNAH11Q96DT5 4516 aa3.91□□□□□ -1.78
VPS36-202ENST00000462289 PKHD1P08F94 4074 aa3.91□□□□□ -1.78
VPS36-202ENST00000462289 SMIM27A0A1W2PRY6 76 aa3.91□□□□□ -1.78
VPS36-202ENST00000462289 XKRY2A2RUG3 117 aa3.91□□□□□ -1.78
VPS36-202ENST00000462289 A8MWL6 223 aa3.91□□□□□ -1.78
VPS36-202ENST00000462289 GZMBP10144 247 aa3.91□□□□□ -1.78
VPS36-202ENST00000462289 S100A4P26447 101 aaKnown RBP3.91□□□□□ -1.78
VPS36-202ENST00000462289 RAB4BP61018 213 aa3.91□□□□□ -1.78
VPS36-202ENST00000462289 CACNG7P62955 275 aa3.91□□□□□ -1.78
VPS36-202ENST00000462289 PNRC1Q12796 327 aaPredicted RBP3.91□□□□□ -1.78
VPS36-202ENST00000462289 RHOHQ15669 191 aa3.91□□□□□ -1.78
VPS36-202ENST00000462289 MRPL23Q16540 153 aaKnown RBP3.91□□□□□ -1.78
VPS36-202ENST00000462289 SOHLH1Q5JUK2 328 aa3.91□□□□□ -1.78
VPS36-202ENST00000462289 SH2D6Q7Z4S9 175 aa3.91□□□□□ -1.78
VPS36-202ENST00000462289 GATD1Q8NB37 220 aa3.91□□□□□ -1.78
VPS36-202ENST00000462289 FRZBQ92765 325 aa3.91□□□□□ -1.78
VPS36-202ENST00000462289 MSRB1Q9NZV6 116 aa3.91□□□□□ -1.78
VPS36-202ENST00000462289 ICOSQ9Y6W8 199 aa3.91□□□□□ -1.78
VPS36-202ENST00000462289 TMSB15BA0A087X1C1 80 aa3.9□□□□□ -1.79
VPS36-202ENST00000462289 A0A0J9YY99 117 aa3.9□□□□□ -1.79
VPS36-202ENST00000462289 LOC100131303A0A0U1RQF7 123 aa3.9□□□□□ -1.79
VPS36-202ENST00000462289 A0A1B0GXF2 115 aa3.9□□□□□ -1.79
VPS36-202ENST00000462289 TMEM218A2RU14 115 aa3.9□□□□□ -1.79
VPS36-202ENST00000462289 K7EP13 123 aa3.9□□□□□ -1.79
VPS36-202ENST00000462289 M0QY20 66 aa3.9□□□□□ -1.79
VPS36-202ENST00000462289 DNAH10OSP0CZ25 163 aa3.9□□□□□ -1.79
VPS36-202ENST00000462289 HTN3P15516 51 aa3.9□□□□□ -1.79
VPS36-202ENST00000462289 UBE2D3P61077 147 aa3.9□□□□□ -1.79
VPS36-202ENST00000462289 RAB14P61106 215 aa3.9□□□□□ -1.79
VPS36-202ENST00000462289 UBE2D2P62837 147 aa3.9□□□□□ -1.79
VPS36-202ENST00000462289 LYPD5Q6UWN5 251 aa3.9□□□□□ -1.79
VPS36-202ENST00000462289 LYZL1Q6UWQ5 148 aa3.9□□□□□ -1.79
VPS36-202ENST00000462289 NEGR1Q7Z3B1 354 aa3.9□□□□□ -1.79
VPS36-202ENST00000462289 C14orf178Q8N769 122 aaPredicted RBP3.9□□□□□ -1.79
VPS36-202ENST00000462289 MPLKIPQ8TAP9 179 aa3.9□□□□□ -1.79
VPS36-202ENST00000462289 AP1S3Q96PC3 154 aa3.9□□□□□ -1.79
VPS36-202ENST00000462289 CARHSP1Q9Y2V2 147 aaKnown RBP3.9□□□□□ -1.79
VPS36-202ENST00000462289 EPPK1P58107 5090 aaKnown RBP3.9□□□□□ -1.79
VPS36-202ENST00000462289 TRGV4A0A0C4DH28 118 aa3.89□□□□□ -1.79
VPS36-202ENST00000462289 HIGD1CA8MV81 97 aa3.89□□□□□ -1.79
VPS36-202ENST00000462289 M0R381 172 aa3.89□□□□□ -1.79
VPS36-202ENST00000462289 GATCO43716 136 aaKnown RBP3.89□□□□□ -1.79
VPS36-202ENST00000462289 LY6G6CO95867 125 aa3.89□□□□□ -1.79
VPS36-202ENST00000462289 NTF3P20783 257 aa3.89□□□□□ -1.79
VPS36-202ENST00000462289 EVI2AP22794 236 aa3.89□□□□□ -1.79
VPS36-202ENST00000462289 CCL18P55774 89 aa3.89□□□□□ -1.79
VPS36-202ENST00000462289 ERVFC1-1P60608 527 aa3.89□□□□□ -1.79
VPS36-202ENST00000462289 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
VPS36-202ENST00000462289 Q6ZRN7 208 aaPredicted RBP3.89□□□□□ -1.79
VPS36-202ENST00000462289 NEXN-AS1Q8NBZ9 246 aa3.89□□□□□ -1.79
VPS36-202ENST00000462289 SEC11CQ9BY50 192 aa3.89□□□□□ -1.79
VPS36-202ENST00000462289 TRBV7-3A0A075B6L6 115 aa3.88□□□□□ -1.79
VPS36-202ENST00000462289 TRBV6-5A0A0K0K1A5 114 aa3.88□□□□□ -1.79
VPS36-202ENST00000462289 NBDYA0A0U1RRE5 68 aa3.88□□□□□ -1.79
VPS36-202ENST00000462289 A0A1B0GUT8 65 aa3.88□□□□□ -1.79
VPS36-202ENST00000462289 RTL8CO15255 209 aa3.88□□□□□ -1.79
VPS36-202ENST00000462289 TRGC1P0CF51 173 aa3.88□□□□□ -1.79
VPS36-202ENST00000462289 LINC01556Q5JQF7 62 aa3.88□□□□□ -1.79
VPS36-202ENST00000462289 LELP1Q5T871 98 aa3.88□□□□□ -1.79
VPS36-202ENST00000462289 SPANXN1Q5VSR9 72 aa3.88□□□□□ -1.79
VPS36-202ENST00000462289 NUP35Q8NFH5 326 aa3.88□□□□□ -1.79
VPS36-202ENST00000462289 RNF185Q96GF1 192 aa3.88□□□□□ -1.79
VPS36-202ENST00000462289 PRADC1Q9BSG0 188 aa3.88□□□□□ -1.79
VPS36-202ENST00000462289 TMEM191AQ9H0A3 160 aa3.88□□□□□ -1.79
VPS36-202ENST00000462289 GTSF1LQ9H1H1 148 aa3.88□□□□□ -1.79
VPS36-202ENST00000462289 DPH3P1Q9H4G8 78 aa3.88□□□□□ -1.79
VPS36-202ENST00000462289 TMEM242Q9NWH2 141 aa3.88□□□□□ -1.79
VPS36-202ENST00000462289 DNAH5Q8TE73 4624 aa3.88□□□□□ -1.79
VPS36-202ENST00000462289 MUC21A0A0G2JKD1 596 aa3.87□□□□□ -1.79
VPS36-202ENST00000462289 MUC21A0A140T8X8 626 aa3.87□□□□□ -1.79
VPS36-202ENST00000462289 A0A1B0GVY2 172 aa3.87□□□□□ -1.79
VPS36-202ENST00000462289 A0A1B0GW15 77 aa3.87□□□□□ -1.79
VPS36-202ENST00000462289 PPP1R2P9O14990 202 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms