RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 COL6A6A6NMZ7 2263 aa2.8□□□□□ -1.96
CFHR3-204ENST00000461558 CSMD1Q96PZ7 3565 aa2.8□□□□□ -1.96
CFHR3-204ENST00000461558 ZFHX3Q15911 3703 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 H0Y8G0 127 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 H3BUX3 64 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 OVOL1O14753 267 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 HBDP02042 147 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 FCER1GP30273 86 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 CKS2P33552 79 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 FXYD7P58549 80 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 BLCAPP62952 87 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 LY6EQ16553 131 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 MPV17L2Q567V2 206 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 BVES-AS1Q5T3Y7 98 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 TMEM78Q5T7P6 136 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 CLEC2AQ6UVW9 174 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 ZFAND2AQ8N6M9 145 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 Q8N8P6 123 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 OR1N2Q8NGR9 330 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 IFI27L1Q96BM0 104 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 USMG5Q96IX5 58 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 LINC00477Q96M19 166 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 MAP1LC3AQ9H492 121 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 NXT2Q9NPJ8 142 aaKnown RBP2.79□□□□□ -1.96
CFHR3-204ENST00000461558 GOLT1BQ9Y3E0 138 aa2.79□□□□□ -1.96
CFHR3-204ENST00000461558 TPRP12270 2363 aaKnown RBP2.79□□□□□ -1.96
CFHR3-204ENST00000461558 MUC4Q99102 2169 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 ASH1LQ9NR48 2969 aaKnown RBP2.78□□□□□ -1.96
CFHR3-204ENST00000461558 SPTBN1Q01082 2364 aaKnown RBP2.78□□□□□ -1.96
CFHR3-204ENST00000461558 TRBV7-9A0A0J9YWB2 115 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 B4DSR2 109 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 HSBP1L1C9JCN9 74 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 K7EMT4 169 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 TAX1BP3O14907 124 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 CCL25O15444 150 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 IGHV3-11P01762 117 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 EVI2AP22794 236 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 ATP5J2P56134 94 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 DEFB1P60022 68 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 CACNG7P62955 275 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 FAM159AQ6UWV7 190 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 BOD1L2Q8IYS8 172 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 ZNF738Q8NE65 137 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 OR4X2Q8NGF9 303 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 OR8A1Q8NGG7 326 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 OR2K2Q8NGT1 345 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 SMPXQ9UHP9 88 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 TIMM8BQ9Y5J9 83 aaPredicted RBP2.78□□□□□ -1.96
CFHR3-204ENST00000461558 CFAP46Q8IYW2 2715 aa2.78□□□□□ -1.96
CFHR3-204ENST00000461558 IGSF10Q6WRI0 2623 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 VPS13CQ709C8 3753 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 CACNA1AO00555 2505 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 UTP20O75691 2785 aaKnown RBP2.77□□□□□ -1.97
CFHR3-204ENST00000461558 TRAV21A0A0B4J279 112 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 A0A0G2JLM5 398 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 H3BVH4 76 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 K7EQG2 157 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 SIVA1O15304 175 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 CD5LO43866 347 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 RNASE3P12724 160 aaKnown RBP2.77□□□□□ -1.97
CFHR3-204ENST00000461558 SLC25A16P16260 332 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 PSMB8P28062 276 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 LEPP41159 167 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 DEFB112Q30KQ8 113 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 C12orf54Q6X4T0 127 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 ADAMTSL5Q6ZMM2 481 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 OR10J6PQ8NGY7 276 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 MYOZ3Q8TDC0 251 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 TMEM158Q8WZ71 300 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 NRGNQ92686 78 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 MRAP2Q96G30 205 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 RHPN1-AS1Q9BWJ2 59 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 OCR1Q9BZK8 76 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 PEF1Q9UBV8 284 aaKnown RBP2.77□□□□□ -1.97
CFHR3-204ENST00000461558 HHLA3Q9XRX5 114 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 CHD8Q9HCK8 2581 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 SPTA1P02549 2419 aa2.77□□□□□ -1.97
CFHR3-204ENST00000461558 NBASA2RRP1 2371 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 NCOR2Q9Y618 2525 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 MED13LQ71F56 2210 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 PKD1L2Q7Z442 2459 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 IGKV2D-26A0A0A0MRZ7 120 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 TRAV26-2A0A0B4J265 109 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 F6UB75 175 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 J3QLI3 93 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 M0R381 172 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 GNRH2O43555 120 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 ATP5LO75964 103 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 SMIM17P0DL12 118 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 HLA-DRB4P13762 266 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 ASIPP42127 132 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 NDUFV3P56181 108 aaKnown RBP2.76□□□□□ -1.97
CFHR3-204ENST00000461558 LINC00315P59091 139 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 LAGE3Q14657 143 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 TMEM97Q5BJF2 176 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 PSMG4Q5JS54 123 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 SPANXN1Q5VSR9 72 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 C10orf99Q6UWK7 81 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 SMIM15Q7Z3B0 74 aa2.76□□□□□ -1.97
CFHR3-204ENST00000461558 PCP2Q8IVA1 136 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms