RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 GATA1P15976 413 aaPredicted RBP4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 UBE2D2P62837 147 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 Q6ZQT7 251 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 MUC7Q8TAX7 377 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 PSMG3-AS1Q96PY0 264 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 LOC107984640A0A0U1RRK4 108 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 DYNAPQ8N1N2 210 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 NRGNQ92686 78 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 CHCHD7Q9BUK0 85 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 P0C879 139 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 PDE6GP18545 87 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 MP68P56378 58 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 FOXI1Q12951 378 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 MIAQ16674 131 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 SERTAD4-AS1Q5TG53 156 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 Q6ZPA2 131 aa4.79□□□□□ -1.64
HLA-DQA1-205ENST00000460633 DOPEY2Q9Y3R5 2298 aa4.78□□□□□ -1.64
HLA-DQA1-205ENST00000460633 EGR2P11161 476 aaPredicted RBP4.78□□□□□ -1.64
HLA-DQA1-205ENST00000460633 PATE2Q6UY27 113 aa4.78□□□□□ -1.64
HLA-DQA1-205ENST00000460633 CARD19Q96LW7 228 aa4.78□□□□□ -1.64
HLA-DQA1-205ENST00000460633 IGF1P05019 195 aa4.78□□□□□ -1.64
HLA-DQA1-205ENST00000460633 CRYGBP07316 175 aa4.78□□□□□ -1.64
HLA-DQA1-205ENST00000460633 GDF5OSQ5U4N7 250 aa4.78□□□□□ -1.64
HLA-DQA1-205ENST00000460633 LINC00336Q6ZUF6 198 aa4.78□□□□□ -1.64
HLA-DQA1-205ENST00000460633 LIMD2Q9BT23 127 aa4.78□□□□□ -1.64
HLA-DQA1-205ENST00000460633 MT-ATP8P03928 68 aa4.78□□□□□ -1.64
HLA-DQA1-205ENST00000460633 DEFB136Q30KP8 78 aa4.78□□□□□ -1.64
HLA-DQA1-205ENST00000460633 CRIP3Q6Q6R5 217 aa4.78□□□□□ -1.64
HLA-DQA1-205ENST00000460633 FAM167A-AS1Q96KT0 104 aa4.78□□□□□ -1.64
HLA-DQA1-205ENST00000460633 LINC01620Q4KN68 170 aa4.78□□□□□ -1.64
HLA-DQA1-205ENST00000460633 UFSP1Q6NVU6 142 aa4.78□□□□□ -1.64
HLA-DQA1-205ENST00000460633 C11orf53Q8IXP5 236 aa4.78□□□□□ -1.64
HLA-DQA1-205ENST00000460633 GTF3C1Q12789 2109 aa4.78□□□□□ -1.64
HLA-DQA1-205ENST00000460633 A0A096LPF7 62 aa4.77□□□□□ -1.65
HLA-DQA1-205ENST00000460633 C1orf195Q5TG92 126 aa4.77□□□□□ -1.65
HLA-DQA1-205ENST00000460633 NDUFC2O95298 119 aa4.77□□□□□ -1.65
HLA-DQA1-205ENST00000460633 SPANXB1Q9NS25 103 aaPredicted RBP4.77□□□□□ -1.65
HLA-DQA1-205ENST00000460633 CCDC179H3BU77 68 aa4.77□□□□□ -1.65
HLA-DQA1-205ENST00000460633 C11orf71Q6IPW1 123 aa4.77□□□□□ -1.65
HLA-DQA1-205ENST00000460633 IGHV3-16A0A0C4DH30 117 aa4.77□□□□□ -1.65
HLA-DQA1-205ENST00000460633 CASC2Q6XLA1 102 aa4.77□□□□□ -1.65
HLA-DQA1-205ENST00000460633 HIGD1BQ9P298 99 aa4.77□□□□□ -1.65
HLA-DQA1-205ENST00000460633 TINCRA0A1B0GVN0 87 aa4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 ARHGAP21Q5T5U3 1957 aa4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 FER1L5A0AVI2 2057 aa4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 J3QQQ9 107 aa4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 IGLV2-8P01709 118 aa4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 TRACP01848 142 aa4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 CFC1BP0CG36 223 aa4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 CFC1P0CG37 223 aa4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 SPAG11BQ08648 103 aa4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 LINC01006Q8NI28 216 aa4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 MSRB1Q9NZV6 116 aa4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 BRI3O95415 125 aa4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 SRCAPQ6ZRS2 3230 aa4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 H0YGX0 51 aa4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 NDUFV3P56181 108 aaKnown RBP4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 Q6ZUT4 128 aa4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 TEN1Q86WV5 123 aa4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 ANKRD29Q8N6D5 301 aa4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 MAP6D1Q9H9H5 199 aa4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 C19orf84I3L1E1 186 aa4.76□□□□□ -1.65
HLA-DQA1-205ENST00000460633 CTSGP08311 255 aa4.75□□□□□ -1.65
HLA-DQA1-205ENST00000460633 TMEM258P61165 79 aa4.75□□□□□ -1.65
HLA-DQA1-205ENST00000460633 LMO4P61968 165 aa4.75□□□□□ -1.65
HLA-DQA1-205ENST00000460633 APRG1Q8IVJ8 170 aa4.75□□□□□ -1.65
HLA-DQA1-205ENST00000460633 SHANK1Q9Y566 2161 aa4.75□□□□□ -1.65
HLA-DQA1-205ENST00000460633 SDHAF1A6NFY7 115 aa4.75□□□□□ -1.65
HLA-DQA1-205ENST00000460633 A0A1B0GXF2 115 aa4.75□□□□□ -1.65
HLA-DQA1-205ENST00000460633 HRCT1Q6UXD1 115 aa4.75□□□□□ -1.65
HLA-DQA1-205ENST00000460633 FAM19A5Q7Z5A7 132 aaPredicted RBP4.75□□□□□ -1.65
HLA-DQA1-205ENST00000460633 AHCTF1Q8WYP5 2266 aa4.75□□□□□ -1.65
HLA-DQA1-205ENST00000460633 SPRNQ5BIV9 151 aa4.75□□□□□ -1.65
HLA-DQA1-205ENST00000460633 COL27A1Q8IZC6 1860 aaPredicted RBP4.75□□□□□ -1.65
HLA-DQA1-205ENST00000460633 hADV29S1A0JD25 119 aa4.74□□□□□ -1.65
HLA-DQA1-205ENST00000460633 HAMPP81172 84 aa4.74□□□□□ -1.65
HLA-DQA1-205ENST00000460633 DIRC1Q969H9 104 aa4.74□□□□□ -1.65
HLA-DQA1-205ENST00000460633 KLK12Q9UKR0 248 aa4.74□□□□□ -1.65
HLA-DQA1-205ENST00000460633 OTOGLQ3ZCN5 2332 aa4.74□□□□□ -1.65
HLA-DQA1-205ENST00000460633 TRBV7-3A0A075B6L6 115 aa4.74□□□□□ -1.65
HLA-DQA1-205ENST00000460633 IGHV7-81A0A0B4J1V7 117 aa4.74□□□□□ -1.65
HLA-DQA1-205ENST00000460633 PFN2P35080 140 aa4.74□□□□□ -1.65
HLA-DQA1-205ENST00000460633 RITA1Q96K30 269 aa4.74□□□□□ -1.65
HLA-DQA1-205ENST00000460633 C19orf71A6NCJ1 209 aa4.74□□□□□ -1.65
HLA-DQA1-205ENST00000460633 M0R2N4 97 aa4.73□□□□□ -1.65
HLA-DQA1-205ENST00000460633 LINC00694P0DN24 101 aa4.73□□□□□ -1.65
HLA-DQA1-205ENST00000460633 FAM222AQ5U5X8 452 aa4.73□□□□□ -1.65
HLA-DQA1-205ENST00000460633 MUC6Q6W4X9 2439 aa4.73□□□□□ -1.65
HLA-DQA1-205ENST00000460633 YLPM1P49750 1951 aaKnown RBP4.73□□□□□ -1.65
HLA-DQA1-205ENST00000460633 BRWD1-AS2P59051 145 aa4.73□□□□□ -1.65
HLA-DQA1-205ENST00000460633 DEFB114Q30KQ6 69 aa4.73□□□□□ -1.65
HLA-DQA1-205ENST00000460633 VSIG2Q96IQ7 327 aa4.73□□□□□ -1.65
HLA-DQA1-205ENST00000460633 TEX22C9J3V5 150 aa4.73□□□□□ -1.65
HLA-DQA1-205ENST00000460633 USP17L23D6RBM5 183 aa4.73□□□□□ -1.65
HLA-DQA1-205ENST00000460633 E7EUB6 86 aa4.73□□□□□ -1.65
HLA-DQA1-205ENST00000460633 Q8N9W7 124 aa4.73□□□□□ -1.65
HLA-DQA1-205ENST00000460633 ORMDL1Q9P0S3 153 aa4.73□□□□□ -1.65
HLA-DQA1-205ENST00000460633 RPL39LQ96EH5 51 aaKnown RBP4.73□□□□□ -1.65
HLA-DQA1-205ENST00000460633 NCOR1O75376 2440 aa4.73□□□□□ -1.65
HLA-DQA1-205ENST00000460633 AKAP6Q13023 2319 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms