RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 ATP5G1P05496 136 aa7.83□□□□□ -1.16
HERC4-207ENST00000460168 PRB4P10163 310 aaPredicted RBP7.83□□□□□ -1.16
HERC4-207ENST00000460168 FXYD2P54710 66 aa7.83□□□□□ -1.16
HERC4-207ENST00000460168 RPL11P62913 178 aaKnown RBP7.83□□□□□ -1.16
HERC4-207ENST00000460168 CD164Q04900 197 aa7.83□□□□□ -1.16
HERC4-207ENST00000460168 RRN3P1Q2M238 152 aa7.83□□□□□ -1.16
HERC4-207ENST00000460168 ZNF331Q9NQX6 463 aaPredicted RBP7.83□□□□□ -1.16
HERC4-207ENST00000460168 NSD1Q96L73 2696 aaPredicted RBP7.83□□□□□ -1.16
HERC4-207ENST00000460168 IGHV7-4-1A0A0J9YVY3 117 aa7.83□□□□□ -1.16
HERC4-207ENST00000460168 TRBV7-7A0A0K0K1E9 115 aa7.83□□□□□ -1.16
HERC4-207ENST00000460168 RBAKDNA6NC62 111 aa7.83□□□□□ -1.16
HERC4-207ENST00000460168 HOXD3P31249 432 aaPredicted RBP7.83□□□□□ -1.16
HERC4-207ENST00000460168 DEFB136Q30KP8 78 aa7.83□□□□□ -1.16
HERC4-207ENST00000460168 IGFL4Q6B9Z1 124 aa7.83□□□□□ -1.16
HERC4-207ENST00000460168 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.83□□□□□ -1.16
HERC4-207ENST00000460168 PRIMA1Q86XR5 153 aa7.83□□□□□ -1.16
HERC4-207ENST00000460168 LINC01006Q8NI28 216 aa7.83□□□□□ -1.16
HERC4-207ENST00000460168 SLC50A1Q9BRV3 221 aa7.83□□□□□ -1.16
HERC4-207ENST00000460168 RHPN1-AS1Q9BWJ2 59 aa7.83□□□□□ -1.16
HERC4-207ENST00000460168 K7EMT4 169 aa7.82□□□□□ -1.16
HERC4-207ENST00000460168 HAX1O00165 279 aa7.82□□□□□ -1.16
HERC4-207ENST00000460168 DPM2O94777 84 aa7.82□□□□□ -1.16
HERC4-207ENST00000460168 LEPROTL1O95214 131 aa7.82□□□□□ -1.16
HERC4-207ENST00000460168 IGLV2-8P01709 118 aa7.82□□□□□ -1.16
HERC4-207ENST00000460168 FRMD6-AS1P0C7T7 363 aa7.82□□□□□ -1.16
HERC4-207ENST00000460168 SYNJ2BPP57105 145 aa7.82□□□□□ -1.16
HERC4-207ENST00000460168 DGAT2L7PQ6IED9 249 aa7.82□□□□□ -1.16
HERC4-207ENST00000460168 C18orf65Q6ZTR6 163 aa7.82□□□□□ -1.16
HERC4-207ENST00000460168 CEND1Q8N111 149 aa7.82□□□□□ -1.16
HERC4-207ENST00000460168 C11orf44Q8N8P7 122 aa7.82□□□□□ -1.16
HERC4-207ENST00000460168 KLHL30-AS1Q8NEE0 82 aa7.82□□□□□ -1.16
HERC4-207ENST00000460168 C4orf3Q8WVX3 66 aa7.82□□□□□ -1.16
HERC4-207ENST00000460168 DLX4Q92988 240 aaPredicted RBP7.82□□□□□ -1.16
HERC4-207ENST00000460168 CHCHD1Q96BP2 118 aaKnown RBP7.82□□□□□ -1.16
HERC4-207ENST00000460168 SETD2Q9BYW2 2564 aaPredicted RBP7.82□□□□□ -1.16
HERC4-207ENST00000460168 NCR2O95944 276 aa7.82□□□□□ -1.16
HERC4-207ENST00000460168 FOXA3P55318 350 aaPredicted RBP7.82□□□□□ -1.16
HERC4-207ENST00000460168 CT83Q5H943 113 aa7.82□□□□□ -1.16
HERC4-207ENST00000460168 ANKRD29Q8N6D5 301 aa7.82□□□□□ -1.16
HERC4-207ENST00000460168 C16orf95Q9H693 158 aa7.82□□□□□ -1.16
HERC4-207ENST00000460168 LTAP01374 205 aa7.81□□□□□ -1.16
HERC4-207ENST00000460168 HLA-DMBP28068 263 aa7.81□□□□□ -1.16
HERC4-207ENST00000460168 PRNTQ86SH4 94 aa7.81□□□□□ -1.16
HERC4-207ENST00000460168 Q86TA4 180 aa7.81□□□□□ -1.16
HERC4-207ENST00000460168 RNF182Q8N6D2 247 aa7.81□□□□□ -1.16
HERC4-207ENST00000460168 TMEM75Q8N9X5 138 aa7.81□□□□□ -1.16
HERC4-207ENST00000460168 C16orf92Q96LL3 132 aa7.81□□□□□ -1.16
HERC4-207ENST00000460168 BAHCC1Q9P281 2608 aa7.81□□□□□ -1.16
HERC4-207ENST00000460168 IGKV3-7A0A075B6H7 116 aa7.8□□□□□ -1.16
HERC4-207ENST00000460168 K7ERJ3 54 aa7.8□□□□□ -1.16
HERC4-207ENST00000460168 CHEK1O14757 476 aa7.8□□□□□ -1.16
HERC4-207ENST00000460168 HIST2H2BDQ6DRA6 164 aa7.8□□□□□ -1.16
HERC4-207ENST00000460168 IGKV2-40A0A087WW87 121 aaPredicted RBP7.8□□□□□ -1.16
HERC4-207ENST00000460168 LINC01619G3V211 115 aa7.8□□□□□ -1.16
HERC4-207ENST00000460168 LGALS9O00182 355 aa7.8□□□□□ -1.16
HERC4-207ENST00000460168 IGKV2D-40P01614 121 aaPredicted RBP7.8□□□□□ -1.16
HERC4-207ENST00000460168 IGLV2-11P01706 119 aa7.8□□□□□ -1.16
HERC4-207ENST00000460168 AP5S1Q9NUS5 200 aa7.8□□□□□ -1.16
HERC4-207ENST00000460168 SLURP1P55000 103 aa7.79□□□□□ -1.16
HERC4-207ENST00000460168 C15orf53Q8NAA6 179 aa7.79□□□□□ -1.16
HERC4-207ENST00000460168 ODF3Q96PU9 254 aa7.79□□□□□ -1.16
HERC4-207ENST00000460168 IMUPQ9GZP8 106 aa7.79□□□□□ -1.16
HERC4-207ENST00000460168 FN1P02751 2386 aaKnown RBP7.79□□□□□ -1.16
HERC4-207ENST00000460168 IGHV1-24A0A0C4DH33 117 aa7.79□□□□□ -1.16
HERC4-207ENST00000460168 CD28P10747 220 aa7.79□□□□□ -1.16
HERC4-207ENST00000460168 OSTCQ9NRP0 149 aa7.79□□□□□ -1.16
HERC4-207ENST00000460168 NHP2Q9NX24 153 aaKnown RBP7.79□□□□□ -1.16
HERC4-207ENST00000460168 SETXQ7Z333 2677 aaKnown RBP7.79□□□□□ -1.16
HERC4-207ENST00000460168 TRAV8-2A0A0B4J237 113 aa7.78□□□□□ -1.16
HERC4-207ENST00000460168 CD7P09564 240 aa7.78□□□□□ -1.16
HERC4-207ENST00000460168 COX7CP15954 63 aa7.78□□□□□ -1.16
HERC4-207ENST00000460168 LEPP41159 167 aa7.78□□□□□ -1.16
HERC4-207ENST00000460168 PSMG4Q5JS54 123 aa7.78□□□□□ -1.16
HERC4-207ENST00000460168 POM121L12Q8N7R1 296 aa7.78□□□□□ -1.16
HERC4-207ENST00000460168 URB1-AS1Q96HZ7 61 aa7.78□□□□□ -1.16
HERC4-207ENST00000460168 FAM19A4Q96LR4 140 aa7.78□□□□□ -1.16
HERC4-207ENST00000460168 C2orf48Q96LS8 159 aa7.78□□□□□ -1.16
HERC4-207ENST00000460168 TRBV6-1A0A0K0K1D8 114 aa7.78□□□□□ -1.16
HERC4-207ENST00000460168 TRACP01848 142 aa7.78□□□□□ -1.16
HERC4-207ENST00000460168 LYRM7Q5U5X0 104 aa7.78□□□□□ -1.16
HERC4-207ENST00000460168 ZNF493Q6ZR52 646 aa7.78□□□□□ -1.16
HERC4-207ENST00000460168 LINC00173Q6ZV60 143 aa7.78□□□□□ -1.16
HERC4-207ENST00000460168 C1orf158Q8N1D5 194 aa7.78□□□□□ -1.16
HERC4-207ENST00000460168 V9GYV3 84 aa7.78□□□□□ -1.16
HERC4-207ENST00000460168 F8P00451 2351 aa7.77□□□□□ -1.17
HERC4-207ENST00000460168 A8MWV9 139 aa7.77□□□□□ -1.17
HERC4-207ENST00000460168 C12orf74Q32Q52 190 aa7.77□□□□□ -1.17
HERC4-207ENST00000460168 Q8TAT8 98 aa7.77□□□□□ -1.17
HERC4-207ENST00000460168 MRPL53Q96EL3 112 aaKnown RBP7.77□□□□□ -1.17
HERC4-207ENST00000460168 PEMTQ9UBM1 199 aa7.77□□□□□ -1.17
HERC4-207ENST00000460168 PRAC2D3DTV9 90 aa7.76□□□□□ -1.17
HERC4-207ENST00000460168 SOCS3O14543 225 aa7.76□□□□□ -1.17
HERC4-207ENST00000460168 P01737 135 aa7.76□□□□□ -1.17
HERC4-207ENST00000460168 WFDC3Q8IUB2 231 aa7.76□□□□□ -1.17
HERC4-207ENST00000460168 C8orf49Q96NF6 230 aa7.76□□□□□ -1.17
HERC4-207ENST00000460168 NDUFC2O95298 119 aa7.75□□□□□ -1.17
HERC4-207ENST00000460168 PROK1P58294 105 aa7.75□□□□□ -1.17
HERC4-207ENST00000460168 ERCC8Q13216 396 aa7.75□□□□□ -1.17
HERC4-207ENST00000460168 LINC00322Q6ZN03 302 aaPredicted RBP7.75□□□□□ -1.17
HERC4-207ENST00000460168 PRR25Q96S07 402 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms