RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 TRBV7-3A0A075B6L6 115 aa8.76□□□□□ -1.01
COL18A1-206ENST00000459895 IGHV3-38A0A0C4DH36 116 aa8.76□□□□□ -1.01
COL18A1-206ENST00000459895 NBDYA0A0U1RRE5 68 aa8.76□□□□□ -1.01
COL18A1-206ENST00000459895 A0A1B0GXF2 115 aa8.76□□□□□ -1.01
COL18A1-206ENST00000459895 MT-ND4LP03901 98 aa8.76□□□□□ -1.01
COL18A1-206ENST00000459895 RIGQ13278 110 aa8.76□□□□□ -1.01
COL18A1-206ENST00000459895 C10orf91Q5T1B1 145 aa8.76□□□□□ -1.01
COL18A1-206ENST00000459895 SMIM15Q7Z3B0 74 aa8.76□□□□□ -1.01
COL18A1-206ENST00000459895 ANAPC16Q96DE5 110 aa8.76□□□□□ -1.01
COL18A1-206ENST00000459895 Q9H8V8 135 aa8.76□□□□□ -1.01
COL18A1-206ENST00000459895 H7C1H1 209 aa8.75□□□□□ -1.01
COL18A1-206ENST00000459895 SIVA1O15304 175 aa8.75□□□□□ -1.01
COL18A1-206ENST00000459895 LELP1Q5T871 98 aa8.75□□□□□ -1.01
COL18A1-206ENST00000459895 RASL11AQ6T310 242 aa8.75□□□□□ -1.01
COL18A1-206ENST00000459895 AMN1Q8IY45 258 aa8.75□□□□□ -1.01
COL18A1-206ENST00000459895 GATD1Q8NB37 220 aa8.75□□□□□ -1.01
COL18A1-206ENST00000459895 RPL39LQ96EH5 51 aaKnown RBP8.75□□□□□ -1.01
COL18A1-206ENST00000459895 RNF185Q96GF1 192 aa8.75□□□□□ -1.01
COL18A1-206ENST00000459895 TMEM191AQ9H0A3 160 aa8.75□□□□□ -1.01
COL18A1-206ENST00000459895 HECTD4Q9Y4D8 3996 aa8.75□□□□□ -1.01
COL18A1-206ENST00000459895 FAT2Q9NYQ8 4349 aa8.74□□□□□ -1.01
COL18A1-206ENST00000459895 GAS8-AS1O95177 125 aa8.74□□□□□ -1.01
COL18A1-206ENST00000459895 NCR2O95944 276 aa8.74□□□□□ -1.01
COL18A1-206ENST00000459895 CAMPP49913 170 aa8.74□□□□□ -1.01
COL18A1-206ENST00000459895 HBBP68871 147 aa8.74□□□□□ -1.01
COL18A1-206ENST00000459895 TTC32Q5I0X7 151 aa8.74□□□□□ -1.01
COL18A1-206ENST00000459895 OR10J3Q5JRS4 329 aa8.74□□□□□ -1.01
COL18A1-206ENST00000459895 Q8N3U1 123 aa8.74□□□□□ -1.01
COL18A1-206ENST00000459895 DNAH10OSP0CZ25 163 aa8.73□□□□□ -1.01
COL18A1-206ENST00000459895 SMKR1H3BMG3 65 aa8.72□□□□□ -1.01
COL18A1-206ENST00000459895 RPS10P46783 165 aaKnown RBP8.72□□□□□ -1.01
COL18A1-206ENST00000459895 ATP5L2Q7Z4Y8 100 aa8.72□□□□□ -1.01
COL18A1-206ENST00000459895 DNAJC30Q96LL9 226 aa8.72□□□□□ -1.01
COL18A1-206ENST00000459895 TNFRSF18Q9Y5U5 241 aa8.72□□□□□ -1.01
COL18A1-206ENST00000459895 EPPK1P58107 5090 aaKnown RBP8.71□□□□□ -1.01
COL18A1-206ENST00000459895 TRAV8-6A0A0B4J262 113 aa8.71□□□□□ -1.02
COL18A1-206ENST00000459895 A0A1B0GW15 77 aa8.71□□□□□ -1.02
COL18A1-206ENST00000459895 RAB4AP20338 218 aa8.71□□□□□ -1.02
COL18A1-206ENST00000459895 RHEBQ15382 184 aa8.71□□□□□ -1.02
COL18A1-206ENST00000459895 CLRN3Q8NCR9 226 aa8.71□□□□□ -1.02
COL18A1-206ENST00000459895 MRAP2Q96G30 205 aa8.71□□□□□ -1.02
COL18A1-206ENST00000459895 NIT2Q9NQR4 276 aa8.71□□□□□ -1.02
COL18A1-206ENST00000459895 DNAH17Q9UFH2 4485 aa8.71□□□□□ -1.02
COL18A1-206ENST00000459895 A0A087WWC5 75 aa8.7□□□□□ -1.02
COL18A1-206ENST00000459895 C7orf77A4D0Y5 90 aa8.7□□□□□ -1.02
COL18A1-206ENST00000459895 RTL8CO15255 209 aa8.7□□□□□ -1.02
COL18A1-206ENST00000459895 LINC01556Q5JQF7 62 aa8.7□□□□□ -1.02
COL18A1-206ENST00000459895 FAM104BQ5XKR9 115 aa8.7□□□□□ -1.02
COL18A1-206ENST00000459895 NTM-AS1Q6ZSK4 140 aa8.7□□□□□ -1.02
COL18A1-206ENST00000459895 DAZ4Q86SG3 579 aaKnown RBP8.7□□□□□ -1.02
COL18A1-206ENST00000459895 DEFB104AQ8WTQ1 72 aa8.7□□□□□ -1.02
COL18A1-206ENST00000459895 CTDSP1Q9GZU7 261 aa8.7□□□□□ -1.02
COL18A1-206ENST00000459895 DAZ3Q9NR90 486 aaKnown RBP8.7□□□□□ -1.02
COL18A1-206ENST00000459895 TRBV6-8A0A0A6YYG3 113 aa8.69□□□□□ -1.02
COL18A1-206ENST00000459895 IGHV3-30P01768 117 aa8.69□□□□□ -1.02
COL18A1-206ENST00000459895 IGHV3-33P01772 117 aa8.69□□□□□ -1.02
COL18A1-206ENST00000459895 APOC3P02656 99 aa8.69□□□□□ -1.02
COL18A1-206ENST00000459895 S100A8P05109 93 aa8.69□□□□□ -1.02
COL18A1-206ENST00000459895 IGHV3-30-3P0DP02 117 aa8.69□□□□□ -1.02
COL18A1-206ENST00000459895 IGHV3-30-5P0DP03 117 aa8.69□□□□□ -1.02
COL18A1-206ENST00000459895 MRPL51Q4U2R6 128 aaKnown RBP8.69□□□□□ -1.02
COL18A1-206ENST00000459895 NDUFA5Q16718 116 aa8.68□□□□□ -1.02
COL18A1-206ENST00000459895 C1orf134Q5TEV5 83 aa8.68□□□□□ -1.02
COL18A1-206ENST00000459895 NIT1Q86X76 327 aa8.68□□□□□ -1.02
COL18A1-206ENST00000459895 SLC7A5P1Q8MH63 180 aa8.68□□□□□ -1.02
COL18A1-206ENST00000459895 C6orf223Q8N319 242 aa8.68□□□□□ -1.02
COL18A1-206ENST00000459895 NRACQ8N912 160 aa8.68□□□□□ -1.02
COL18A1-206ENST00000459895 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.68□□□□□ -1.02
COL18A1-206ENST00000459895 FRZBQ92765 325 aa8.68□□□□□ -1.02
COL18A1-206ENST00000459895 BTF3L4Q96K17 158 aa8.68□□□□□ -1.02
COL18A1-206ENST00000459895 IMMP2LQ96T52 175 aa8.68□□□□□ -1.02
COL18A1-206ENST00000459895 RPS10P5Q9NQ39 176 aa8.68□□□□□ -1.02
COL18A1-206ENST00000459895 TRBV6-5A0A0K0K1A5 114 aa8.67□□□□□ -1.02
COL18A1-206ENST00000459895 SDHAF1A6NFY7 115 aa8.67□□□□□ -1.02
COL18A1-206ENST00000459895 KCNIP4Q6PIL6 250 aa8.67□□□□□ -1.02
COL18A1-206ENST00000459895 SVBPQ8N300 66 aa8.67□□□□□ -1.02
COL18A1-206ENST00000459895 URGCP-MRPS24S4R325 110 aa8.67□□□□□ -1.02
COL18A1-206ENST00000459895 TRBV25-1A0A075B6N4 114 aa8.66□□□□□ -1.02
COL18A1-206ENST00000459895 IGHV1-24A0A0C4DH33 117 aa8.66□□□□□ -1.02
COL18A1-206ENST00000459895 D6R8Y8 96 aa8.66□□□□□ -1.02
COL18A1-206ENST00000459895 IQCJQ1A5X6 159 aa8.66□□□□□ -1.02
COL18A1-206ENST00000459895 MPV17L2Q567V2 206 aa8.66□□□□□ -1.02
COL18A1-206ENST00000459895 TMEM97Q5BJF2 176 aa8.66□□□□□ -1.02
COL18A1-206ENST00000459895 CHCHD5Q9BSY4 110 aa8.66□□□□□ -1.02
COL18A1-206ENST00000459895 TMEM70Q9BUB7 260 aa8.66□□□□□ -1.02
COL18A1-206ENST00000459895 TMEM242Q9NWH2 141 aa8.66□□□□□ -1.02
COL18A1-206ENST00000459895 TRAV9-1A0A075B6T8 112 aa8.65□□□□□ -1.02
COL18A1-206ENST00000459895 SNAPINO95295 136 aa8.65□□□□□ -1.02
COL18A1-206ENST00000459895 COTL1Q14019 142 aa8.65□□□□□ -1.02
COL18A1-206ENST00000459895 Q6ZRN7 208 aaPredicted RBP8.65□□□□□ -1.02
COL18A1-206ENST00000459895 C10orf126Q8N4M7 172 aa8.65□□□□□ -1.02
COL18A1-206ENST00000459895 ST20Q9HBF5 79 aa8.65□□□□□ -1.02
COL18A1-206ENST00000459895 TSHBP01222 138 aa8.64□□□□□ -1.03
COL18A1-206ENST00000459895 NPYP01303 97 aa8.64□□□□□ -1.03
COL18A1-206ENST00000459895 APCSP02743 223 aa8.64□□□□□ -1.03
COL18A1-206ENST00000459895 S100PP25815 95 aa8.64□□□□□ -1.03
COL18A1-206ENST00000459895 AMTP48728 403 aa8.64□□□□□ -1.03
COL18A1-206ENST00000459895 GAGE6Q13070 117 aa8.64□□□□□ -1.03
COL18A1-206ENST00000459895 TMEM136Q6ZRR5 245 aa8.64□□□□□ -1.03
COL18A1-206ENST00000459895 TMEM243Q9BU79 118 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms