RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ADIRFQ15847 76 aa7.6□□□□□ -1.19
USP39-210ENST00000459775 PRR9Q5T870 116 aa7.6□□□□□ -1.19
USP39-210ENST00000459775 A0A0J9YX75 114 aa7.6□□□□□ -1.19
USP39-210ENST00000459775 VCYO14598 125 aa7.6□□□□□ -1.19
USP39-210ENST00000459775 LTAP01374 205 aa7.6□□□□□ -1.19
USP39-210ENST00000459775 PRB2P02812 416 aaPredicted RBP7.6□□□□□ -1.19
USP39-210ENST00000459775 ZNF80P51504 273 aaPredicted RBP7.6□□□□□ -1.19
USP39-210ENST00000459775 OR10J6PQ8NGY7 276 aa7.6□□□□□ -1.19
USP39-210ENST00000459775 SDF2L1Q9HCN8 221 aa7.6□□□□□ -1.19
USP39-210ENST00000459775 TMEM242Q9NWH2 141 aa7.6□□□□□ -1.19
USP39-210ENST00000459775 CRIP1P50238 77 aa7.59□□□□□ -1.19
USP39-210ENST00000459775 IBA57Q5T440 356 aaKnown RBP7.59□□□□□ -1.19
USP39-210ENST00000459775 PRR26Q8N8Z3 221 aa7.59□□□□□ -1.19
USP39-210ENST00000459775 TMEM75Q8N9X5 138 aa7.59□□□□□ -1.19
USP39-210ENST00000459775 ZC2HC1AQ96GY0 325 aa7.59□□□□□ -1.19
USP39-210ENST00000459775 FMC1Q96HJ9 113 aa7.59□□□□□ -1.19
USP39-210ENST00000459775 SPANXDQ9BXN6 97 aa7.59□□□□□ -1.19
USP39-210ENST00000459775 TRAV12-2A0A075B6T6 113 aa7.58□□□□□ -1.2
USP39-210ENST00000459775 MT-ATP8P03928 68 aa7.58□□□□□ -1.2
USP39-210ENST00000459775 INSL3P51460 131 aa7.58□□□□□ -1.2
USP39-210ENST00000459775 ZNF138P52744 262 aa7.58□□□□□ -1.2
USP39-210ENST00000459775 SPATA45Q537H7 98 aa7.58□□□□□ -1.2
USP39-210ENST00000459775 C9orf47Q6ZRZ4 202 aa7.58□□□□□ -1.2
USP39-210ENST00000459775 ZNF492Q9P255 531 aa7.58□□□□□ -1.2
USP39-210ENST00000459775 TGP01266 2768 aa7.58□□□□□ -1.2
USP39-210ENST00000459775 TRAV2A0A0B4J234 112 aa7.58□□□□□ -1.2
USP39-210ENST00000459775 H3BMM0 161 aa7.58□□□□□ -1.2
USP39-210ENST00000459775 NDUFC2O95298 119 aa7.58□□□□□ -1.2
USP39-210ENST00000459775 Q0VG73 95 aa7.58□□□□□ -1.2
USP39-210ENST00000459775 SPINK13Q1W4C9 94 aa7.58□□□□□ -1.2
USP39-210ENST00000459775 EBLN2Q6P2I7 272 aa7.58□□□□□ -1.2
USP39-210ENST00000459775 C9orf118A6NHY6 69 aa7.57□□□□□ -1.2
USP39-210ENST00000459775 F8W1H4 67 aa7.57□□□□□ -1.2
USP39-210ENST00000459775 PRM2P04554 102 aa7.57□□□□□ -1.2
USP39-210ENST00000459775 TTC32Q5I0X7 151 aa7.57□□□□□ -1.2
USP39-210ENST00000459775 LINC01561Q8N1V8 128 aa7.57□□□□□ -1.2
USP39-210ENST00000459775 C11orf45Q8TAV5 145 aa7.57□□□□□ -1.2
USP39-210ENST00000459775 TMEM70Q9BUB7 260 aa7.57□□□□□ -1.2
USP39-210ENST00000459775 ST20Q9HBF5 79 aa7.57□□□□□ -1.2
USP39-210ENST00000459775 NBEAL2Q6ZNJ1 2754 aa7.57□□□□□ -1.2
USP39-210ENST00000459775 RBAKDNA6NC62 111 aa7.57□□□□□ -1.2
USP39-210ENST00000459775 C9JCJ5 164 aa7.57□□□□□ -1.2
USP39-210ENST00000459775 FOXI1Q12951 378 aa7.57□□□□□ -1.2
USP39-210ENST00000459775 BVES-AS1Q5T3Y7 98 aa7.57□□□□□ -1.2
USP39-210ENST00000459775 AMTNQ6UX39 209 aa7.57□□□□□ -1.2
USP39-210ENST00000459775 ZFAND2AQ8N6M9 145 aa7.57□□□□□ -1.2
USP39-210ENST00000459775 CARD19Q96LW7 228 aa7.57□□□□□ -1.2
USP39-210ENST00000459775 Q9H8V8 135 aa7.57□□□□□ -1.2
USP39-210ENST00000459775 X6R8D5 127 aa7.57□□□□□ -1.2
USP39-210ENST00000459775 HLA-DRB4P13762 266 aa7.56□□□□□ -1.2
USP39-210ENST00000459775 RNASE4P34096 147 aaKnown RBP7.56□□□□□ -1.2
USP39-210ENST00000459775 KPRPQ5T749 579 aaPredicted RBP7.56□□□□□ -1.2
USP39-210ENST00000459775 AP1S3Q96PC3 154 aa7.56□□□□□ -1.2
USP39-210ENST00000459775 HLA-DRB4X5D2U9 266 aa7.56□□□□□ -1.2
USP39-210ENST00000459775 H3BRM9 83 aa7.55□□□□□ -1.2
USP39-210ENST00000459775 SEC11AP67812 179 aa7.55□□□□□ -1.2
USP39-210ENST00000459775 TRPT1Q86TN4 253 aaKnown RBP7.55□□□□□ -1.2
USP39-210ENST00000459775 FAM19A4Q96LR4 140 aa7.55□□□□□ -1.2
USP39-210ENST00000459775 C11orf21Q9P2W6 132 aa7.55□□□□□ -1.2
USP39-210ENST00000459775 TMSB15BA0A087X1C1 80 aa7.55□□□□□ -1.2
USP39-210ENST00000459775 RBMY1A1P0DJD3 496 aaKnown RBP7.55□□□□□ -1.2
USP39-210ENST00000459775 RBMY1CP0DJD4 496 aa7.55□□□□□ -1.2
USP39-210ENST00000459775 RBMY1FQ15415 496 aaKnown RBP7.55□□□□□ -1.2
USP39-210ENST00000459775 GTSCR1Q86UQ5 136 aa7.55□□□□□ -1.2
USP39-210ENST00000459775 XCL2Q9UBD3 114 aa7.55□□□□□ -1.2
USP39-210ENST00000459775 TRAV12-3A0A0B4J271 114 aa7.54□□□□□ -1.2
USP39-210ENST00000459775 SH2D1AO60880 128 aa7.54□□□□□ -1.2
USP39-210ENST00000459775 MUC21Q5SSG8 566 aa7.54□□□□□ -1.2
USP39-210ENST00000459775 ATP6V0E2Q8NHE4 81 aa7.54□□□□□ -1.2
USP39-210ENST00000459775 TRBV6-1A0A0K0K1D8 114 aa7.54□□□□□ -1.2
USP39-210ENST00000459775 SAMD5Q5TGI4 173 aa7.54□□□□□ -1.2
USP39-210ENST00000459775 PRKDCP78527 4128 aaKnown RBP7.54□□□□□ -1.2
USP39-210ENST00000459775 DPM2O94777 84 aa7.53□□□□□ -1.2
USP39-210ENST00000459775 GIG44P09565 113 aaPredicted RBP7.53□□□□□ -1.2
USP39-210ENST00000459775 GAGE2BQ13066 116 aa7.53□□□□□ -1.2
USP39-210ENST00000459775 GAGE2EQ4V326 116 aa7.53□□□□□ -1.2
USP39-210ENST00000459775 ZNF575Q86XF7 245 aa7.53□□□□□ -1.2
USP39-210ENST00000459775 TMEM191AQ9H0A3 160 aa7.53□□□□□ -1.2
USP39-210ENST00000459775 GAGE2DQ9UEU5 116 aa7.53□□□□□ -1.2
USP39-210ENST00000459775 J3QQQ9 107 aa7.52□□□□□ -1.2
USP39-210ENST00000459775 DUSP14O95147 198 aaKnown RBP7.52□□□□□ -1.2
USP39-210ENST00000459775 OR5AL1P0C617 328 aa7.52□□□□□ -1.2
USP39-210ENST00000459775 HTN1P15515 57 aa7.52□□□□□ -1.2
USP39-210ENST00000459775 HERVK_113P63121 156 aa7.52□□□□□ -1.2
USP39-210ENST00000459775 EGFEM1PQ0D2K5 195 aa7.52□□□□□ -1.2
USP39-210ENST00000459775 ATOH7Q8N100 152 aa7.52□□□□□ -1.2
USP39-210ENST00000459775 PYGO2Q9BRQ0 406 aa7.52□□□□□ -1.2
USP39-210ENST00000459775 C19orf71A6NCJ1 209 aa7.52□□□□□ -1.21
USP39-210ENST00000459775 KLLNB2CW77 178 aa7.52□□□□□ -1.21
USP39-210ENST00000459775 TMEM262E9PQX1 116 aa7.52□□□□□ -1.21
USP39-210ENST00000459775 MRPL55Q7Z7F7 128 aaKnown RBP7.52□□□□□ -1.21
USP39-210ENST00000459775 LY96Q9Y6Y9 160 aa7.52□□□□□ -1.21
USP39-210ENST00000459775 IGHV3OR16-12A0A075B7B8 117 aa7.51□□□□□ -1.21
USP39-210ENST00000459775 MUC21A0A0G2JKD1 596 aa7.51□□□□□ -1.21
USP39-210ENST00000459775 MUC21A0A140T8X8 626 aa7.51□□□□□ -1.21
USP39-210ENST00000459775 GRIFINA4D1Z8 144 aa7.51□□□□□ -1.21
USP39-210ENST00000459775 A8MTW9 85 aa7.51□□□□□ -1.21
USP39-210ENST00000459775 CRISP2P16562 243 aa7.51□□□□□ -1.21
USP39-210ENST00000459775 PNRC1Q12796 327 aaPredicted RBP7.51□□□□□ -1.21
USP39-210ENST00000459775 OR10G8Q8NGN5 311 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 277.6 ms