RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 SPATA25Q9BR10 227 aa7.36□□□□□ -1.23
NEDD9-205ENST00000459670 C20orf78Q9BR46 151 aa7.36□□□□□ -1.23
NEDD9-205ENST00000459670 SMIM2Q9BVW6 85 aa7.36□□□□□ -1.23
NEDD9-205ENST00000459670 CSMD3Q7Z407 3707 aa7.36□□□□□ -1.23
NEDD9-205ENST00000459670 DEFB4AO15263 64 aa7.35□□□□□ -1.23
NEDD9-205ENST00000459670 P0DMU3 169 aa7.35□□□□□ -1.23
NEDD9-205ENST00000459670 FAM231AP0DMU4 169 aa7.35□□□□□ -1.23
NEDD9-205ENST00000459670 FAM231CP0DMU5 169 aa7.35□□□□□ -1.23
NEDD9-205ENST00000459670 SUMO2P61956 95 aaKnown RBP7.35□□□□□ -1.23
NEDD9-205ENST00000459670 SNRPEP62304 92 aaKnown RBP7.35□□□□□ -1.23
NEDD9-205ENST00000459670 ZNF56Q15929 161 aa7.35□□□□□ -1.23
NEDD9-205ENST00000459670 NEXN-AS1Q8NBZ9 246 aa7.35□□□□□ -1.23
NEDD9-205ENST00000459670 PACRGQ96M98 296 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-205ENST00000459670 TMEM70Q9BUB7 260 aa7.35□□□□□ -1.23
NEDD9-205ENST00000459670 TRBV27A0A0K0K1C4 114 aa7.34□□□□□ -1.23
NEDD9-205ENST00000459670 TRBV6-4A0A1B0GX49 114 aa7.34□□□□□ -1.23
NEDD9-205ENST00000459670 SMIM17P0DL12 118 aa7.34□□□□□ -1.23
NEDD9-205ENST00000459670 IFI27P40305 119 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-205ENST00000459670 NDUFA6P56556 154 aa7.34□□□□□ -1.23
NEDD9-205ENST00000459670 Q8N8P6 123 aa7.34□□□□□ -1.23
NEDD9-205ENST00000459670 OR4C5Q8NGB2 326 aa7.34□□□□□ -1.23
NEDD9-205ENST00000459670 CHCHD1Q96BP2 118 aaKnown RBP7.34□□□□□ -1.23
NEDD9-205ENST00000459670 NIT2Q9NQR4 276 aa7.34□□□□□ -1.23
NEDD9-205ENST00000459670 IGHV3-73A0A0B4J1V6 119 aa7.33□□□□□ -1.24
NEDD9-205ENST00000459670 TRBV10-1A0A0K0K1A3 114 aa7.33□□□□□ -1.24
NEDD9-205ENST00000459670 TEX48A0A1B0GUV7 120 aa7.33□□□□□ -1.24
NEDD9-205ENST00000459670 K7EQD1 137 aa7.33□□□□□ -1.24
NEDD9-205ENST00000459670 C12orf74Q32Q52 190 aa7.33□□□□□ -1.24
NEDD9-205ENST00000459670 NIT1Q86X76 327 aa7.33□□□□□ -1.24
NEDD9-205ENST00000459670 SLC25A29Q8N8R3 303 aa7.33□□□□□ -1.24
NEDD9-205ENST00000459670 HIST1H2BLQ99880 126 aa7.33□□□□□ -1.24
NEDD9-205ENST00000459670 MAP1LC3AQ9H492 121 aa7.33□□□□□ -1.24
NEDD9-205ENST00000459670 IGHV1-24A0A0C4DH33 117 aa7.32□□□□□ -1.24
NEDD9-205ENST00000459670 SDHAF1A6NFY7 115 aa7.32□□□□□ -1.24
NEDD9-205ENST00000459670 PPP1R17O96001 155 aa7.32□□□□□ -1.24
NEDD9-205ENST00000459670 EMP1P54849 157 aa7.32□□□□□ -1.24
NEDD9-205ENST00000459670 MRAPQ8TCY5 172 aa7.32□□□□□ -1.24
NEDD9-205ENST00000459670 DNAJC30Q96LL9 226 aa7.32□□□□□ -1.24
NEDD9-205ENST00000459670 NXT2Q9NPJ8 142 aaKnown RBP7.32□□□□□ -1.24
NEDD9-205ENST00000459670 TRGV2A0A075B6R0 118 aa7.31□□□□□ -1.24
NEDD9-205ENST00000459670 A0A0J9YWU9 116 aa7.31□□□□□ -1.24
NEDD9-205ENST00000459670 H7C1H1 209 aa7.31□□□□□ -1.24
NEDD9-205ENST00000459670 K7EMI3 77 aa7.31□□□□□ -1.24
NEDD9-205ENST00000459670 TSHBP01222 138 aa7.31□□□□□ -1.24
NEDD9-205ENST00000459670 LINC00614P0C842 121 aa7.31□□□□□ -1.24
NEDD9-205ENST00000459670 SPART-AS1P0CW21 52 aa7.31□□□□□ -1.24
NEDD9-205ENST00000459670 DEFB130BP0DP73 79 aa7.31□□□□□ -1.24
NEDD9-205ENST00000459670 DEFB130AP0DP74 79 aa7.31□□□□□ -1.24
NEDD9-205ENST00000459670 CRYBA4P53673 196 aa7.31□□□□□ -1.24
NEDD9-205ENST00000459670 UBE2D3P61077 147 aa7.31□□□□□ -1.24
NEDD9-205ENST00000459670 UBE2D2P62837 147 aa7.31□□□□□ -1.24
NEDD9-205ENST00000459670 BAGE3Q86Y29 109 aa7.31□□□□□ -1.24
NEDD9-205ENST00000459670 VSIG2Q96IQ7 327 aa7.31□□□□□ -1.24
NEDD9-205ENST00000459670 STARD9Q9P2P6 4700 aa7.3□□□□□ -1.24
NEDD9-205ENST00000459670 LOC100131303A0A0U1RQF7 123 aa7.3□□□□□ -1.24
NEDD9-205ENST00000459670 S100A6P06703 90 aa7.3□□□□□ -1.24
NEDD9-205ENST00000459670 PDZD11Q5EBL8 140 aa7.3□□□□□ -1.24
NEDD9-205ENST00000459670 AP5S1Q9NUS5 200 aa7.3□□□□□ -1.24
NEDD9-205ENST00000459670 PLECQ15149 4684 aaKnown RBP7.3□□□□□ -1.24
NEDD9-205ENST00000459670 LOC389332A0A1B0GUA5 103 aa7.29□□□□□ -1.24
NEDD9-205ENST00000459670 F5H697 171 aa7.29□□□□□ -1.24
NEDD9-205ENST00000459670 PMCHP20382 165 aa7.29□□□□□ -1.24
NEDD9-205ENST00000459670 DAD1P61803 113 aa7.29□□□□□ -1.24
NEDD9-205ENST00000459670 RHOHQ15669 191 aa7.29□□□□□ -1.24
NEDD9-205ENST00000459670 RNASEKQ6P5S7 137 aaKnown RBP7.29□□□□□ -1.24
NEDD9-205ENST00000459670 NEGR1Q7Z3B1 354 aa7.29□□□□□ -1.24
NEDD9-205ENST00000459670 ST20Q9HBF5 79 aa7.29□□□□□ -1.24
NEDD9-205ENST00000459670 TRBV7-3A0A075B6L6 115 aa7.28□□□□□ -1.24
NEDD9-205ENST00000459670 ATP5G1P05496 136 aa7.28□□□□□ -1.24
NEDD9-205ENST00000459670 DEFB121Q5J5C9 76 aa7.28□□□□□ -1.24
NEDD9-205ENST00000459670 Q6ZTC4 211 aa7.28□□□□□ -1.24
NEDD9-205ENST00000459670 FAM19A2Q8N3H0 131 aa7.28□□□□□ -1.24
NEDD9-205ENST00000459670 FAM104AQ969W3 186 aa7.28□□□□□ -1.24
NEDD9-205ENST00000459670 PRO0255Q9UI72 69 aa7.28□□□□□ -1.24
NEDD9-205ENST00000459670 DNAH1Q9P2D7 4330 aa7.28□□□□□ -1.24
NEDD9-205ENST00000459670 VCYO14598 125 aa7.27□□□□□ -1.25
NEDD9-205ENST00000459670 TCAPO15273 167 aa7.27□□□□□ -1.25
NEDD9-205ENST00000459670 HSBP1O75506 76 aa7.27□□□□□ -1.25
NEDD9-205ENST00000459670 FCER1GP30273 86 aa7.27□□□□□ -1.25
NEDD9-205ENST00000459670 PMCHL1Q16048 86 aa7.27□□□□□ -1.25
NEDD9-205ENST00000459670 NTM-AS1Q6ZSK4 140 aa7.27□□□□□ -1.25
NEDD9-205ENST00000459670 LINC00173Q6ZV60 143 aa7.27□□□□□ -1.25
NEDD9-205ENST00000459670 FA2HQ7L5A8 372 aa7.27□□□□□ -1.25
NEDD9-205ENST00000459670 Q8N976 141 aa7.27□□□□□ -1.25
NEDD9-205ENST00000459670 PRSS3P2Q8NHM4 247 aa7.27□□□□□ -1.25
NEDD9-205ENST00000459670 CHCHD7Q9BUK0 85 aa7.27□□□□□ -1.25
NEDD9-205ENST00000459670 TRGV4A0A0C4DH28 118 aa7.26□□□□□ -1.25
NEDD9-205ENST00000459670 H3BNG1 76 aa7.26□□□□□ -1.25
NEDD9-205ENST00000459670 I3L3M4 83 aa7.26□□□□□ -1.25
NEDD9-205ENST00000459670 HBDP02042 147 aa7.26□□□□□ -1.25
NEDD9-205ENST00000459670 AMTP48728 403 aa7.26□□□□□ -1.25
NEDD9-205ENST00000459670 DEFA6Q01524 100 aa7.26□□□□□ -1.25
NEDD9-205ENST00000459670 LAGE3Q14657 143 aa7.26□□□□□ -1.25
NEDD9-205ENST00000459670 HHLA3Q9XRX5 114 aa7.26□□□□□ -1.25
NEDD9-205ENST00000459670 FABP4P15090 132 aa7.25□□□□□ -1.25
NEDD9-205ENST00000459670 NANOS2P60321 138 aaKnown RBP7.25□□□□□ -1.25
NEDD9-205ENST00000459670 RPL36AP83881 106 aaKnown RBP7.25□□□□□ -1.25
NEDD9-205ENST00000459670 ORMDL2Q53FV1 153 aa7.25□□□□□ -1.25
NEDD9-205ENST00000459670 ZNRF2Q8NHG8 242 aa7.25□□□□□ -1.25
NEDD9-205ENST00000459670 RPL36ALQ969Q0 106 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms