RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 FAM222AQ5U5X8 452 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 CFAP126Q5VTH2 177 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 DGAT2L7PQ6IED9 249 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 Q6ZTI0 123 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 Q8N8P6 123 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 MAP1LC3CQ9BXW4 147 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 HHLA3Q9XRX5 114 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 U3KQK5 164 aa4.22□□□□□ -1.73
RNU1-88P-201ENST00000459274 TRBV7-3A0A075B6L6 115 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 TRAV26-2A0A0B4J265 109 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 IGHV4-28A0A0C4DH34 117 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 TRBV6-4A0A1B0GX49 114 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 SDHAF1A6NFY7 115 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 F5H768 121 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 SMKR1H3BMG3 65 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 K7EQD1 137 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 PAX4O43316 350 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 ATP5LO75964 103 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 NPYP01303 97 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 IGHV3-53P01767 116 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 HBDP02042 147 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 CRYGDP07320 174 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 NHLRC4P0CG21 123 aaPredicted RBP4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 HTN3P15516 51 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 COA6Q5JTJ3 125 aaKnown RBP4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 SUMO4Q6EEV6 95 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 Q6ZN92 141 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 DAZ4Q86SG3 579 aaKnown RBP4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 RNF185Q96GF1 192 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 PACRGQ96M98 296 aaPredicted RBP4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 SMIM2Q9BVW6 85 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 JPT2Q9H910 190 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 DAZ3Q9NR90 486 aaKnown RBP4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 PRO0255Q9UI72 69 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 NOTCH3Q9UM47 2321 aa4.21□□□□□ -1.74
RNU1-88P-201ENST00000459274 PRSS47A8MTI9 375 aa4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 HSBP1L1C9JCN9 74 aa4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 SCGB1D1O95968 90 aa4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 PRM2P04554 102 aa4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 PRSS1P07477 247 aa4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 GIG44P09565 113 aaPredicted RBP4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 KRTDAPP60985 99 aa4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 RPL32P62910 135 aaKnown RBP4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 MRPL23Q16540 153 aaKnown RBP4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 IQCJQ1A5X6 159 aa4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 KPRPQ5T749 579 aaPredicted RBP4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 AMMECR1LQ6DCA0 310 aa4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 ZNRF2Q8NHG8 242 aa4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 IL17DQ8TAD2 202 aa4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 C11orf45Q8TAV5 145 aa4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 TMEM101Q96IK0 257 aa4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 CYSLTR1Q9Y271 337 aa4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 X6R8D5 127 aa4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 ATRQ13535 2644 aa4.2□□□□□ -1.74
RNU1-88P-201ENST00000459274 TRBV25-1A0A075B6N4 114 aa4.19□□□□□ -1.74
RNU1-88P-201ENST00000459274 TRBV6-5A0A0K0K1A5 114 aa4.19□□□□□ -1.74
RNU1-88P-201ENST00000459274 M0QY20 66 aa4.19□□□□□ -1.74
RNU1-88P-201ENST00000459274 DEFB4AO15263 64 aa4.19□□□□□ -1.74
RNU1-88P-201ENST00000459274 ESDP10768 282 aa4.19□□□□□ -1.74
RNU1-88P-201ENST00000459274 PKIAP61925 76 aa4.19□□□□□ -1.74
RNU1-88P-201ENST00000459274 HIST3H2BBQ8N257 126 aa4.19□□□□□ -1.74
RNU1-88P-201ENST00000459274 FAM19A2Q8N3H0 131 aa4.19□□□□□ -1.74
RNU1-88P-201ENST00000459274 POM121L12Q8N7R1 296 aa4.19□□□□□ -1.74
RNU1-88P-201ENST00000459274 OR10D4PQ8NGN7 298 aa4.19□□□□□ -1.74
RNU1-88P-201ENST00000459274 RPL39LQ96EH5 51 aaKnown RBP4.19□□□□□ -1.74
RNU1-88P-201ENST00000459274 ZNF479Q96JC4 524 aa4.19□□□□□ -1.74
RNU1-88P-201ENST00000459274 C18orf15Q96N68 181 aa4.19□□□□□ -1.74
RNU1-88P-201ENST00000459274 SCGB3A1Q96QR1 104 aa4.19□□□□□ -1.74
RNU1-88P-201ENST00000459274 TMEM70Q9BUB7 260 aa4.19□□□□□ -1.74
RNU1-88P-201ENST00000459274 C11orf68Q9H3H3 251 aaKnown RBP4.19□□□□□ -1.74
RNU1-88P-201ENST00000459274 EDA2RQ9HAV5 297 aa4.19□□□□□ -1.74
RNU1-88P-201ENST00000459274 DKK2Q9UBU2 259 aa4.19□□□□□ -1.74
RNU1-88P-201ENST00000459274 KIF25-AS1Q9Y6Z4 181 aa4.19□□□□□ -1.74
RNU1-88P-201ENST00000459274 NBPF19A0A087WUL8 3843 aa4.18□□□□□ -1.74
RNU1-88P-201ENST00000459274 TRBV27A0A0K0K1C4 114 aa4.18□□□□□ -1.74
RNU1-88P-201ENST00000459274 GAGE12JA6NER3 117 aa4.18□□□□□ -1.74
RNU1-88P-201ENST00000459274 H0Y8G0 127 aa4.18□□□□□ -1.74
RNU1-88P-201ENST00000459274 PRB2P02812 416 aaPredicted RBP4.18□□□□□ -1.74
RNU1-88P-201ENST00000459274 GAGE1Q13065 139 aa4.18□□□□□ -1.74
RNU1-88P-201ENST00000459274 GAGE4Q13068 117 aa4.18□□□□□ -1.74
RNU1-88P-201ENST00000459274 GAGE5Q13069 117 aa4.18□□□□□ -1.74
RNU1-88P-201ENST00000459274 PMCHL1Q16048 86 aa4.18□□□□□ -1.74
RNU1-88P-201ENST00000459274 GAGE13Q4V321 117 aa4.18□□□□□ -1.74
RNU1-88P-201ENST00000459274 ZNF575Q86XF7 245 aa4.18□□□□□ -1.74
RNU1-88P-201ENST00000459274 SBSPONQ8IVN8 264 aa4.18□□□□□ -1.74
RNU1-88P-201ENST00000459274 SLC25A29Q8N8R3 303 aa4.18□□□□□ -1.74
RNU1-88P-201ENST00000459274 ATP6V0E2Q8NHE4 81 aa4.18□□□□□ -1.74
RNU1-88P-201ENST00000459274 HIST1H2BLQ99880 126 aa4.18□□□□□ -1.74
RNU1-88P-201ENST00000459274 ICOSQ9Y6W8 199 aa4.18□□□□□ -1.74
RNU1-88P-201ENST00000459274 NF1P21359 2839 aa4.17□□□□□ -1.74
RNU1-88P-201ENST00000459274 TRAV8-6A0A0B4J262 113 aa4.17□□□□□ -1.74
RNU1-88P-201ENST00000459274 IGHV1-24A0A0C4DH33 117 aa4.17□□□□□ -1.74
RNU1-88P-201ENST00000459274 A0A0J9YWU9 116 aa4.17□□□□□ -1.74
RNU1-88P-201ENST00000459274 H7C423 109 aa4.17□□□□□ -1.74
RNU1-88P-201ENST00000459274 K7EIL1 84 aa4.17□□□□□ -1.74
RNU1-88P-201ENST00000459274 GYPEP15421 78 aa4.17□□□□□ -1.74
RNU1-88P-201ENST00000459274 GATA1P15976 413 aaPredicted RBP4.17□□□□□ -1.74
RNU1-88P-201ENST00000459274 C2orf66Q6UXQ4 117 aa4.17□□□□□ -1.74
RNU1-88P-201ENST00000459274 NEGR1Q7Z3B1 354 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms