RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.85□□□□□ -0.99
SYNE2-207ENST00000458046 TRBV12-3P01733 135 aa8.85□□□□□ -0.99
SYNE2-207ENST00000458046 LINC00482Q8N8I6 264 aa8.85□□□□□ -0.99
SYNE2-207ENST00000458046 SYT8Q8NBV8 401 aa8.85□□□□□ -0.99
SYNE2-207ENST00000458046 TRAV41A0A0B4J266 112 aa8.85□□□□□ -0.99
SYNE2-207ENST00000458046 TRAV40A0A0B4J280 105 aa8.85□□□□□ -0.99
SYNE2-207ENST00000458046 ZC2HC1BQ5TFG8 222 aa8.85□□□□□ -0.99
SYNE2-207ENST00000458046 UNQ9165/PRO28630Q6UXU0 137 aa8.85□□□□□ -0.99
SYNE2-207ENST00000458046 C9orf47Q6ZRZ4 202 aa8.85□□□□□ -0.99
SYNE2-207ENST00000458046 NRACQ8N912 160 aa8.85□□□□□ -0.99
SYNE2-207ENST00000458046 IGKV3-7A0A075B6H7 116 aa8.84□□□□□ -0.99
SYNE2-207ENST00000458046 KLK9Q2XQG4 91 aa8.84□□□□□ -0.99
SYNE2-207ENST00000458046 Q5XG85 94 aa8.84□□□□□ -0.99
SYNE2-207ENST00000458046 MRPL35Q9NZE8 188 aaKnown RBP8.84□□□□□ -0.99
SYNE2-207ENST00000458046 KLK9Q9UKQ9 250 aa8.84□□□□□ -0.99
SYNE2-207ENST00000458046 K7EMI3 77 aa8.84□□□□□ -0.99
SYNE2-207ENST00000458046 MYOZ3Q8TDC0 251 aa8.84□□□□□ -0.99
SYNE2-207ENST00000458046 C19orf84I3L1E1 186 aa8.83□□□□□ -1
SYNE2-207ENST00000458046 DPM2O94777 84 aa8.83□□□□□ -1
SYNE2-207ENST00000458046 TM2D2Q9BX73 214 aa8.83□□□□□ -1
SYNE2-207ENST00000458046 M0R381 172 aa8.83□□□□□ -1
SYNE2-207ENST00000458046 IGHV3-11P01762 117 aa8.83□□□□□ -1
SYNE2-207ENST00000458046 FXYD2P54710 66 aa8.83□□□□□ -1
SYNE2-207ENST00000458046 LY6EQ16553 131 aa8.83□□□□□ -1
SYNE2-207ENST00000458046 GTF2H5Q6ZYL4 71 aa8.83□□□□□ -1
SYNE2-207ENST00000458046 KLK15Q9H2R5 256 aa8.83□□□□□ -1
SYNE2-207ENST00000458046 CCDC179H3BU77 68 aa8.82□□□□□ -1
SYNE2-207ENST00000458046 NHLRC4P0CG21 123 aaPredicted RBP8.82□□□□□ -1
SYNE2-207ENST00000458046 UFSP1Q6NVU6 142 aa8.82□□□□□ -1
SYNE2-207ENST00000458046 PRADC1Q9BSG0 188 aa8.82□□□□□ -1
SYNE2-207ENST00000458046 MOB4Q9Y3A3 225 aa8.82□□□□□ -1
SYNE2-207ENST00000458046 TRBV25-1A0A075B6N4 114 aa8.81□□□□□ -1
SYNE2-207ENST00000458046 K7ERJ3 54 aa8.81□□□□□ -1
SYNE2-207ENST00000458046 LCNL1Q6ZST4 164 aa8.81□□□□□ -1
SYNE2-207ENST00000458046 CHAC1Q9BUX1 264 aa8.81□□□□□ -1
SYNE2-207ENST00000458046 JPT2Q9H910 190 aa8.81□□□□□ -1
SYNE2-207ENST00000458046 SETD2Q9BYW2 2564 aaPredicted RBP8.81□□□□□ -1
SYNE2-207ENST00000458046 K7EP34 96 aa8.81□□□□□ -1
SYNE2-207ENST00000458046 SMIM13P0DJ93 91 aa8.81□□□□□ -1
SYNE2-207ENST00000458046 GPHB5Q86YW7 130 aa8.81□□□□□ -1
SYNE2-207ENST00000458046 MAPKAPK5-AS1Q8N8E1 139 aa8.81□□□□□ -1
SYNE2-207ENST00000458046 A0A1W2PPM0 123 aa8.8□□□□□ -1
SYNE2-207ENST00000458046 RBMY1CP0DJD4 496 aa8.8□□□□□ -1
SYNE2-207ENST00000458046 S100A4P26447 101 aaKnown RBP8.8□□□□□ -1
SYNE2-207ENST00000458046 ITLN2Q8WWU7 325 aaPredicted RBP8.8□□□□□ -1
SYNE2-207ENST00000458046 C9orf85Q96MD7 179 aa8.8□□□□□ -1
SYNE2-207ENST00000458046 CELSR2Q9HCU4 2923 aa8.8□□□□□ -1
SYNE2-207ENST00000458046 LRRK2Q5S007 2527 aa8.8□□□□□ -1
SYNE2-207ENST00000458046 LYRM9A8MSI8 78 aa8.8□□□□□ -1
SYNE2-207ENST00000458046 IGHV4-39P01824 125 aa8.8□□□□□ -1
SYNE2-207ENST00000458046 LGALS1P09382 135 aaKnown RBP8.8□□□□□ -1
SYNE2-207ENST00000458046 C14orf178Q8N769 122 aaPredicted RBP8.8□□□□□ -1
SYNE2-207ENST00000458046 SPCS1Q9Y6A9 102 aa8.8□□□□□ -1
SYNE2-207ENST00000458046 IGHV4-4A0A075B6R2 117 aa8.79□□□□□ -1
SYNE2-207ENST00000458046 FAM223BA6NKX1 122 aa8.79□□□□□ -1
SYNE2-207ENST00000458046 C8orf87E5RJ46 101 aa8.79□□□□□ -1
SYNE2-207ENST00000458046 RNASE4P34096 147 aaKnown RBP8.79□□□□□ -1
SYNE2-207ENST00000458046 FAM223AQ8IWN6 122 aa8.79□□□□□ -1
SYNE2-207ENST00000458046 ZFAND2AQ8N6M9 145 aa8.79□□□□□ -1
SYNE2-207ENST00000458046 OR10J6PQ8NGY7 276 aa8.79□□□□□ -1
SYNE2-207ENST00000458046 RPL39LQ96EH5 51 aaKnown RBP8.79□□□□□ -1
SYNE2-207ENST00000458046 IGHV1-69DA0A0B4J2H0 117 aa8.79□□□□□ -1
SYNE2-207ENST00000458046 GNRH2O43555 120 aa8.79□□□□□ -1
SYNE2-207ENST00000458046 IGHV1-69P01742 117 aa8.79□□□□□ -1
SYNE2-207ENST00000458046 DEFB104AQ8WTQ1 72 aa8.79□□□□□ -1
SYNE2-207ENST00000458046 OTOGQ6ZRI0 2925 aa8.79□□□□□ -1
SYNE2-207ENST00000458046 ITPR2Q14571 2701 aa8.78□□□□□ -1
SYNE2-207ENST00000458046 IGHV4-38-2P0DP08 117 aa8.78□□□□□ -1
SYNE2-207ENST00000458046 OR5A1Q8NGJ0 315 aa8.78□□□□□ -1
SYNE2-207ENST00000458046 NHP2Q9NX24 153 aaKnown RBP8.78□□□□□ -1
SYNE2-207ENST00000458046 PHLDA3Q9Y5J5 127 aa8.78□□□□□ -1
SYNE2-207ENST00000458046 MGPP08493 103 aa8.78□□□□□ -1
SYNE2-207ENST00000458046 BLCAPP62952 87 aa8.78□□□□□ -1
SYNE2-207ENST00000458046 SMIM2Q9BVW6 85 aa8.78□□□□□ -1
SYNE2-207ENST00000458046 HIGD1BQ9P298 99 aa8.78□□□□□ -1
SYNE2-207ENST00000458046 CRYBG3Q68DQ2 2970 aa8.78□□□□□ -1
SYNE2-207ENST00000458046 TRAV21A0A0B4J279 112 aa8.77□□□□□ -1
SYNE2-207ENST00000458046 IGHV4-61A0A0C4DH41 118 aa8.77□□□□□ -1
SYNE2-207ENST00000458046 ATP5G1P05496 136 aa8.77□□□□□ -1
SYNE2-207ENST00000458046 FABP2P12104 132 aa8.77□□□□□ -1
SYNE2-207ENST00000458046 FAM19A4Q96LR4 140 aa8.77□□□□□ -1
SYNE2-207ENST00000458046 GNLYP22749 145 aa8.77□□□□□ -1.01
SYNE2-207ENST00000458046 PSMG4Q5JS54 123 aa8.77□□□□□ -1.01
SYNE2-207ENST00000458046 SCGB3A1Q96QR1 104 aa8.77□□□□□ -1.01
SYNE2-207ENST00000458046 H3BUX3 64 aa8.77□□□□□ -1.01
SYNE2-207ENST00000458046 NDUFA4O00483 81 aa8.77□□□□□ -1.01
SYNE2-207ENST00000458046 ASIPP42127 132 aa8.77□□□□□ -1.01
SYNE2-207ENST00000458046 CEND1Q8N111 149 aa8.77□□□□□ -1.01
SYNE2-207ENST00000458046 PLEKHB2Q96CS7 222 aa8.77□□□□□ -1.01
SYNE2-207ENST00000458046 SOCS3O14543 225 aa8.76□□□□□ -1.01
SYNE2-207ENST00000458046 OVOL1O14753 267 aa8.76□□□□□ -1.01
SYNE2-207ENST00000458046 LENEPQ9Y5L5 61 aa8.76□□□□□ -1.01
SYNE2-207ENST00000458046 CSMD2Q7Z408 3487 aa8.76□□□□□ -1.01
SYNE2-207ENST00000458046 ESM1Q9NQ30 184 aa8.76□□□□□ -1.01
SYNE2-207ENST00000458046 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.75□□□□□ -1.01
SYNE2-207ENST00000458046 RHPN1-AS1Q9BWJ2 59 aa8.75□□□□□ -1.01
SYNE2-207ENST00000458046 DPH3P1Q9H4G8 78 aa8.75□□□□□ -1.01
SYNE2-207ENST00000458046 SPANXCQ9NY87 97 aa8.75□□□□□ -1.01
SYNE2-207ENST00000458046 PLNP26678 52 aa8.74□□□□□ -1.01
SYNE2-207ENST00000458046 ORMDL2Q53FV1 153 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms