RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 YAE1D1Q9NRH1 226 aa12.22□□□□□ -0.45
CCDC43-202ENST00000457422 MAPKAPK5-AS1Q8N8E1 139 aa12.22□□□□□ -0.45
CCDC43-202ENST00000457422 PTH2Q96A98 100 aa12.22□□□□□ -0.45
CCDC43-202ENST00000457422 TRAV8-6A0A0B4J262 113 aa12.21□□□□□ -0.45
CCDC43-202ENST00000457422 OR11H12B2RN74 326 aa12.2□□□□□ -0.46
CCDC43-202ENST00000457422 E9PLD3 99 aa12.2□□□□□ -0.46
CCDC43-202ENST00000457422 PRM2P04554 102 aa12.2□□□□□ -0.46
CCDC43-202ENST00000457422 RPL39P62891 51 aaKnown RBP12.2□□□□□ -0.46
CCDC43-202ENST00000457422 PMVKQ15126 192 aa12.2□□□□□ -0.46
CCDC43-202ENST00000457422 OR11H2Q8NH07 326 aa12.2□□□□□ -0.46
CCDC43-202ENST00000457422 C9orf118A6NHY6 69 aa12.2□□□□□ -0.46
CCDC43-202ENST00000457422 ZNF415Q09FC8 603 aa12.2□□□□□ -0.46
CCDC43-202ENST00000457422 PAPPA-AS1Q5QFB9 102 aa12.2□□□□□ -0.46
CCDC43-202ENST00000457422 M0R2P5 195 aa12.19□□□□□ -0.46
CCDC43-202ENST00000457422 RNASE1P07998 156 aaKnown RBP12.19□□□□□ -0.46
CCDC43-202ENST00000457422 TAL2Q16559 108 aa12.19□□□□□ -0.46
CCDC43-202ENST00000457422 AMMECR1LQ6DCA0 310 aa12.19□□□□□ -0.46
CCDC43-202ENST00000457422 UFSP1Q6NVU6 142 aa12.19□□□□□ -0.46
CCDC43-202ENST00000457422 TM2D2Q9BX73 214 aa12.19□□□□□ -0.46
CCDC43-202ENST00000457422 C16orf95Q9H693 158 aa12.19□□□□□ -0.46
CCDC43-202ENST00000457422 KMT2BQ9UMN6 2715 aaPredicted RBP12.19□□□□□ -0.46
CCDC43-202ENST00000457422 IGLV4-69A0A075B6H9 119 aa12.18□□□□□ -0.46
CCDC43-202ENST00000457422 A8MWV9 139 aa12.18□□□□□ -0.46
CCDC43-202ENST00000457422 CCL24O00175 119 aa12.18□□□□□ -0.46
CCDC43-202ENST00000457422 NF1P21359 2839 aa12.18□□□□□ -0.46
CCDC43-202ENST00000457422 I3L3M4 83 aa12.18□□□□□ -0.46
CCDC43-202ENST00000457422 INSP01308 110 aa12.18□□□□□ -0.46
CCDC43-202ENST00000457422 FXYD2P54710 66 aa12.18□□□□□ -0.46
CCDC43-202ENST00000457422 ODF3L2Q3SX64 289 aa12.18□□□□□ -0.46
CCDC43-202ENST00000457422 OR4C5Q8NGB2 326 aa12.18□□□□□ -0.46
CCDC43-202ENST00000457422 CST9LQ9H4G1 147 aa12.18□□□□□ -0.46
CCDC43-202ENST00000457422 CUBNO60494 3623 aa12.17□□□□□ -0.46
CCDC43-202ENST00000457422 GCSHP23434 173 aa12.17□□□□□ -0.46
CCDC43-202ENST00000457422 CEND1Q8N111 149 aa12.17□□□□□ -0.46
CCDC43-202ENST00000457422 CITED2Q99967 270 aaPredicted RBP12.17□□□□□ -0.46
CCDC43-202ENST00000457422 MYMXA0A1B0GTQ4 84 aa12.17□□□□□ -0.46
CCDC43-202ENST00000457422 C11orf72Q8NBR9 251 aa12.17□□□□□ -0.46
CCDC43-202ENST00000457422 TSSC4Q9Y5U2 329 aaPredicted RBP12.17□□□□□ -0.46
CCDC43-202ENST00000457422 NACAE9PAV3 2078 aa12.16□□□□□ -0.46
CCDC43-202ENST00000457422 ACANP16112 2415 aa12.16□□□□□ -0.46
CCDC43-202ENST00000457422 IGHV3-73A0A0B4J1V6 119 aa12.16□□□□□ -0.46
CCDC43-202ENST00000457422 C11orf86A6NJI1 115 aa12.16□□□□□ -0.46
CCDC43-202ENST00000457422 P0DMU3 169 aa12.16□□□□□ -0.46
CCDC43-202ENST00000457422 FAM231AP0DMU4 169 aa12.16□□□□□ -0.46
CCDC43-202ENST00000457422 FAM231CP0DMU5 169 aa12.16□□□□□ -0.46
CCDC43-202ENST00000457422 LINC01006Q8NI28 216 aa12.16□□□□□ -0.46
CCDC43-202ENST00000457422 C20orf203Q8NBC4 194 aa12.15□□□□□ -0.46
CCDC43-202ENST00000457422 LINC01587Q99440 93 aa12.15□□□□□ -0.46
CCDC43-202ENST00000457422 PRADC1Q9BSG0 188 aa12.15□□□□□ -0.46
CCDC43-202ENST00000457422 SPXQ9BT56 116 aa12.15□□□□□ -0.46
CCDC43-202ENST00000457422 ITPR2Q14571 2701 aa12.15□□□□□ -0.46
CCDC43-202ENST00000457422 K7EP13 123 aa12.15□□□□□ -0.46
CCDC43-202ENST00000457422 SCGB2A2Q13296 93 aa12.15□□□□□ -0.46
CCDC43-202ENST00000457422 HELZ2Q9BYK8 2649 aaKnown RBP12.15□□□□□ -0.46
CCDC43-202ENST00000457422 SMIM13P0DJ93 91 aa12.14□□□□□ -0.47
CCDC43-202ENST00000457422 PROK1P58294 105 aa12.14□□□□□ -0.47
CCDC43-202ENST00000457422 EMP1P54849 157 aa12.14□□□□□ -0.47
CCDC43-202ENST00000457422 BEAN1Q3B7T3 259 aa12.14□□□□□ -0.47
CCDC43-202ENST00000457422 H3BUT2 72 aa12.13□□□□□ -0.47
CCDC43-202ENST00000457422 HERVK_113P61574 105 aa12.13□□□□□ -0.47
CCDC43-202ENST00000457422 CFAP126Q5VTH2 177 aa12.13□□□□□ -0.47
CCDC43-202ENST00000457422 TRBV7-3A0A075B6L6 115 aa12.12□□□□□ -0.47
CCDC43-202ENST00000457422 RHODO00212 210 aa12.12□□□□□ -0.47
CCDC43-202ENST00000457422 STHQ8IWL8 128 aa12.12□□□□□ -0.47
CCDC43-202ENST00000457422 RAB37Q96AX2 223 aa12.12□□□□□ -0.47
CCDC43-202ENST00000457422 UNC79Q9P2D8 2635 aa12.12□□□□□ -0.47
CCDC43-202ENST00000457422 WNK1Q9H4A3 2382 aa12.12□□□□□ -0.47
CCDC43-202ENST00000457422 NFE4Q86UQ8 179 aa12.12□□□□□ -0.47
CCDC43-202ENST00000457422 PHLDA1Q8WV24 401 aaPredicted RBP12.12□□□□□ -0.47
CCDC43-202ENST00000457422 ZNRF2Q8NHG8 242 aa12.11□□□□□ -0.47
CCDC43-202ENST00000457422 NAA38Q9BRA0 125 aaKnown RBP12.11□□□□□ -0.47
CCDC43-202ENST00000457422 XCL2Q9UBD3 114 aa12.11□□□□□ -0.47
CCDC43-202ENST00000457422 GAGE10A6NGK3 116 aa12.1□□□□□ -0.47
CCDC43-202ENST00000457422 GTF2H5Q6ZYL4 71 aa12.1□□□□□ -0.47
CCDC43-202ENST00000457422 HIST1H4GQ99525 98 aa12.1□□□□□ -0.47
CCDC43-202ENST00000457422 OPRPNQ99935 248 aaPredicted RBP12.1□□□□□ -0.47
CCDC43-202ENST00000457422 MRPL16Q9NX20 251 aaKnown RBP12.1□□□□□ -0.47
CCDC43-202ENST00000457422 MTORP42345 2549 aa12.1□□□□□ -0.47
CCDC43-202ENST00000457422 A0A1W2PPM0 123 aa12.1□□□□□ -0.47
CCDC43-202ENST00000457422 ZNF815PA8K554 130 aa12.1□□□□□ -0.47
CCDC43-202ENST00000457422 Q6ZSN1 163 aa12.1□□□□□ -0.47
CCDC43-202ENST00000457422 PYGO1Q9Y3Y4 419 aa12.1□□□□□ -0.47
CCDC43-202ENST00000457422 TNFRSF18Q9Y5U5 241 aa12.1□□□□□ -0.47
CCDC43-202ENST00000457422 K7EP34 96 aa12.09□□□□□ -0.47
CCDC43-202ENST00000457422 RS1O15537 224 aa12.09□□□□□ -0.47
CCDC43-202ENST00000457422 HILS1P60008 231 aa12.09□□□□□ -0.47
CCDC43-202ENST00000457422 IL17DQ8TAD2 202 aa12.09□□□□□ -0.47
CCDC43-202ENST00000457422 ZNF418Q8TF45 676 aaPredicted RBP12.09□□□□□ -0.47
CCDC43-202ENST00000457422 NHP2Q9NX24 153 aaKnown RBP12.09□□□□□ -0.47
CCDC43-202ENST00000457422 IGLV4-3A0A075B6K6 122 aa12.09□□□□□ -0.47
CCDC43-202ENST00000457422 K7ERJ3 54 aa12.09□□□□□ -0.47
CCDC43-202ENST00000457422 IGHV3-53P01767 116 aa12.09□□□□□ -0.47
CCDC43-202ENST00000457422 CMC4P56277 68 aaPredicted RBP12.09□□□□□ -0.47
CCDC43-202ENST00000457422 C1orf158Q8N1D5 194 aa12.09□□□□□ -0.47
CCDC43-202ENST00000457422 SETD2Q9BYW2 2564 aaPredicted RBP12.08□□□□□ -0.48
CCDC43-202ENST00000457422 DNAJC30Q96LL9 226 aa12.08□□□□□ -0.48
CCDC43-202ENST00000457422 AZU1P20160 251 aa12.07□□□□□ -0.48
CCDC43-202ENST00000457422 CRYBA4P53673 196 aa12.07□□□□□ -0.48
CCDC43-202ENST00000457422 TMEM170BQ5T4T1 132 aa12.07□□□□□ -0.48
CCDC43-202ENST00000457422 Q9UF83 564 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms