RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 SMIM17P0DL12 118 aa6.89□□□□□ -1.31
ATG4A-206ENST00000457035 ADCYAP1P18509 176 aa6.89□□□□□ -1.31
ATG4A-206ENST00000457035 TIRAPP58753 221 aa6.89□□□□□ -1.31
ATG4A-206ENST00000457035 PNRC1Q12796 327 aaPredicted RBP6.89□□□□□ -1.31
ATG4A-206ENST00000457035 GAGE1Q13065 139 aa6.89□□□□□ -1.31
ATG4A-206ENST00000457035 GAGE4Q13068 117 aa6.89□□□□□ -1.31
ATG4A-206ENST00000457035 GAGE5Q13069 117 aa6.89□□□□□ -1.31
ATG4A-206ENST00000457035 GAGE13Q4V321 117 aa6.89□□□□□ -1.31
ATG4A-206ENST00000457035 Q6ZR54 194 aa6.89□□□□□ -1.31
ATG4A-206ENST00000457035 NUP35Q8NFH5 326 aa6.89□□□□□ -1.31
ATG4A-206ENST00000457035 ATP6V0E2Q8NHE4 81 aa6.89□□□□□ -1.31
ATG4A-206ENST00000457035 IGLV2-18A0A075B6J9 118 aa6.88□□□□□ -1.31
ATG4A-206ENST00000457035 A0A1B0GUT8 65 aa6.88□□□□□ -1.31
ATG4A-206ENST00000457035 F5H697 171 aa6.88□□□□□ -1.31
ATG4A-206ENST00000457035 M0QY20 66 aa6.88□□□□□ -1.31
ATG4A-206ENST00000457035 ZNF56Q15929 161 aa6.88□□□□□ -1.31
ATG4A-206ENST00000457035 NEXN-AS1Q8NBZ9 246 aa6.88□□□□□ -1.31
ATG4A-206ENST00000457035 GTSF1LQ9H1H1 148 aa6.88□□□□□ -1.31
ATG4A-206ENST00000457035 DPH3P1Q9H4G8 78 aa6.88□□□□□ -1.31
ATG4A-206ENST00000457035 TRBV7-3A0A075B6L6 115 aa6.87□□□□□ -1.31
ATG4A-206ENST00000457035 F8W036 122 aa6.87□□□□□ -1.31
ATG4A-206ENST00000457035 M0R2N4 97 aa6.87□□□□□ -1.31
ATG4A-206ENST00000457035 UBE2D3P61077 147 aa6.87□□□□□ -1.31
ATG4A-206ENST00000457035 UBE2D2P62837 147 aa6.87□□□□□ -1.31
ATG4A-206ENST00000457035 C10orf91Q5T1B1 145 aa6.87□□□□□ -1.31
ATG4A-206ENST00000457035 SEC11CQ9BY50 192 aa6.87□□□□□ -1.31
ATG4A-206ENST00000457035 NAT8BQ9UHF3 227 aa6.87□□□□□ -1.31
ATG4A-206ENST00000457035 FAT2Q9NYQ8 4349 aa6.87□□□□□ -1.31
ATG4A-206ENST00000457035 NBDYA0A0U1RRE5 68 aa6.86□□□□□ -1.31
ATG4A-206ENST00000457035 PPP1R2P9O14990 202 aa6.86□□□□□ -1.31
ATG4A-206ENST00000457035 MGPP08493 103 aa6.86□□□□□ -1.31
ATG4A-206ENST00000457035 RPL36AP83881 106 aaKnown RBP6.86□□□□□ -1.31
ATG4A-206ENST00000457035 LCE3BQ5TA77 95 aa6.86□□□□□ -1.31
ATG4A-206ENST00000457035 SUMO4Q6EEV6 95 aa6.86□□□□□ -1.31
ATG4A-206ENST00000457035 RPL36ALQ969Q0 106 aaKnown RBP6.86□□□□□ -1.31
ATG4A-206ENST00000457035 ANAPC16Q96DE5 110 aa6.86□□□□□ -1.31
ATG4A-206ENST00000457035 SIVA1O15304 175 aa6.85□□□□□ -1.31
ATG4A-206ENST00000457035 MT-ND4LP03901 98 aa6.85□□□□□ -1.31
ATG4A-206ENST00000457035 RIGQ13278 110 aa6.85□□□□□ -1.31
ATG4A-206ENST00000457035 LELP1Q5T871 98 aa6.85□□□□□ -1.31
ATG4A-206ENST00000457035 SMIM15Q7Z3B0 74 aa6.85□□□□□ -1.31
ATG4A-206ENST00000457035 WFDC10BQ8IUB3 73 aa6.85□□□□□ -1.31
ATG4A-206ENST00000457035 GATD1Q8NB37 220 aa6.85□□□□□ -1.31
ATG4A-206ENST00000457035 BORCS7Q96B45 105 aa6.85□□□□□ -1.31
ATG4A-206ENST00000457035 TMEM191AQ9H0A3 160 aa6.85□□□□□ -1.31
ATG4A-206ENST00000457035 H7C1H1 209 aa6.84□□□□□ -1.31
ATG4A-206ENST00000457035 RASL11AQ6T310 242 aa6.84□□□□□ -1.31
ATG4A-206ENST00000457035 RNF185Q96GF1 192 aa6.84□□□□□ -1.31
ATG4A-206ENST00000457035 DNAJC30Q96LL9 226 aa6.84□□□□□ -1.31
ATG4A-206ENST00000457035 KRTAP1-5Q9BYS1 174 aa6.84□□□□□ -1.31
ATG4A-206ENST00000457035 NIT2Q9NQR4 276 aa6.84□□□□□ -1.31
ATG4A-206ENST00000457035 A0A087WWC5 75 aa6.83□□□□□ -1.32
ATG4A-206ENST00000457035 TRAV8-6A0A0B4J262 113 aa6.83□□□□□ -1.32
ATG4A-206ENST00000457035 TRAV26-2A0A0B4J265 109 aa6.83□□□□□ -1.32
ATG4A-206ENST00000457035 DNAH10OSP0CZ25 163 aa6.83□□□□□ -1.32
ATG4A-206ENST00000457035 RAB4AP20338 218 aa6.83□□□□□ -1.32
ATG4A-206ENST00000457035 FRZBQ92765 325 aa6.83□□□□□ -1.32
ATG4A-206ENST00000457035 CARHSP1Q9Y2V2 147 aaKnown RBP6.83□□□□□ -1.32
ATG4A-206ENST00000457035 TNFRSF18Q9Y5U5 241 aa6.83□□□□□ -1.32
ATG4A-206ENST00000457035 IGHV3-38A0A0C4DH36 116 aa6.82□□□□□ -1.32
ATG4A-206ENST00000457035 A0A1B0GW15 77 aa6.82□□□□□ -1.32
ATG4A-206ENST00000457035 A0A1B0GXF2 115 aa6.82□□□□□ -1.32
ATG4A-206ENST00000457035 GAS8-AS1O95177 125 aa6.82□□□□□ -1.32
ATG4A-206ENST00000457035 OR10J3Q5JRS4 329 aa6.82□□□□□ -1.32
ATG4A-206ENST00000457035 NTM-AS1Q6ZSK4 140 aa6.82□□□□□ -1.32
ATG4A-206ENST00000457035 DAZ4Q86SG3 579 aaKnown RBP6.82□□□□□ -1.32
ATG4A-206ENST00000457035 AMN1Q8IY45 258 aa6.82□□□□□ -1.32
ATG4A-206ENST00000457035 DAZ3Q9NR90 486 aaKnown RBP6.82□□□□□ -1.32
ATG4A-206ENST00000457035 DNAH11Q96DT5 4516 aa6.82□□□□□ -1.32
ATG4A-206ENST00000457035 K7EP13 123 aa6.81□□□□□ -1.32
ATG4A-206ENST00000457035 RTL8CO15255 209 aa6.81□□□□□ -1.32
ATG4A-206ENST00000457035 CAMPP49913 170 aa6.81□□□□□ -1.32
ATG4A-206ENST00000457035 TTC32Q5I0X7 151 aa6.81□□□□□ -1.32
ATG4A-206ENST00000457035 LINC01556Q5JQF7 62 aa6.81□□□□□ -1.32
ATG4A-206ENST00000457035 FAM104BQ5XKR9 115 aa6.81□□□□□ -1.32
ATG4A-206ENST00000457035 MRPL54Q6P161 138 aaKnown RBP6.81□□□□□ -1.32
ATG4A-206ENST00000457035 RPL39LQ96EH5 51 aaKnown RBP6.81□□□□□ -1.32
ATG4A-206ENST00000457035 IMMP2LQ96T52 175 aa6.81□□□□□ -1.32
ATG4A-206ENST00000457035 CTDSP1Q9GZU7 261 aa6.81□□□□□ -1.32
ATG4A-206ENST00000457035 PKD1P98161 4303 aa6.8□□□□□ -1.32
ATG4A-206ENST00000457035 TRBV6-8A0A0A6YYG3 113 aa6.8□□□□□ -1.32
ATG4A-206ENST00000457035 C7orf77A4D0Y5 90 aa6.8□□□□□ -1.32
ATG4A-206ENST00000457035 HBBP68871 147 aa6.8□□□□□ -1.32
ATG4A-206ENST00000457035 C1orf134Q5TEV5 83 aa6.8□□□□□ -1.32
ATG4A-206ENST00000457035 ATP5L2Q7Z4Y8 100 aa6.8□□□□□ -1.32
ATG4A-206ENST00000457035 CLRN3Q8NCR9 226 aa6.8□□□□□ -1.32
ATG4A-206ENST00000457035 TMEM242Q9NWH2 141 aa6.8□□□□□ -1.32
ATG4A-206ENST00000457035 TRAV9-2A0A087WT02 112 aa6.79□□□□□ -1.32
ATG4A-206ENST00000457035 TRBV6-5A0A0K0K1A5 114 aa6.79□□□□□ -1.32
ATG4A-206ENST00000457035 BTF3P20290 206 aaKnown RBP6.79□□□□□ -1.32
ATG4A-206ENST00000457035 RPS10P46783 165 aaKnown RBP6.79□□□□□ -1.32
ATG4A-206ENST00000457035 MRPL51Q4U2R6 128 aaKnown RBP6.79□□□□□ -1.32
ATG4A-206ENST00000457035 TMEM97Q5BJF2 176 aa6.79□□□□□ -1.32
ATG4A-206ENST00000457035 NIT1Q86X76 327 aa6.79□□□□□ -1.32
ATG4A-206ENST00000457035 C6orf223Q8N319 242 aa6.79□□□□□ -1.32
ATG4A-206ENST00000457035 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.79□□□□□ -1.32
ATG4A-206ENST00000457035 MRAP2Q96G30 205 aa6.79□□□□□ -1.32
ATG4A-206ENST00000457035 HECTD4Q9Y4D8 3996 aa6.78□□□□□ -1.32
ATG4A-206ENST00000457035 SMKR1H3BMG3 65 aa6.78□□□□□ -1.32
ATG4A-206ENST00000457035 IGHV3-30P01768 117 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms