RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 TNFRSF18Q9Y5U5 241 aa9.87□□□□□ -0.83
LINC00887-204ENST00000456816 TRBV24-1A0A075B6N3 115 aa9.86□□□□□ -0.83
LINC00887-204ENST00000456816 M0QY20 66 aa9.86□□□□□ -0.83
LINC00887-204ENST00000456816 HLA-DQA1P01909 254 aa9.86□□□□□ -0.83
LINC00887-204ENST00000456816 CKS2P33552 79 aa9.86□□□□□ -0.83
LINC00887-204ENST00000456816 OR10J3Q5JRS4 329 aa9.86□□□□□ -0.83
LINC00887-204ENST00000456816 TMEM136Q6ZRR5 245 aa9.86□□□□□ -0.83
LINC00887-204ENST00000456816 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.86□□□□□ -0.83
LINC00887-204ENST00000456816 ZNRF2Q8NHG8 242 aa9.86□□□□□ -0.83
LINC00887-204ENST00000456816 FRZBQ92765 325 aa9.86□□□□□ -0.83
LINC00887-204ENST00000456816 NACAE9PAV3 2078 aa9.86□□□□□ -0.83
LINC00887-204ENST00000456816 SMKR1H3BMG3 65 aa9.85□□□□□ -0.83
LINC00887-204ENST00000456816 APCSP02743 223 aa9.85□□□□□ -0.83
LINC00887-204ENST00000456816 TCTAP57738 103 aa9.85□□□□□ -0.83
LINC00887-204ENST00000456816 SH2D6Q7Z4S9 175 aa9.85□□□□□ -0.83
LINC00887-204ENST00000456816 NEXN-AS1Q8NBZ9 246 aa9.85□□□□□ -0.83
LINC00887-204ENST00000456816 GNB1LQ9BYB4 327 aa9.85□□□□□ -0.83
LINC00887-204ENST00000456816 NIT2Q9NQR4 276 aa9.85□□□□□ -0.83
LINC00887-204ENST00000456816 TRBV7-3A0A075B6L6 115 aa9.84□□□□□ -0.83
LINC00887-204ENST00000456816 D6R8Y8 96 aa9.84□□□□□ -0.83
LINC00887-204ENST00000456816 PPP1R17O96001 155 aa9.84□□□□□ -0.83
LINC00887-204ENST00000456816 MT-ND6P03923 174 aa9.84□□□□□ -0.83
LINC00887-204ENST00000456816 NEGR1Q7Z3B1 354 aa9.84□□□□□ -0.83
LINC00887-204ENST00000456816 RPL39LQ96EH5 51 aaKnown RBP9.84□□□□□ -0.83
LINC00887-204ENST00000456816 DNAJC30Q96LL9 226 aa9.84□□□□□ -0.83
LINC00887-204ENST00000456816 Q9UF83 564 aa9.84□□□□□ -0.83
LINC00887-204ENST00000456816 APLNQ9ULZ1 77 aa9.84□□□□□ -0.83
LINC00887-204ENST00000456816 PPBPP02775 128 aa9.83□□□□□ -0.84
LINC00887-204ENST00000456816 FABP9Q0Z7S8 132 aa9.83□□□□□ -0.84
LINC00887-204ENST00000456816 UBE2DNLQ8IWF7 75 aa9.83□□□□□ -0.84
LINC00887-204ENST00000456816 ORMDL3Q8N138 153 aa9.83□□□□□ -0.84
LINC00887-204ENST00000456816 ATP6V0E2Q8NHE4 81 aa9.83□□□□□ -0.84
LINC00887-204ENST00000456816 YPEL4Q96NS1 127 aa9.83□□□□□ -0.84
LINC00887-204ENST00000456816 MRPL18Q9H0U6 180 aaKnown RBP9.83□□□□□ -0.84
LINC00887-204ENST00000456816 TRAPPC1Q9Y5R8 145 aa9.83□□□□□ -0.84
LINC00887-204ENST00000456816 KIAA1644Q3SXP7 199 aa9.82□□□□□ -0.84
LINC00887-204ENST00000456816 PRELID3AQ96N28 172 aa9.82□□□□□ -0.84
LINC00887-204ENST00000456816 ST20Q9HBF5 79 aa9.82□□□□□ -0.84
LINC00887-204ENST00000456816 IGHV3-38A0A0C4DH36 116 aa9.81□□□□□ -0.84
LINC00887-204ENST00000456816 GAS8-AS1O95177 125 aa9.81□□□□□ -0.84
LINC00887-204ENST00000456816 RPS10P46783 165 aaKnown RBP9.81□□□□□ -0.84
LINC00887-204ENST00000456816 CCL18P55774 89 aa9.81□□□□□ -0.84
LINC00887-204ENST00000456816 UBE2D3P61077 147 aa9.81□□□□□ -0.84
LINC00887-204ENST00000456816 UBE2D2P62837 147 aa9.81□□□□□ -0.84
LINC00887-204ENST00000456816 GTSF1LQ9H1H1 148 aa9.8□□□□□ -0.84
LINC00887-204ENST00000456816 SDHAF1A6NFY7 115 aa9.79□□□□□ -0.84
LINC00887-204ENST00000456816 TNFRSF6BO95407 300 aa9.79□□□□□ -0.84
LINC00887-204ENST00000456816 NPYP01303 97 aa9.79□□□□□ -0.84
LINC00887-204ENST00000456816 LINC00694P0DN24 101 aa9.79□□□□□ -0.84
LINC00887-204ENST00000456816 DAZ4Q86SG3 579 aaKnown RBP9.79□□□□□ -0.84
LINC00887-204ENST00000456816 NRACQ8N912 160 aa9.79□□□□□ -0.84
LINC00887-204ENST00000456816 DAZ3Q9NR90 486 aaKnown RBP9.79□□□□□ -0.84
LINC00887-204ENST00000456816 TRBV6-5A0A0K0K1A5 114 aa9.78□□□□□ -0.84
LINC00887-204ENST00000456816 COLCA2A8K830 154 aa9.78□□□□□ -0.84
LINC00887-204ENST00000456816 RAB5AP20339 215 aa9.78□□□□□ -0.84
LINC00887-204ENST00000456816 PMCHP20382 165 aa9.78□□□□□ -0.84
LINC00887-204ENST00000456816 SUMO2P61956 95 aaKnown RBP9.78□□□□□ -0.84
LINC00887-204ENST00000456816 ESRGQ1W209 222 aa9.78□□□□□ -0.84
LINC00887-204ENST00000456816 LYPD5Q6UWN5 251 aa9.78□□□□□ -0.84
LINC00887-204ENST00000456816 LAMTOR2Q9Y2Q5 125 aa9.78□□□□□ -0.84
LINC00887-204ENST00000456816 PHOX2AO14813 284 aa9.77□□□□□ -0.85
LINC00887-204ENST00000456816 COTL1Q14019 142 aa9.77□□□□□ -0.85
LINC00887-204ENST00000456816 DEFB104AQ8WTQ1 72 aa9.77□□□□□ -0.85
LINC00887-204ENST00000456816 C20orf78Q9BR46 151 aa9.77□□□□□ -0.85
LINC00887-204ENST00000456816 MAP1LC3AQ9H492 121 aa9.77□□□□□ -0.85
LINC00887-204ENST00000456816 LOC389332A0A1B0GUA5 103 aa9.76□□□□□ -0.85
LINC00887-204ENST00000456816 I3L3M4 83 aa9.76□□□□□ -0.85
LINC00887-204ENST00000456816 FCER1GP30273 86 aa9.76□□□□□ -0.85
LINC00887-204ENST00000456816 TMEM97Q5BJF2 176 aa9.76□□□□□ -0.85
LINC00887-204ENST00000456816 TMEM70Q9BUB7 260 aa9.76□□□□□ -0.85
LINC00887-204ENST00000456816 TRAV8-6A0A0B4J262 113 aa9.75□□□□□ -0.85
LINC00887-204ENST00000456816 VCYO14598 125 aa9.75□□□□□ -0.85
LINC00887-204ENST00000456816 LY6G6CO95867 125 aa9.75□□□□□ -0.85
LINC00887-204ENST00000456816 TIRAPP58753 221 aa9.75□□□□□ -0.85
LINC00887-204ENST00000456816 KIR2DL4Q99706 377 aa9.75□□□□□ -0.85
LINC00887-204ENST00000456816 SMIM2Q9BVW6 85 aa9.75□□□□□ -0.85
LINC00887-204ENST00000456816 LINC00588Q9Y4M8 146 aa9.75□□□□□ -0.85
LINC00887-204ENST00000456816 AMTP48728 403 aa9.74□□□□□ -0.85
LINC00887-204ENST00000456816 LELP1Q5T871 98 aa9.74□□□□□ -0.85
LINC00887-204ENST00000456816 ALKBH7Q9BT30 221 aaPredicted RBP9.74□□□□□ -0.85
LINC00887-204ENST00000456816 MRPS16Q9Y3D3 137 aaKnown RBP9.74□□□□□ -0.85
LINC00887-204ENST00000456816 DNAH7Q8WXX0 4024 aa9.73□□□□□ -0.85
LINC00887-204ENST00000456816 TRBV25-1A0A075B6N4 114 aa9.73□□□□□ -0.85
LINC00887-204ENST00000456816 TRBV6-8A0A0A6YYG3 113 aa9.73□□□□□ -0.85
LINC00887-204ENST00000456816 IGHV1-24A0A0C4DH33 117 aa9.73□□□□□ -0.85
LINC00887-204ENST00000456816 TRGC2P03986 189 aa9.73□□□□□ -0.85
LINC00887-204ENST00000456816 POLR2KP53803 58 aaKnown RBP9.73□□□□□ -0.85
LINC00887-204ENST00000456816 LGALS9CQ6DKI2 356 aa9.73□□□□□ -0.85
LINC00887-204ENST00000456816 CHCHD5Q9BSY4 110 aa9.73□□□□□ -0.85
LINC00887-204ENST00000456816 TRBV27A0A0K0K1C4 114 aa9.72□□□□□ -0.85
LINC00887-204ENST00000456816 RPL32P62910 135 aaKnown RBP9.72□□□□□ -0.85
LINC00887-204ENST00000456816 PRSS3P2Q8NHM4 247 aa9.72□□□□□ -0.85
LINC00887-204ENST00000456816 TMEM243Q9BU79 118 aa9.72□□□□□ -0.85
LINC00887-204ENST00000456816 UBE2L6O14933 153 aa9.71□□□□□ -0.86
LINC00887-204ENST00000456816 TCAPO15273 167 aa9.71□□□□□ -0.86
LINC00887-204ENST00000456816 TSHBP01222 138 aa9.71□□□□□ -0.86
LINC00887-204ENST00000456816 LINC00476Q8WZB0 136 aa9.71□□□□□ -0.86
LINC00887-204ENST00000456816 NXT2Q9NPJ8 142 aaKnown RBP9.71□□□□□ -0.86
LINC00887-204ENST00000456816 TMEM262E9PQX1 116 aa9.7□□□□□ -0.86
LINC00887-204ENST00000456816 IQCJQ1A5X6 159 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms