RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 DAZ1Q9NQZ3 744 aaKnown RBP9.25□□□□□ -0.93
LINC00959-201ENST00000456581 TSPEAR-AS2P59090 65 aa9.25□□□□□ -0.93
LINC00959-201ENST00000456581 TP53TG1Q9Y2A0 90 aa9.25□□□□□ -0.93
LINC00959-201ENST00000456581 TRAV12-3A0A0B4J271 114 aa9.24□□□□□ -0.93
LINC00959-201ENST00000456581 F5H697 171 aa9.24□□□□□ -0.93
LINC00959-201ENST00000456581 GAGE13Q4V321 117 aa9.24□□□□□ -0.93
LINC00959-201ENST00000456581 ORMDL2Q53FV1 153 aa9.24□□□□□ -0.93
LINC00959-201ENST00000456581 SIGMAR1Q99720 223 aa9.24□□□□□ -0.93
LINC00959-201ENST00000456581 MRPL16Q9NX20 251 aaKnown RBP9.24□□□□□ -0.93
LINC00959-201ENST00000456581 LOC107984156A0A0G2JMH3 177 aa9.24□□□□□ -0.93
LINC00959-201ENST00000456581 SYNJ2BPP57105 145 aa9.24□□□□□ -0.93
LINC00959-201ENST00000456581 ARL17AQ8IVW1 177 aa9.24□□□□□ -0.93
LINC00959-201ENST00000456581 CLUHP3Q96NS8 147 aa9.24□□□□□ -0.93
LINC00959-201ENST00000456581 DUX3Q96PT4 197 aa9.24□□□□□ -0.93
LINC00959-201ENST00000456581 IGHV3-64A0A075B6Q5 118 aa9.23□□□□□ -0.93
LINC00959-201ENST00000456581 TRAV12-1A0A0B4J245 112 aa9.23□□□□□ -0.93
LINC00959-201ENST00000456581 SRSF9Q13242 221 aaKnown RBP eCLIP9.23□□□□□ -0.93
LINC00959-201ENST00000456581 OTOGQ6ZRI0 2925 aa9.23□□□□□ -0.93
LINC00959-201ENST00000456581 LINC00477Q96M19 166 aa9.23□□□□□ -0.93
LINC00959-201ENST00000456581 ZNF256Q9Y2P7 627 aaPredicted RBP9.23□□□□□ -0.93
LINC00959-201ENST00000456581 IGLV4-69A0A075B6H9 119 aa9.23□□□□□ -0.93
LINC00959-201ENST00000456581 IGHV4OR15-8A0A075B7B6 117 aa9.23□□□□□ -0.93
LINC00959-201ENST00000456581 A0A087WW49 117 aa9.23□□□□□ -0.93
LINC00959-201ENST00000456581 PSMB2P49721 201 aa9.23□□□□□ -0.93
LINC00959-201ENST00000456581 LINC00315P59091 139 aa9.23□□□□□ -0.93
LINC00959-201ENST00000456581 ZNF580Q9UK33 172 aa9.23□□□□□ -0.93
LINC00959-201ENST00000456581 FN1P02751 2386 aaKnown RBP9.22□□□□□ -0.93
LINC00959-201ENST00000456581 OVOL1O14753 267 aa9.22□□□□□ -0.93
LINC00959-201ENST00000456581 SUMO4Q6EEV6 95 aa9.22□□□□□ -0.93
LINC00959-201ENST00000456581 LRRC75A-AS1Q8N1F1 130 aa9.22□□□□□ -0.93
LINC00959-201ENST00000456581 ANK3Q12955 4377 aaKnown RBP9.22□□□□□ -0.93
LINC00959-201ENST00000456581 HIVEP2P31629 2446 aa9.22□□□□□ -0.93
LINC00959-201ENST00000456581 CD7P09564 240 aa9.22□□□□□ -0.93
LINC00959-201ENST00000456581 TMEM238LA0A1B0GVL6 79 aa9.21□□□□□ -0.93
LINC00959-201ENST00000456581 F8W1H4 67 aa9.21□□□□□ -0.93
LINC00959-201ENST00000456581 MDFICQ9P1T7 246 aa9.21□□□□□ -0.93
LINC00959-201ENST00000456581 TSPAN13O95857 204 aa9.21□□□□□ -0.94
LINC00959-201ENST00000456581 PRM2P04554 102 aa9.21□□□□□ -0.94
LINC00959-201ENST00000456581 ZNRF2Q8NHG8 242 aa9.21□□□□□ -0.94
LINC00959-201ENST00000456581 KIR2DL4Q99706 377 aa9.21□□□□□ -0.94
LINC00959-201ENST00000456581 KIF25-AS1Q9Y6Z4 181 aa9.21□□□□□ -0.94
LINC00959-201ENST00000456581 EIF4EBP3O60516 100 aaPredicted RBP9.2□□□□□ -0.94
LINC00959-201ENST00000456581 ZNF688P0C7X2 276 aa9.2□□□□□ -0.94
LINC00959-201ENST00000456581 TMEM170BQ5T4T1 132 aa9.2□□□□□ -0.94
LINC00959-201ENST00000456581 C11orf44Q8N8P7 122 aa9.2□□□□□ -0.94
LINC00959-201ENST00000456581 TAL2Q16559 108 aa9.2□□□□□ -0.94
LINC00959-201ENST00000456581 SYT8Q8NBV8 401 aa9.2□□□□□ -0.94
LINC00959-201ENST00000456581 FAM19A4Q96LR4 140 aa9.2□□□□□ -0.94
LINC00959-201ENST00000456581 MT-ATP8P03928 68 aa9.19□□□□□ -0.94
LINC00959-201ENST00000456581 HOXD3P31249 432 aaPredicted RBP9.19□□□□□ -0.94
LINC00959-201ENST00000456581 SLURP1P55000 103 aa9.19□□□□□ -0.94
LINC00959-201ENST00000456581 KHDC1LQ5JSQ8 128 aa9.19□□□□□ -0.94
LINC00959-201ENST00000456581 DCANP1Q8TF63 244 aa9.19□□□□□ -0.94
LINC00959-201ENST00000456581 CARD19Q96LW7 228 aa9.19□□□□□ -0.94
LINC00959-201ENST00000456581 K7EMT4 169 aa9.19□□□□□ -0.94
LINC00959-201ENST00000456581 CDIP1Q9H305 208 aa9.19□□□□□ -0.94
LINC00959-201ENST00000456581 A0A1B0GV72 72 aa9.18□□□□□ -0.94
LINC00959-201ENST00000456581 SDHAF1A6NFY7 115 aa9.18□□□□□ -0.94
LINC00959-201ENST00000456581 IGIPA6NJ69 53 aa9.18□□□□□ -0.94
LINC00959-201ENST00000456581 H7C2G1 150 aa9.18□□□□□ -0.94
LINC00959-201ENST00000456581 HTN1P15515 57 aa9.18□□□□□ -0.94
LINC00959-201ENST00000456581 TCTEX1D4Q5JR98 221 aa9.18□□□□□ -0.94
LINC00959-201ENST00000456581 PSMG4Q5JS54 123 aa9.18□□□□□ -0.94
LINC00959-201ENST00000456581 FAM159AQ6UWV7 190 aa9.18□□□□□ -0.94
LINC00959-201ENST00000456581 LENEPQ9Y5L5 61 aa9.18□□□□□ -0.94
LINC00959-201ENST00000456581 IGHV3-73A0A0B4J1V6 119 aa9.18□□□□□ -0.94
LINC00959-201ENST00000456581 A0A0J9YY99 117 aa9.18□□□□□ -0.94
LINC00959-201ENST00000456581 ADARB2-AS1A8MUL3 147 aa9.18□□□□□ -0.94
LINC00959-201ENST00000456581 CFAP126Q5VTH2 177 aa9.18□□□□□ -0.94
LINC00959-201ENST00000456581 TCL1BO95988 128 aa9.17□□□□□ -0.94
LINC00959-201ENST00000456581 ID1P41134 155 aa9.17□□□□□ -0.94
LINC00959-201ENST00000456581 RAX2Q96IS3 184 aa9.17□□□□□ -0.94
LINC00959-201ENST00000456581 Q9UF83 564 aa9.17□□□□□ -0.94
LINC00959-201ENST00000456581 ELANEP08246 267 aa9.17□□□□□ -0.94
LINC00959-201ENST00000456581 SPATA25Q9BR10 227 aa9.17□□□□□ -0.94
LINC00959-201ENST00000456581 ESM1Q9NQ30 184 aa9.17□□□□□ -0.94
LINC00959-201ENST00000456581 FOXI1Q12951 378 aa9.16□□□□□ -0.94
LINC00959-201ENST00000456581 ZNF56Q15929 161 aa9.16□□□□□ -0.94
LINC00959-201ENST00000456581 SPINK13Q1W4C9 94 aa9.16□□□□□ -0.94
LINC00959-201ENST00000456581 RNASE13Q5GAN3 156 aaKnown RBP9.16□□□□□ -0.94
LINC00959-201ENST00000456581 FLNBO75369 2602 aaKnown RBP9.16□□□□□ -0.94
LINC00959-201ENST00000456581 CFC1BP0CG36 223 aa9.16□□□□□ -0.94
LINC00959-201ENST00000456581 CFC1P0CG37 223 aa9.16□□□□□ -0.94
LINC00959-201ENST00000456581 P0DMU3 169 aa9.16□□□□□ -0.94
LINC00959-201ENST00000456581 FAM231AP0DMU4 169 aa9.16□□□□□ -0.94
LINC00959-201ENST00000456581 FAM231CP0DMU5 169 aa9.16□□□□□ -0.94
LINC00959-201ENST00000456581 UBE2D1P51668 147 aa9.16□□□□□ -0.94
LINC00959-201ENST00000456581 POLR2KP53803 58 aaKnown RBP9.16□□□□□ -0.94
LINC00959-201ENST00000456581 XGP55808 180 aa9.16□□□□□ -0.94
LINC00959-201ENST00000456581 KLLNB2CW77 178 aa9.15□□□□□ -0.94
LINC00959-201ENST00000456581 UBE2E2Q96LR5 201 aa9.15□□□□□ -0.94
LINC00959-201ENST00000456581 KRTAP1-1Q07627 177 aa9.15□□□□□ -0.94
LINC00959-201ENST00000456581 PMVKQ15126 192 aa9.15□□□□□ -0.94
LINC00959-201ENST00000456581 CEMP1Q6PRD7 247 aaPredicted RBP9.15□□□□□ -0.94
LINC00959-201ENST00000456581 TRPT1Q86TN4 253 aaKnown RBP9.15□□□□□ -0.94
LINC00959-201ENST00000456581 NDUFA11Q86Y39 141 aa9.15□□□□□ -0.94
LINC00959-201ENST00000456581 Q8N1Y9 231 aa9.15□□□□□ -0.94
LINC00959-201ENST00000456581 TMEM89A2RUT3 159 aa9.14□□□□□ -0.95
LINC00959-201ENST00000456581 PROK1P58294 105 aa9.14□□□□□ -0.95
LINC00959-201ENST00000456581 DNAJC9-AS1A6NH13 148 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms