RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 MEIG1Q5JSS6 88 aa7.68□□□□□ -1.18
CLIP4-208ENST00000456385 CHCHD5Q9BSY4 110 aa7.68□□□□□ -1.18
CLIP4-208ENST00000456385 SPXQ9BT56 116 aa7.68□□□□□ -1.18
CLIP4-208ENST00000456385 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.67□□□□□ -1.18
CLIP4-208ENST00000456385 TRBV30A0A0K0K1B3 111 aa7.67□□□□□ -1.18
CLIP4-208ENST00000456385 SAA4P35542 130 aa7.67□□□□□ -1.18
CLIP4-208ENST00000456385 FOXC1Q12948 553 aa7.67□□□□□ -1.18
CLIP4-208ENST00000456385 ZNF56Q15929 161 aa7.67□□□□□ -1.18
CLIP4-208ENST00000456385 CLEC2BQ92478 149 aa7.67□□□□□ -1.18
CLIP4-208ENST00000456385 ZNF292O60281 2723 aa7.67□□□□□ -1.18
CLIP4-208ENST00000456385 ADAMTSL4-AS1Q5T5F5 129 aa7.67□□□□□ -1.18
CLIP4-208ENST00000456385 APRG1Q8IVJ8 170 aa7.67□□□□□ -1.18
CLIP4-208ENST00000456385 TTC28Q96AY4 2481 aa7.66□□□□□ -1.18
CLIP4-208ENST00000456385 TRAV8-3A0A0A6YYJ7 113 aa7.66□□□□□ -1.18
CLIP4-208ENST00000456385 TRAV12-3A0A0B4J271 114 aa7.66□□□□□ -1.18
CLIP4-208ENST00000456385 LITAFQ99732 161 aa7.66□□□□□ -1.18
CLIP4-208ENST00000456385 SIRPDQ9H106 197 aa7.66□□□□□ -1.18
CLIP4-208ENST00000456385 IGHV3-11P01762 117 aa7.66□□□□□ -1.18
CLIP4-208ENST00000456385 IGF2-ASQ6U949 168 aa7.66□□□□□ -1.18
CLIP4-208ENST00000456385 ICOSQ9Y6W8 199 aa7.66□□□□□ -1.18
CLIP4-208ENST00000456385 A8MZ25 164 aa7.65□□□□□ -1.18
CLIP4-208ENST00000456385 M0QY20 66 aa7.65□□□□□ -1.18
CLIP4-208ENST00000456385 IGHV1-69P01742 117 aa7.65□□□□□ -1.18
CLIP4-208ENST00000456385 IGHV3-30-3P0DP02 117 aa7.65□□□□□ -1.18
CLIP4-208ENST00000456385 EDN2P20800 178 aa7.65□□□□□ -1.18
CLIP4-208ENST00000456385 C5orf56Q8N8D9 126 aa7.65□□□□□ -1.18
CLIP4-208ENST00000456385 LINC01600Q96MT4 127 aa7.65□□□□□ -1.18
CLIP4-208ENST00000456385 MDFICQ9P1T7 246 aa7.65□□□□□ -1.18
CLIP4-208ENST00000456385 IGLV4-3A0A075B6K6 122 aa7.64□□□□□ -1.19
CLIP4-208ENST00000456385 CDSNQ15517 529 aa7.64□□□□□ -1.19
CLIP4-208ENST00000456385 SPTA1P02549 2419 aa7.64□□□□□ -1.19
CLIP4-208ENST00000456385 RIF1Q5UIP0 2472 aaKnown RBP7.64□□□□□ -1.19
CLIP4-208ENST00000456385 TRAV41A0A0B4J266 112 aa7.64□□□□□ -1.19
CLIP4-208ENST00000456385 TRBV6-5A0A0K0K1A5 114 aa7.64□□□□□ -1.19
CLIP4-208ENST00000456385 KLLNB2CW77 178 aa7.64□□□□□ -1.19
CLIP4-208ENST00000456385 BRI3O95415 125 aa7.64□□□□□ -1.19
CLIP4-208ENST00000456385 RNASE13Q5GAN3 156 aaKnown RBP7.64□□□□□ -1.19
CLIP4-208ENST00000456385 C20orf203Q8NBC4 194 aa7.64□□□□□ -1.19
CLIP4-208ENST00000456385 MAP1AP78559 2803 aaPredicted RBP7.64□□□□□ -1.19
CLIP4-208ENST00000456385 A0A0J9YX75 114 aa7.63□□□□□ -1.19
CLIP4-208ENST00000456385 NSUN5P1Q3KNT7 163 aa7.63□□□□□ -1.19
CLIP4-208ENST00000456385 CEMP1Q6PRD7 247 aaPredicted RBP7.63□□□□□ -1.19
CLIP4-208ENST00000456385 PTPRZ1P23471 2315 aaPredicted RBP7.63□□□□□ -1.19
CLIP4-208ENST00000456385 TRAV12-2A0A075B6T6 113 aa7.63□□□□□ -1.19
CLIP4-208ENST00000456385 IGKV3-20P01619 116 aa7.63□□□□□ -1.19
CLIP4-208ENST00000456385 RHPN1-AS1Q9BWJ2 59 aa7.63□□□□□ -1.19
CLIP4-208ENST00000456385 AKAP6Q13023 2319 aa7.63□□□□□ -1.19
CLIP4-208ENST00000456385 CRYBG3Q68DQ2 2970 aa7.62□□□□□ -1.19
CLIP4-208ENST00000456385 IGHV3OR16-10A0A075B7F0 116 aa7.62□□□□□ -1.19
CLIP4-208ENST00000456385 TIMM21Q9BVV7 248 aa7.62□□□□□ -1.19
CLIP4-208ENST00000456385 ZFHX2Q9C0A1 2572 aaPredicted RBP7.62□□□□□ -1.19
CLIP4-208ENST00000456385 CEP295Q9C0D2 2601 aa7.62□□□□□ -1.19
CLIP4-208ENST00000456385 PRRC2AP48634 2157 aaKnown RBP7.62□□□□□ -1.19
CLIP4-208ENST00000456385 TRGV11A0A075B6L2 103 aa7.62□□□□□ -1.19
CLIP4-208ENST00000456385 FAM223BA6NKX1 122 aa7.62□□□□□ -1.19
CLIP4-208ENST00000456385 NDUFA4O00483 81 aa7.62□□□□□ -1.19
CLIP4-208ENST00000456385 FAM223AQ8IWN6 122 aa7.62□□□□□ -1.19
CLIP4-208ENST00000456385 DAND5Q8N907 189 aa7.62□□□□□ -1.19
CLIP4-208ENST00000456385 FAM104AQ969W3 186 aa7.62□□□□□ -1.19
CLIP4-208ENST00000456385 H3BT86 120 aa7.61□□□□□ -1.19
CLIP4-208ENST00000456385 I3L3M4 83 aa7.61□□□□□ -1.19
CLIP4-208ENST00000456385 RHOHQ15669 191 aa7.61□□□□□ -1.19
CLIP4-208ENST00000456385 C11orf71Q6IPW1 123 aa7.61□□□□□ -1.19
CLIP4-208ENST00000456385 IGHV3-16A0A0C4DH30 117 aa7.61□□□□□ -1.19
CLIP4-208ENST00000456385 LST1O00453 97 aa7.61□□□□□ -1.19
CLIP4-208ENST00000456385 COX6CP09669 75 aa7.61□□□□□ -1.19
CLIP4-208ENST00000456385 C19orf54Q5BKX5 351 aa7.61□□□□□ -1.19
CLIP4-208ENST00000456385 NDUFA12Q9UI09 145 aa7.61□□□□□ -1.19
CLIP4-208ENST00000456385 SPTAN1Q13813 2472 aaKnown RBP7.6□□□□□ -1.19
CLIP4-208ENST00000456385 LINC01587Q99440 93 aa7.6□□□□□ -1.19
CLIP4-208ENST00000456385 CSMD2Q7Z408 3487 aa7.6□□□□□ -1.19
CLIP4-208ENST00000456385 CUBNO60494 3623 aa7.6□□□□□ -1.19
CLIP4-208ENST00000456385 FAM236AA0A1B0GUQ0 79 aa7.6□□□□□ -1.19
CLIP4-208ENST00000456385 FAM236BA0A1B0GV22 79 aa7.6□□□□□ -1.19
CLIP4-208ENST00000456385 CD28P10747 220 aa7.6□□□□□ -1.19
CLIP4-208ENST00000456385 C9orf85Q96MD7 179 aa7.6□□□□□ -1.19
CLIP4-208ENST00000456385 COL6A6A6NMZ7 2263 aa7.59□□□□□ -1.19
CLIP4-208ENST00000456385 IGHV3-73A0A0B4J1V6 119 aa7.59□□□□□ -1.19
CLIP4-208ENST00000456385 FAM240AA0A1B0GVK7 77 aa7.59□□□□□ -1.19
CLIP4-208ENST00000456385 CCL21O00585 134 aa7.59□□□□□ -1.19
CLIP4-208ENST00000456385 NPFFO15130 113 aa7.59□□□□□ -1.19
CLIP4-208ENST00000456385 MIAQ16674 131 aa7.59□□□□□ -1.19
CLIP4-208ENST00000456385 TMEM61Q8N0U2 210 aa7.59□□□□□ -1.19
CLIP4-208ENST00000456385 PPDPFQ9H3Y8 114 aa7.59□□□□□ -1.19
CLIP4-208ENST00000456385 IGHV1-58A0A0C4DH39 117 aa7.58□□□□□ -1.2
CLIP4-208ENST00000456385 TRBV7-7A0A0K0K1E9 115 aa7.58□□□□□ -1.2
CLIP4-208ENST00000456385 MRPS36P82909 103 aaKnown RBP7.58□□□□□ -1.2
CLIP4-208ENST00000456385 MRPL23Q16540 153 aaKnown RBP7.58□□□□□ -1.2
CLIP4-208ENST00000456385 DEFB121Q5J5C9 76 aa7.58□□□□□ -1.2
CLIP4-208ENST00000456385 DUX5Q96PT3 197 aa7.58□□□□□ -1.2
CLIP4-208ENST00000456385 SPANXDQ9BXN6 97 aa7.58□□□□□ -1.2
CLIP4-208ENST00000456385 SPANXCQ9NY87 97 aa7.58□□□□□ -1.2
CLIP4-208ENST00000456385 PROK1P58294 105 aa7.58□□□□□ -1.2
CLIP4-208ENST00000456385 UBTD1Q9HAC8 227 aa7.58□□□□□ -1.2
CLIP4-208ENST00000456385 Q9UF83 564 aa7.58□□□□□ -1.2
CLIP4-208ENST00000456385 TNFRSF18Q9Y5U5 241 aa7.58□□□□□ -1.2
CLIP4-208ENST00000456385 SMCR5Q8TEV8 140 aa7.57□□□□□ -1.2
CLIP4-208ENST00000456385 DCANP1Q8TF63 244 aa7.57□□□□□ -1.2
CLIP4-208ENST00000456385 VSIG2Q96IQ7 327 aa7.57□□□□□ -1.2
CLIP4-208ENST00000456385 VPREB3Q9UKI3 123 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms