RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 POLR2KP53803 58 aaKnown RBP3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 FAM162BQ5T6X4 162 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 SOSTDC1Q6X4U4 206 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 MUSTN1Q8IVN3 82 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 ATP6V0E2Q8NHE4 81 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 FAM218AQ96MZ4 157 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 IGHV1-8P0DP01 117 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 ARL3P36405 182 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 MFAP4P55083 255 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 C4orf26Q17RF5 130 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 MAP1LC3AQ9H492 121 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 NXT2Q9NPJ8 142 aaKnown RBP3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 PRO1854Q9UHT4 67 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 IGHV3OR16-10A0A075B7F0 116 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 TRAV8-4A0A0B4J246 113 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 J3QR89 54 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 LGALS9O00182 355 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 PRSS2P07478 247 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 PLGLB1Q02325 96 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 IGLV11-55A0A075B6I3 123 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 TRAV41A0A0B4J266 112 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 IGHV1-3A0A0C4DH29 117 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 A8MWV9 139 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 G3V318 75 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 BEAN1Q3B7T3 259 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 A0A0G2JNJ9 132 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 TMEM223A0PJW6 202 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 NDUFA7O95182 113 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 PROK1P58294 105 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 NPC2P61916 151 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 SS18Q15532 418 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 UNQ9165/PRO28630Q6UXU0 137 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 SCGB1D4Q6XE38 83 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 LINC00477Q96M19 166 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 CITED2Q99967 270 aaPredicted RBP3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 Q9UFV3 132 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 FAM236AA0A1B0GUQ0 79 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 FAM236BA0A1B0GV22 79 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 TRBV12-3P01733 135 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 TCF15Q12870 199 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 TAL2Q16559 108 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 LINC01600Q96MT4 127 aa3.35□□□□□ -1.87
DEPDC1-202ENST00000456315 A0A1W2PPR1 153 aa3.34□□□□□ -1.87
DEPDC1-202ENST00000456315 LINC01619G3V211 115 aa3.34□□□□□ -1.87
DEPDC1-202ENST00000456315 LY6LH3BQJ8 138 aa3.34□□□□□ -1.87
DEPDC1-202ENST00000456315 LINC01559Q495D7 138 aa3.34□□□□□ -1.87
DEPDC1-202ENST00000456315 Q5XG85 94 aa3.34□□□□□ -1.87
DEPDC1-202ENST00000456315 NRGNQ92686 78 aa3.34□□□□□ -1.87
DEPDC1-202ENST00000456315 LAGE3Q14657 143 aa3.34□□□□□ -1.87
DEPDC1-202ENST00000456315 IGF2-ASQ6U949 168 aa3.34□□□□□ -1.87
DEPDC1-202ENST00000456315 TMEM101Q96IK0 257 aa3.34□□□□□ -1.87
DEPDC1-202ENST00000456315 SCNM1Q9BWG6 230 aa3.34□□□□□ -1.87
DEPDC1-202ENST00000456315 RAB1BQ9H0U4 201 aa3.34□□□□□ -1.87
DEPDC1-202ENST00000456315 YAE1D1Q9NRH1 226 aa3.34□□□□□ -1.87
DEPDC1-202ENST00000456315 IFITM1P13164 125 aa3.34□□□□□ -1.87
DEPDC1-202ENST00000456315 DNAH9Q9NYC9 4486 aa3.34□□□□□ -1.87
DEPDC1-202ENST00000456315 CLEC3BP05452 202 aa3.34□□□□□ -1.88
DEPDC1-202ENST00000456315 COX7A1P24310 79 aa3.34□□□□□ -1.88
DEPDC1-202ENST00000456315 ATP5IP56385 69 aaPredicted RBP3.34□□□□□ -1.88
DEPDC1-202ENST00000456315 hADV29S1A0JD25 119 aa3.34□□□□□ -1.88
DEPDC1-202ENST00000456315 GRNP28799 593 aaKnown RBP3.34□□□□□ -1.88
DEPDC1-202ENST00000456315 RHOHQ15669 191 aa3.34□□□□□ -1.88
DEPDC1-202ENST00000456315 SCGB3A1Q96QR1 104 aa3.34□□□□□ -1.88
DEPDC1-202ENST00000456315 IGKV3-7A0A075B6H7 116 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 A0A087WWL8 130 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 TRAV17A0A0B4J275 112 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 TMEM178BH3BS89 294 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 IGHG3P01860 377 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 TOMM6Q96B49 74 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 CCDC140Q96MF4 163 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 METTL26Q96S19 204 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 IGHV4-4A0A075B6R2 117 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 A0A0U1RRA0 63 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 J3QQQ9 107 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 ATP5LO75964 103 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 IGHV4-39P01824 125 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 ZNF876PQ49A33 203 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 SPATA3Q8NHX4 192 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 TMEM262E9PQX1 116 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 M0R1B8 84 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 M0R2P5 195 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 ITLN2Q8WWU7 325 aaPredicted RBP3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 ZNF576Q9H609 170 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 TP53TG1Q9Y2A0 90 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 RPL13AP40429 203 aaKnown RBP3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 HERVK_113P63121 156 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 LINC00311Q8N616 119 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 FAM19A4Q96LR4 140 aa3.33□□□□□ -1.88
DEPDC1-202ENST00000456315 BUB1B-PAK6H3BSN5 160 aa3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 I3L3M4 83 aa3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 CDX4O14627 284 aaPredicted RBP3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 TMEM170BQ5T4T1 132 aa3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 LINC01561Q8N1V8 128 aa3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 EDA2RQ9HAV5 297 aa3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 TRAV2A0A0B4J234 112 aa3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 SMIM9A6NGZ8 99 aa3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 NPFFO15130 113 aa3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 PLNP26678 52 aa3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 KIR2DS2P43631 304 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms