RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 TNFRSF6BO95407 300 aa11.69□□□□□ -0.54
LINC00963-208ENST00000454968 CRYBA4P53673 196 aa11.69□□□□□ -0.54
LINC00963-208ENST00000454968 RPL32P62910 135 aaKnown RBP11.69□□□□□ -0.54
LINC00963-208ENST00000454968 Q6ZTC4 211 aa11.69□□□□□ -0.54
LINC00963-208ENST00000454968 C18orf32Q8TCD1 76 aa11.69□□□□□ -0.54
LINC00963-208ENST00000454968 C20orf78Q9BR46 151 aa11.69□□□□□ -0.54
LINC00963-208ENST00000454968 NIT2Q9NQR4 276 aa11.69□□□□□ -0.54
LINC00963-208ENST00000454968 Q9UF83 564 aa11.69□□□□□ -0.54
LINC00963-208ENST00000454968 PRO0255Q9UI72 69 aa11.69□□□□□ -0.54
LINC00963-208ENST00000454968 TRGV4A0A0C4DH28 118 aa11.69□□□□□ -0.54
LINC00963-208ENST00000454968 LINC00694P0DN24 101 aa11.69□□□□□ -0.54
LINC00963-208ENST00000454968 NANOS2P60321 138 aaKnown RBP11.69□□□□□ -0.54
LINC00963-208ENST00000454968 Q0VG73 95 aa11.69□□□□□ -0.54
LINC00963-208ENST00000454968 RPL39LQ96EH5 51 aaKnown RBP11.69□□□□□ -0.54
LINC00963-208ENST00000454968 DNAJC30Q96LL9 226 aa11.69□□□□□ -0.54
LINC00963-208ENST00000454968 HHLA3Q9XRX5 114 aa11.69□□□□□ -0.54
LINC00963-208ENST00000454968 POLR2KP53803 58 aaKnown RBP11.68□□□□□ -0.54
LINC00963-208ENST00000454968 RHOHQ15669 191 aa11.68□□□□□ -0.54
LINC00963-208ENST00000454968 OR10J3Q5JRS4 329 aa11.68□□□□□ -0.54
LINC00963-208ENST00000454968 NEXN-AS1Q8NBZ9 246 aa11.68□□□□□ -0.54
LINC00963-208ENST00000454968 IGLV2-18A0A075B6J9 118 aa11.67□□□□□ -0.54
LINC00963-208ENST00000454968 H3BNG1 76 aa11.67□□□□□ -0.54
LINC00963-208ENST00000454968 P0DMU3 169 aa11.67□□□□□ -0.54
LINC00963-208ENST00000454968 FAM231AP0DMU4 169 aa11.67□□□□□ -0.54
LINC00963-208ENST00000454968 FAM231CP0DMU5 169 aa11.67□□□□□ -0.54
LINC00963-208ENST00000454968 VSIG2Q96IQ7 327 aa11.67□□□□□ -0.54
LINC00963-208ENST00000454968 TGP01266 2768 aa11.67□□□□□ -0.54
LINC00963-208ENST00000454968 SUMO2P61956 95 aaKnown RBP11.66□□□□□ -0.54
LINC00963-208ENST00000454968 COA6Q5JTJ3 125 aaKnown RBP11.66□□□□□ -0.54
LINC00963-208ENST00000454968 CSMD3Q7Z407 3707 aa11.65□□□□□ -0.54
LINC00963-208ENST00000454968 TRBV7-3A0A075B6L6 115 aa11.65□□□□□ -0.54
LINC00963-208ENST00000454968 TRBV27A0A0K0K1C4 114 aa11.65□□□□□ -0.54
LINC00963-208ENST00000454968 LINC01546A6NGU7 62 aa11.65□□□□□ -0.54
LINC00963-208ENST00000454968 RAB5BP61020 215 aa11.65□□□□□ -0.54
LINC00963-208ENST00000454968 TMEM70Q9BUB7 260 aa11.65□□□□□ -0.54
LINC00963-208ENST00000454968 URB1-AS1Q96HZ7 61 aa11.64□□□□□ -0.55
LINC00963-208ENST00000454968 PRADC1Q9BSG0 188 aa11.64□□□□□ -0.55
LINC00963-208ENST00000454968 TRAV10A0A0B4J240 114 aa11.63□□□□□ -0.55
LINC00963-208ENST00000454968 SDHAF1A6NFY7 115 aa11.63□□□□□ -0.55
LINC00963-208ENST00000454968 F5H768 121 aa11.63□□□□□ -0.55
LINC00963-208ENST00000454968 UBE2D3P61077 147 aa11.63□□□□□ -0.55
LINC00963-208ENST00000454968 UBE2D2P62837 147 aa11.63□□□□□ -0.55
LINC00963-208ENST00000454968 SMIM2Q9BVW6 85 aa11.63□□□□□ -0.55
LINC00963-208ENST00000454968 MAP1LC3AQ9H492 121 aa11.63□□□□□ -0.55
LINC00963-208ENST00000454968 ST20Q9HBF5 79 aa11.63□□□□□ -0.55
LINC00963-208ENST00000454968 DEFB131BA0A096LNP1 70 aa11.62□□□□□ -0.55
LINC00963-208ENST00000454968 LINC00310P59036 64 aa11.62□□□□□ -0.55
LINC00963-208ENST00000454968 RPL36AP83881 106 aaKnown RBP11.62□□□□□ -0.55
LINC00963-208ENST00000454968 RPL36ALQ969Q0 106 aaKnown RBP11.62□□□□□ -0.55
LINC00963-208ENST00000454968 TRAV26-1A0A087WT03 109 aa11.61□□□□□ -0.55
LINC00963-208ENST00000454968 LOC100131303A0A0U1RQF7 123 aa11.61□□□□□ -0.55
LINC00963-208ENST00000454968 PAX4O43316 350 aa11.61□□□□□ -0.55
LINC00963-208ENST00000454968 IQCJQ1A5X6 159 aa11.61□□□□□ -0.55
LINC00963-208ENST00000454968 Q8N8P6 123 aa11.61□□□□□ -0.55
LINC00963-208ENST00000454968 NXT2Q9NPJ8 142 aaKnown RBP11.61□□□□□ -0.55
LINC00963-208ENST00000454968 TNFRSF18Q9Y5U5 241 aa11.61□□□□□ -0.55
LINC00963-208ENST00000454968 K7EMI3 77 aa11.6□□□□□ -0.55
LINC00963-208ENST00000454968 VCYO14598 125 aa11.6□□□□□ -0.55
LINC00963-208ENST00000454968 ZNRF2Q8NHG8 242 aa11.6□□□□□ -0.55
LINC00963-208ENST00000454968 ESDP10768 282 aa11.6□□□□□ -0.55
LINC00963-208ENST00000454968 GYPEP15421 78 aa11.6□□□□□ -0.55
LINC00963-208ENST00000454968 HTN3P15516 51 aa11.6□□□□□ -0.55
LINC00963-208ENST00000454968 IFI27P40305 119 aaPredicted RBP11.6□□□□□ -0.55
LINC00963-208ENST00000454968 DAZ4Q86SG3 579 aaKnown RBP11.6□□□□□ -0.55
LINC00963-208ENST00000454968 DAZ3Q9NR90 486 aaKnown RBP11.6□□□□□ -0.55
LINC00963-208ENST00000454968 PMCHP20382 165 aa11.59□□□□□ -0.55
LINC00963-208ENST00000454968 NIT1Q86X76 327 aa11.59□□□□□ -0.55
LINC00963-208ENST00000454968 A0A096LPF7 62 aa11.58□□□□□ -0.56
LINC00963-208ENST00000454968 GAGE12JA6NER3 117 aa11.58□□□□□ -0.56
LINC00963-208ENST00000454968 I3L3M4 83 aa11.58□□□□□ -0.56
LINC00963-208ENST00000454968 LINC00614P0C842 121 aa11.58□□□□□ -0.56
LINC00963-208ENST00000454968 GAGE1Q13065 139 aa11.58□□□□□ -0.56
LINC00963-208ENST00000454968 GAGE4Q13068 117 aa11.58□□□□□ -0.56
LINC00963-208ENST00000454968 GAGE5Q13069 117 aa11.58□□□□□ -0.56
LINC00963-208ENST00000454968 GAGE13Q4V321 117 aa11.58□□□□□ -0.56
LINC00963-208ENST00000454968 PHLDA1Q8WV24 401 aaPredicted RBP11.58□□□□□ -0.56
LINC00963-208ENST00000454968 CHCHD1Q96BP2 118 aaKnown RBP11.58□□□□□ -0.56
LINC00963-208ENST00000454968 A0A0J9YY99 117 aa11.57□□□□□ -0.56
LINC00963-208ENST00000454968 LOC389332A0A1B0GUA5 103 aa11.57□□□□□ -0.56
LINC00963-208ENST00000454968 MRPL23Q16540 153 aaKnown RBP11.57□□□□□ -0.56
LINC00963-208ENST00000454968 PRSS3P2Q8NHM4 247 aa11.57□□□□□ -0.56
LINC00963-208ENST00000454968 TCAPO15273 167 aa11.56□□□□□ -0.56
LINC00963-208ENST00000454968 SERF1AO75920 110 aa11.56□□□□□ -0.56
LINC00963-208ENST00000454968 TSHBP01222 138 aa11.56□□□□□ -0.56
LINC00963-208ENST00000454968 SH2D6Q7Z4S9 175 aa11.56□□□□□ -0.56
LINC00963-208ENST00000454968 BAGE3Q86Y29 109 aa11.56□□□□□ -0.56
LINC00963-208ENST00000454968 GTSF1LQ9H1H1 148 aa11.56□□□□□ -0.56
LINC00963-208ENST00000454968 AP5S1Q9NUS5 200 aa11.56□□□□□ -0.56
LINC00963-208ENST00000454968 STARD9Q9P2P6 4700 aa11.56□□□□□ -0.56
LINC00963-208ENST00000454968 PLECQ15149 4684 aaKnown RBP11.55□□□□□ -0.56
LINC00963-208ENST00000454968 NUPR1O60356 82 aa11.55□□□□□ -0.56
LINC00963-208ENST00000454968 NEGR1Q7Z3B1 354 aa11.55□□□□□ -0.56
LINC00963-208ENST00000454968 KIR2DL4Q99706 377 aa11.55□□□□□ -0.56
LINC00963-208ENST00000454968 ICOSQ9Y6W8 199 aa11.55□□□□□ -0.56
LINC00963-208ENST00000454968 C5orf52A6NGY3 159 aa11.54□□□□□ -0.56
LINC00963-208ENST00000454968 NDUFA6P56556 154 aa11.54□□□□□ -0.56
LINC00963-208ENST00000454968 TIRAPP58753 221 aa11.54□□□□□ -0.56
LINC00963-208ENST00000454968 NTM-AS1Q6ZSK4 140 aa11.54□□□□□ -0.56
LINC00963-208ENST00000454968 FA2HQ7L5A8 372 aa11.54□□□□□ -0.56
LINC00963-208ENST00000454968 ATP6V0E2Q8NHE4 81 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 321.4 ms