RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 SSTP61278 116 aa3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 RPL19P84098 196 aaKnown RBP3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 PEA15Q15121 130 aa3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 ZNF56Q15929 161 aa3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 ZFP2Q6ZN57 461 aa3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 NIT2Q9NQR4 276 aa3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 EPDR1Q9UM22 224 aa3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 K7EQM0 130 aa3.83□□□□□ -1.8
HLA-DPA3-207ENST00000454398 RHODO00212 210 aa3.83□□□□□ -1.8
HLA-DPA3-207ENST00000454398 PEX7O00628 323 aa3.83□□□□□ -1.8
HLA-DPA3-207ENST00000454398 S100A8P05109 93 aa3.83□□□□□ -1.8
HLA-DPA3-207ENST00000454398 PET100P0DJ07 73 aa3.83□□□□□ -1.8
HLA-DPA3-207ENST00000454398 ADCYAP1P18509 176 aa3.83□□□□□ -1.8
HLA-DPA3-207ENST00000454398 ATP6V0CP27449 155 aa3.83□□□□□ -1.8
HLA-DPA3-207ENST00000454398 CRIP1P50238 77 aa3.83□□□□□ -1.8
HLA-DPA3-207ENST00000454398 UBE2D3P61077 147 aa3.83□□□□□ -1.8
HLA-DPA3-207ENST00000454398 SNRPEP62304 92 aaKnown RBP3.83□□□□□ -1.8
HLA-DPA3-207ENST00000454398 UBE2D2P62837 147 aa3.83□□□□□ -1.8
HLA-DPA3-207ENST00000454398 GAGE6Q13070 117 aa3.83□□□□□ -1.8
HLA-DPA3-207ENST00000454398 ZNF726P1Q15940 193 aa3.83□□□□□ -1.8
HLA-DPA3-207ENST00000454398 INO80EQ8NBZ0 244 aaPredicted RBP3.83□□□□□ -1.8
HLA-DPA3-207ENST00000454398 OR10AG1Q8NH19 301 aa3.83□□□□□ -1.8
HLA-DPA3-207ENST00000454398 CHCHD5Q9BSY4 110 aa3.83□□□□□ -1.8
HLA-DPA3-207ENST00000454398 IL36BQ9NZH7 164 aa3.83□□□□□ -1.8
HLA-DPA3-207ENST00000454398 TNFSF18Q9UNG2 199 aa3.83□□□□□ -1.8
HLA-DPA3-207ENST00000454398 COX11Q9Y6N1 276 aa3.83□□□□□ -1.8
HLA-DPA3-207ENST00000454398 TRBV6-8A0A0A6YYG3 113 aa3.82□□□□□ -1.8
HLA-DPA3-207ENST00000454398 SERTM2A0A1B0GWG4 89 aa3.82□□□□□ -1.8
HLA-DPA3-207ENST00000454398 CIDEAO60543 219 aa3.82□□□□□ -1.8
HLA-DPA3-207ENST00000454398 H2AFB1P0C5Y9 115 aa3.82□□□□□ -1.8
HLA-DPA3-207ENST00000454398 RAB5CP51148 216 aa3.82□□□□□ -1.8
HLA-DPA3-207ENST00000454398 ZNF345Q14585 488 aa3.82□□□□□ -1.8
HLA-DPA3-207ENST00000454398 KCNIP4Q6PIL6 250 aa3.82□□□□□ -1.8
HLA-DPA3-207ENST00000454398 LINC00269Q8N2A0 174 aa3.82□□□□□ -1.8
HLA-DPA3-207ENST00000454398 NEXN-AS1Q8NBZ9 246 aa3.82□□□□□ -1.8
HLA-DPA3-207ENST00000454398 PTH2Q96A98 100 aa3.82□□□□□ -1.8
HLA-DPA3-207ENST00000454398 TCEAL7Q9BRU2 100 aa3.82□□□□□ -1.8
HLA-DPA3-207ENST00000454398 GFRA4Q9GZZ7 299 aa3.82□□□□□ -1.8
HLA-DPA3-207ENST00000454398 SMCO4Q9NRQ5 59 aa3.82□□□□□ -1.8
HLA-DPA3-207ENST00000454398 CARHSP1Q9Y2V2 147 aaKnown RBP3.82□□□□□ -1.8
HLA-DPA3-207ENST00000454398 PHLDA3Q9Y5J5 127 aa3.82□□□□□ -1.8
HLA-DPA3-207ENST00000454398 TRBV7-3A0A075B6L6 115 aa3.81□□□□□ -1.8
HLA-DPA3-207ENST00000454398 A0A1B0GV50 99 aa3.81□□□□□ -1.8
HLA-DPA3-207ENST00000454398 hDV102S1A0JD36 115 aa3.81□□□□□ -1.8
HLA-DPA3-207ENST00000454398 PHOX2AO14813 284 aa3.81□□□□□ -1.8
HLA-DPA3-207ENST00000454398 CXorf1O96002 111 aa3.81□□□□□ -1.8
HLA-DPA3-207ENST00000454398 AKR1C3P42330 323 aa3.81□□□□□ -1.8
HLA-DPA3-207ENST00000454398 RBX1P62877 108 aa3.81□□□□□ -1.8
HLA-DPA3-207ENST00000454398 RPL36AP83881 106 aaKnown RBP3.81□□□□□ -1.8
HLA-DPA3-207ENST00000454398 SRSF3P84103 164 aaKnown RBP3.81□□□□□ -1.8
HLA-DPA3-207ENST00000454398 CYCSP99999 105 aaKnown RBP3.81□□□□□ -1.8
HLA-DPA3-207ENST00000454398 C14orf177Q52M58 125 aa3.81□□□□□ -1.8
HLA-DPA3-207ENST00000454398 FAM162BQ5T6X4 162 aa3.81□□□□□ -1.8
HLA-DPA3-207ENST00000454398 RPL7L1Q6DKI1 246 aaKnown RBP3.81□□□□□ -1.8
HLA-DPA3-207ENST00000454398 KRTAP26-1Q6PEX3 210 aa3.81□□□□□ -1.8
HLA-DPA3-207ENST00000454398 NTM-AS1Q6ZSK4 140 aa3.81□□□□□ -1.8
HLA-DPA3-207ENST00000454398 RPL36ALQ969Q0 106 aaKnown RBP3.81□□□□□ -1.8
HLA-DPA3-207ENST00000454398 SFRP2Q96HF1 295 aa3.81□□□□□ -1.8
HLA-DPA3-207ENST00000454398 RPS10P5Q9NQ39 176 aa3.81□□□□□ -1.8
HLA-DPA3-207ENST00000454398 A0A087WYN8 130 aa3.8□□□□□ -1.8
HLA-DPA3-207ENST00000454398 IGKV2-24A0A0C4DH68 120 aa3.8□□□□□ -1.8
HLA-DPA3-207ENST00000454398 FABP5P3A8MUU1 101 aa3.8□□□□□ -1.8
HLA-DPA3-207ENST00000454398 GATCO43716 136 aaKnown RBP3.8□□□□□ -1.8
HLA-DPA3-207ENST00000454398 NDUFS6O75380 124 aaKnown RBP3.8□□□□□ -1.8
HLA-DPA3-207ENST00000454398 SLPIP03973 132 aa3.8□□□□□ -1.8
HLA-DPA3-207ENST00000454398 S100PP25815 95 aa3.8□□□□□ -1.8
HLA-DPA3-207ENST00000454398 Q0VG73 95 aa3.8□□□□□ -1.8
HLA-DPA3-207ENST00000454398 FABP9Q0Z7S8 132 aa3.8□□□□□ -1.8
HLA-DPA3-207ENST00000454398 ELOBQ15370 118 aa3.8□□□□□ -1.8
HLA-DPA3-207ENST00000454398 SAPCD1Q5SSQ6 148 aa3.8□□□□□ -1.8
HLA-DPA3-207ENST00000454398 SDIM1Q6ZPB5 146 aa3.8□□□□□ -1.8
HLA-DPA3-207ENST00000454398 C9orf163Q8N9P6 203 aa3.8□□□□□ -1.8
HLA-DPA3-207ENST00000454398 HIST1H2BAQ96A08 127 aa3.8□□□□□ -1.8
HLA-DPA3-207ENST00000454398 CHCHD7Q9BUK0 85 aa3.8□□□□□ -1.8
HLA-DPA3-207ENST00000454398 SEC11CQ9BY50 192 aa3.8□□□□□ -1.8
HLA-DPA3-207ENST00000454398 ACTR3CQ9C0K3 210 aaPredicted RBP3.8□□□□□ -1.8
HLA-DPA3-207ENST00000454398 TMEM167BQ9NRX6 74 aa3.8□□□□□ -1.8
HLA-DPA3-207ENST00000454398 KIF25-AS1Q9Y6Z4 181 aa3.8□□□□□ -1.8
HLA-DPA3-207ENST00000454398 IGKV3OR2-268A0A0C4DH90 116 aa3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 TRBV10-1A0A0K0K1A3 114 aa3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 A0A1W2PRE2 83 aa3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 MAP1LC3B2A6NCE7 125 aa3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 F5H697 171 aa3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 MGPP08493 103 aa3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 SEC11BP0C7V7 166 aa3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 FHITP49789 147 aa3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 UBE2G1P62253 170 aa3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 EIF5AP63241 154 aaKnown RBP3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 MIAQ16674 131 aa3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 LINC01559Q495D7 138 aa3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 HIGD2BQ4VC39 106 aa3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 PIK3CD-AS1Q5SR53 167 aa3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 C10orf91Q5T1B1 145 aa3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 PRR27Q6MZM9 219 aa3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 OR10G8Q8NGN5 311 aa3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 SPACA4Q8TDM5 124 aa3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 PSMG3Q9BT73 122 aaPredicted RBP3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 TPPP3Q9BW30 176 aa3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 MAP1LC3BQ9GZQ8 125 aa3.79□□□□□ -1.8
HLA-DPA3-207ENST00000454398 IGLV4-60A0A075B6I1 120 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms