RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 ADCYAP1P18509 176 aa19.08■□□□□ 0.64
SMARCC1-203ENST00000454240 TTC32Q5I0X7 151 aa19.08■□□□□ 0.64
SMARCC1-203ENST00000454240 TRAV8-6A0A0B4J262 113 aa19.06■□□□□ 0.64
SMARCC1-203ENST00000454240 PPP1R2P9O14990 202 aa19.06■□□□□ 0.64
SMARCC1-203ENST00000454240 DNAH10OSP0CZ25 163 aa19.06■□□□□ 0.64
SMARCC1-203ENST00000454240 OR10J3Q5JRS4 329 aa19.06■□□□□ 0.64
SMARCC1-203ENST00000454240 A0A087WWC5 75 aa19.05■□□□□ 0.64
SMARCC1-203ENST00000454240 RIGQ13278 110 aa19.05■□□□□ 0.64
SMARCC1-203ENST00000454240 DNAJC30Q96LL9 226 aa19.05■□□□□ 0.64
SMARCC1-203ENST00000454240 F8W036 122 aa19.04■□□□□ 0.64
SMARCC1-203ENST00000454240 C1orf134Q5TEV5 83 aa19.04■□□□□ 0.64
SMARCC1-203ENST00000454240 RASL11AQ6T310 242 aa19.04■□□□□ 0.64
SMARCC1-203ENST00000454240 TMEM191AQ9H0A3 160 aa19.04■□□□□ 0.64
SMARCC1-203ENST00000454240 IGHV3-38A0A0C4DH36 116 aa19.03■□□□□ 0.64
SMARCC1-203ENST00000454240 RTL8CO15255 209 aa19.02■□□□□ 0.64
SMARCC1-203ENST00000454240 GATD1Q8NB37 220 aa19.02■□□□□ 0.64
SMARCC1-203ENST00000454240 ANAPC16Q96DE5 110 aa19.02■□□□□ 0.64
SMARCC1-203ENST00000454240 SEC11CQ9BY50 192 aa19.02■□□□□ 0.64
SMARCC1-203ENST00000454240 NIT2Q9NQR4 276 aa19.02■□□□□ 0.64
SMARCC1-203ENST00000454240 TNFRSF18Q9Y5U5 241 aa19.02■□□□□ 0.64
SMARCC1-203ENST00000454240 MT-ND4LP03901 98 aa19.01■□□□□ 0.63
SMARCC1-203ENST00000454240 DNAH17Q9UFH2 4485 aa19.01■□□□□ 0.63
SMARCC1-203ENST00000454240 K7EP13 123 aa19■□□□□ 0.63
SMARCC1-203ENST00000454240 LINC01556Q5JQF7 62 aa19■□□□□ 0.63
SMARCC1-203ENST00000454240 DAZ4Q86SG3 579 aaKnown RBP19■□□□□ 0.63
SMARCC1-203ENST00000454240 C6orf223Q8N319 242 aa19■□□□□ 0.63
SMARCC1-203ENST00000454240 DAZ3Q9NR90 486 aaKnown RBP19■□□□□ 0.63
SMARCC1-203ENST00000454240 TRAV9-2A0A087WT02 112 aa18.99■□□□□ 0.63
SMARCC1-203ENST00000454240 TRAV26-2A0A0B4J265 109 aa18.99■□□□□ 0.63
SMARCC1-203ENST00000454240 BTF3P20290 206 aaKnown RBP18.99■□□□□ 0.63
SMARCC1-203ENST00000454240 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.99■□□□□ 0.63
SMARCC1-203ENST00000454240 FRZBQ92765 325 aa18.99■□□□□ 0.63
SMARCC1-203ENST00000454240 FAT2Q9NYQ8 4349 aa18.98■□□□□ 0.63
SMARCC1-203ENST00000454240 LINC00336Q6ZUF6 198 aa18.97■□□□□ 0.63
SMARCC1-203ENST00000454240 RNF185Q96GF1 192 aa18.97■□□□□ 0.63
SMARCC1-203ENST00000454240 TRBV6-8A0A0A6YYG3 113 aa18.96■□□□□ 0.63
SMARCC1-203ENST00000454240 A0A1B0GW15 77 aa18.96■□□□□ 0.63
SMARCC1-203ENST00000454240 RAB4AP20338 218 aa18.96■□□□□ 0.63
SMARCC1-203ENST00000454240 C10orf91Q5T1B1 145 aa18.96■□□□□ 0.63
SMARCC1-203ENST00000454240 AMN1Q8IY45 258 aa18.95■□□□□ 0.62
SMARCC1-203ENST00000454240 TMEM97Q5BJF2 176 aa18.94■□□□□ 0.62
SMARCC1-203ENST00000454240 NTM-AS1Q6ZSK4 140 aa18.94■□□□□ 0.62
SMARCC1-203ENST00000454240 A0A1B0GXF2 115 aa18.93■□□□□ 0.62
SMARCC1-203ENST00000454240 CAMPP49913 170 aa18.93■□□□□ 0.62
SMARCC1-203ENST00000454240 C10orf126Q8N4M7 172 aa18.93■□□□□ 0.62
SMARCC1-203ENST00000454240 RPL39LQ96EH5 51 aaKnown RBP18.93■□□□□ 0.62
SMARCC1-203ENST00000454240 MRPL54Q6P161 138 aaKnown RBP18.92■□□□□ 0.62
SMARCC1-203ENST00000454240 NIT1Q86X76 327 aa18.92■□□□□ 0.62
SMARCC1-203ENST00000454240 IGHV3-30P01768 117 aa18.91■□□□□ 0.62
SMARCC1-203ENST00000454240 IGHV3-33P01772 117 aa18.91■□□□□ 0.62
SMARCC1-203ENST00000454240 IGHV3-30-3P0DP02 117 aa18.91■□□□□ 0.62
SMARCC1-203ENST00000454240 IGHV3-30-5P0DP03 117 aa18.91■□□□□ 0.62
SMARCC1-203ENST00000454240 MRAP2Q96G30 205 aa18.91■□□□□ 0.62
SMARCC1-203ENST00000454240 CARHSP1Q9Y2V2 147 aaKnown RBP18.91■□□□□ 0.62
SMARCC1-203ENST00000454240 GAS8-AS1O95177 125 aa18.9■□□□□ 0.62
SMARCC1-203ENST00000454240 HBBP68871 147 aa18.9■□□□□ 0.62
SMARCC1-203ENST00000454240 FAM104BQ5XKR9 115 aa18.9■□□□□ 0.62
SMARCC1-203ENST00000454240 ATP5L2Q7Z4Y8 100 aa18.9■□□□□ 0.62
SMARCC1-203ENST00000454240 Q8N3U1 123 aa18.9■□□□□ 0.62
SMARCC1-203ENST00000454240 PRSS29PA6NIE9 313 aa18.89■□□□□ 0.61
SMARCC1-203ENST00000454240 S100A8P05109 93 aa18.89■□□□□ 0.61
SMARCC1-203ENST00000454240 CTDSP1Q9GZU7 261 aa18.89■□□□□ 0.61
SMARCC1-203ENST00000454240 EPPK1P58107 5090 aaKnown RBP18.89■□□□□ 0.61
SMARCC1-203ENST00000454240 TRBV6-5A0A0K0K1A5 114 aa18.88■□□□□ 0.61
SMARCC1-203ENST00000454240 IBA57-AS1B1ANH7 110 aa18.88■□□□□ 0.61
SMARCC1-203ENST00000454240 IQCJQ1A5X6 159 aa18.87■□□□□ 0.61
SMARCC1-203ENST00000454240 KCNIP4Q6PIL6 250 aa18.87■□□□□ 0.61
SMARCC1-203ENST00000454240 IMMP2LQ96T52 175 aa18.87■□□□□ 0.61
SMARCC1-203ENST00000454240 TRBV25-1A0A075B6N4 114 aa18.86■□□□□ 0.61
SMARCC1-203ENST00000454240 MRPL51Q4U2R6 128 aaKnown RBP18.86■□□□□ 0.61
SMARCC1-203ENST00000454240 Q6ZRN7 208 aaPredicted RBP18.86■□□□□ 0.61
SMARCC1-203ENST00000454240 CHCHD7Q9BUK0 85 aa18.86■□□□□ 0.61
SMARCC1-203ENST00000454240 RPS10P46783 165 aaKnown RBP18.85■□□□□ 0.61
SMARCC1-203ENST00000454240 NFE4Q86UQ8 179 aa18.85■□□□□ 0.61
SMARCC1-203ENST00000454240 URGCP-MRPS24S4R325 110 aa18.85■□□□□ 0.61
SMARCC1-203ENST00000454240 IGHV1-24A0A0C4DH33 117 aa18.84■□□□□ 0.61
SMARCC1-203ENST00000454240 SDHAF1A6NFY7 115 aa18.84■□□□□ 0.61
SMARCC1-203ENST00000454240 SMKR1H3BMG3 65 aa18.83■□□□□ 0.6
SMARCC1-203ENST00000454240 BTF3L4Q96K17 158 aa18.83■□□□□ 0.6
SMARCC1-203ENST00000454240 CHCHD5Q9BSY4 110 aa18.83■□□□□ 0.6
SMARCC1-203ENST00000454240 A0A087WX48 190 aa18.82■□□□□ 0.6
SMARCC1-203ENST00000454240 NCR2O95944 276 aa18.82■□□□□ 0.6
SMARCC1-203ENST00000454240 TNP2Q05952 138 aa18.82■□□□□ 0.6
SMARCC1-203ENST00000454240 COTL1Q14019 142 aa18.82■□□□□ 0.6
SMARCC1-203ENST00000454240 LAGE3Q14657 143 aa18.82■□□□□ 0.6
SMARCC1-203ENST00000454240 NRACQ8N912 160 aa18.82■□□□□ 0.6
SMARCC1-203ENST00000454240 ST20Q9HBF5 79 aa18.82■□□□□ 0.6
SMARCC1-203ENST00000454240 TMEM242Q9NWH2 141 aa18.82■□□□□ 0.6
SMARCC1-203ENST00000454240 PKD1P98161 4303 aa18.81■□□□□ 0.6
SMARCC1-203ENST00000454240 C7orf77A4D0Y5 90 aa18.81■□□□□ 0.6
SMARCC1-203ENST00000454240 TMEM262E9PQX1 116 aa18.81■□□□□ 0.6
SMARCC1-203ENST00000454240 CLRN3Q8NCR9 226 aa18.81■□□□□ 0.6
SMARCC1-203ENST00000454240 DEFB104AQ8WTQ1 72 aa18.81■□□□□ 0.6
SMARCC1-203ENST00000454240 A0A1B0GVY2 172 aa18.8■□□□□ 0.6
SMARCC1-203ENST00000454240 PPP1R17O96001 155 aa18.8■□□□□ 0.6
SMARCC1-203ENST00000454240 POLR2KP53803 58 aaKnown RBP18.8■□□□□ 0.6
SMARCC1-203ENST00000454240 PKIAP61925 76 aa18.8■□□□□ 0.6
SMARCC1-203ENST00000454240 TMEM70Q9BUB7 260 aa18.8■□□□□ 0.6
SMARCC1-203ENST00000454240 HECTD4Q9Y4D8 3996 aa18.8■□□□□ 0.6
SMARCC1-203ENST00000454240 RHEBQ15382 184 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms