RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 DUX3Q96PT4 197 aa16.34■□□□□ 0.21
TTC3-210ENST00000450533 TLN2Q9Y4G6 2542 aa16.34■□□□□ 0.21
TTC3-210ENST00000450533 IGHV3-73A0A0B4J1V6 119 aa16.33■□□□□ 0.2
TTC3-210ENST00000450533 TSPEAR-AS2P59090 65 aa16.33■□□□□ 0.2
TTC3-210ENST00000450533 HERVK_113P61574 105 aa16.33■□□□□ 0.2
TTC3-210ENST00000450533 TRPT1Q86TN4 253 aaKnown RBP16.33■□□□□ 0.2
TTC3-210ENST00000450533 A0A1B0GWB2 263 aa16.33■□□□□ 0.2
TTC3-210ENST00000450533 LINC01549A6NIU2 74 aa16.33■□□□□ 0.2
TTC3-210ENST00000450533 FSHBP01225 129 aa16.33■□□□□ 0.2
TTC3-210ENST00000450533 DEFB131AP59861 70 aa16.33■□□□□ 0.2
TTC3-210ENST00000450533 PAPPA-AS1Q5QFB9 102 aa16.33■□□□□ 0.2
TTC3-210ENST00000450533 P0DMU3 169 aa16.32■□□□□ 0.2
TTC3-210ENST00000450533 FAM231AP0DMU4 169 aa16.32■□□□□ 0.2
TTC3-210ENST00000450533 FAM231CP0DMU5 169 aa16.32■□□□□ 0.2
TTC3-210ENST00000450533 MTURNQ8N3F0 131 aa16.32■□□□□ 0.2
TTC3-210ENST00000450533 CR1P17927 2039 aa16.32■□□□□ 0.2
TTC3-210ENST00000450533 TEX48A0A1B0GUV7 120 aa16.31■□□□□ 0.2
TTC3-210ENST00000450533 WFDC2Q14508 124 aa16.31■□□□□ 0.2
TTC3-210ENST00000450533 BBC3Q96PG8 261 aaPredicted RBP16.3■□□□□ 0.2
TTC3-210ENST00000450533 PGPEP1Q9NXJ5 209 aa16.3■□□□□ 0.2
TTC3-210ENST00000450533 TRGV11A0A075B6L2 103 aa16.29■□□□□ 0.2
TTC3-210ENST00000450533 NSUN5P1Q3KNT7 163 aa16.29■□□□□ 0.2
TTC3-210ENST00000450533 ZNF469Q96JG9 3925 aaPredicted RBP16.29■□□□□ 0.2
TTC3-210ENST00000450533 UBR5O95071 2799 aaPredicted RBP16.29■□□□□ 0.2
TTC3-210ENST00000450533 PROK1P58294 105 aa16.29■□□□□ 0.2
TTC3-210ENST00000450533 A0A0J9YY99 117 aa16.28■□□□□ 0.2
TTC3-210ENST00000450533 SFTA2Q6UW10 78 aa16.28■□□□□ 0.2
TTC3-210ENST00000450533 KHDC1LQ5JSQ8 128 aa16.28■□□□□ 0.2
TTC3-210ENST00000450533 MRPL16Q9NX20 251 aaKnown RBP16.28■□□□□ 0.2
TTC3-210ENST00000450533 I3L3M4 83 aa16.27■□□□□ 0.2
TTC3-210ENST00000450533 RHOHQ15669 191 aa16.27■□□□□ 0.2
TTC3-210ENST00000450533 RNF152Q8N8N0 203 aa16.27■□□□□ 0.2
TTC3-210ENST00000450533 C20orf203Q8NBC4 194 aa16.27■□□□□ 0.2
TTC3-210ENST00000450533 RBMY1BA6NDE4 496 aaKnown RBP16.27■□□□□ 0.19
TTC3-210ENST00000450533 RBMY1EA6NEQ0 496 aaKnown RBP16.27■□□□□ 0.19
TTC3-210ENST00000450533 RBMY1DP0C7P1 496 aaKnown RBP16.27■□□□□ 0.19
TTC3-210ENST00000450533 CUBNO60494 3623 aa16.27■□□□□ 0.19
TTC3-210ENST00000450533 APOMO95445 188 aa16.26■□□□□ 0.19
TTC3-210ENST00000450533 TMEM61Q8N0U2 210 aa16.26■□□□□ 0.19
TTC3-210ENST00000450533 IGHV3-64A0A075B6Q5 118 aa16.25■□□□□ 0.19
TTC3-210ENST00000450533 TMEM238LA0A1B0GVL6 79 aa16.25■□□□□ 0.19
TTC3-210ENST00000450533 A6NJY4 79 aa16.25■□□□□ 0.19
TTC3-210ENST00000450533 F8W1H4 67 aa16.25■□□□□ 0.19
TTC3-210ENST00000450533 H3BMM0 161 aa16.25■□□□□ 0.19
TTC3-210ENST00000450533 Q5PR19 223 aa16.25■□□□□ 0.19
TTC3-210ENST00000450533 EPG5Q9HCE0 2579 aa16.24■□□□□ 0.19
TTC3-210ENST00000450533 SONP18583 2426 aaKnown RBP16.24■□□□□ 0.19
TTC3-210ENST00000450533 J3QQQ9 107 aa16.24■□□□□ 0.19
TTC3-210ENST00000450533 SH2D6Q7Z4S9 175 aa16.24■□□□□ 0.19
TTC3-210ENST00000450533 UBE2D1P51668 147 aa16.24■□□□□ 0.19
TTC3-210ENST00000450533 Q9UF83 564 aa16.24■□□□□ 0.19
TTC3-210ENST00000450533 AMELXQ99217 191 aa16.23■□□□□ 0.19
TTC3-210ENST00000450533 COTL1Q14019 142 aa16.23■□□□□ 0.19
TTC3-210ENST00000450533 LGALS3P17931 250 aaKnown RBP16.22■□□□□ 0.19
TTC3-210ENST00000450533 ETDBQ3ZM63 59 aa16.22■□□□□ 0.19
TTC3-210ENST00000450533 GAGE13Q4V321 117 aa16.22■□□□□ 0.19
TTC3-210ENST00000450533 NFE4Q86UQ8 179 aa16.22■□□□□ 0.19
TTC3-210ENST00000450533 SPANXB1Q9NS25 103 aaPredicted RBP16.22■□□□□ 0.19
TTC3-210ENST00000450533 IGLV4-3A0A075B6K6 122 aa16.22■□□□□ 0.19
TTC3-210ENST00000450533 A0A0J9YXV3 536 aa16.22■□□□□ 0.19
TTC3-210ENST00000450533 CHD6Q8TD26 2715 aa16.22■□□□□ 0.19
TTC3-210ENST00000450533 TSPAN13O95857 204 aa16.21■□□□□ 0.19
TTC3-210ENST00000450533 CEMP1Q6PRD7 247 aaPredicted RBP16.21■□□□□ 0.18
TTC3-210ENST00000450533 DLX4Q92988 240 aaPredicted RBP16.21■□□□□ 0.18
TTC3-210ENST00000450533 Q96MF0 132 aa16.21■□□□□ 0.18
TTC3-210ENST00000450533 VCX2Q9H322 139 aa16.21■□□□□ 0.18
TTC3-210ENST00000450533 LOC107984156A0A0G2JMH3 177 aa16.2■□□□□ 0.18
TTC3-210ENST00000450533 PRRC2AP48634 2157 aaKnown RBP16.2■□□□□ 0.18
TTC3-210ENST00000450533 DEFB113Q30KQ7 82 aa16.2■□□□□ 0.18
TTC3-210ENST00000450533 ARL17AQ8IVW1 177 aa16.2■□□□□ 0.18
TTC3-210ENST00000450533 SLC25A29Q8N8R3 303 aa16.2■□□□□ 0.18
TTC3-210ENST00000450533 SPAG8Q99932 426 aaPredicted RBP16.2■□□□□ 0.18
TTC3-210ENST00000450533 AKAP9Q99996 3911 aa16.2■□□□□ 0.18
TTC3-210ENST00000450533 TMEM223A0PJW6 202 aa16.2■□□□□ 0.18
TTC3-210ENST00000450533 IGHV3-30P01768 117 aa16.2■□□□□ 0.18
TTC3-210ENST00000450533 IGHV3-30-5P0DP03 117 aa16.2■□□□□ 0.18
TTC3-210ENST00000450533 ZNF22P17026 224 aaPredicted RBP16.19■□□□□ 0.18
TTC3-210ENST00000450533 Q6ZSN1 163 aa16.19■□□□□ 0.18
TTC3-210ENST00000450533 PRO0461Q9UI25 63 aa16.19■□□□□ 0.18
TTC3-210ENST00000450533 NACAE9PAV3 2078 aa16.18■□□□□ 0.18
TTC3-210ENST00000450533 RNASE13Q5GAN3 156 aaKnown RBP16.18■□□□□ 0.18
TTC3-210ENST00000450533 NDUFA11Q86Y39 141 aa16.18■□□□□ 0.18
TTC3-210ENST00000450533 MAP6D1Q9H9H5 199 aa16.18■□□□□ 0.18
TTC3-210ENST00000450533 PEMTQ9UBM1 199 aa16.18■□□□□ 0.18
TTC3-210ENST00000450533 NF1P21359 2839 aa16.18■□□□□ 0.18
TTC3-210ENST00000450533 APCP25054 2843 aa16.18■□□□□ 0.18
TTC3-210ENST00000450533 RHODO00212 210 aa16.18■□□□□ 0.18
TTC3-210ENST00000450533 Q8N2B8 174 aa16.18■□□□□ 0.18
TTC3-210ENST00000450533 DYNLRB2Q8TF09 96 aa16.18■□□□□ 0.18
TTC3-210ENST00000450533 WNK1Q9H4A3 2382 aa16.18■□□□□ 0.18
TTC3-210ENST00000450533 CD28P10747 220 aa16.17■□□□□ 0.18
TTC3-210ENST00000450533 TNFRSF18Q9Y5U5 241 aa16.17■□□□□ 0.18
TTC3-210ENST00000450533 NBPF19A0A087WUL8 3843 aa16.17■□□□□ 0.18
TTC3-210ENST00000450533 M0R2P5 195 aa16.17■□□□□ 0.18
TTC3-210ENST00000450533 C4orf3Q8WVX3 66 aa16.17■□□□□ 0.18
TTC3-210ENST00000450533 A8MTW9 85 aa16.16■□□□□ 0.18
TTC3-210ENST00000450533 LEPROTO15243 131 aa16.16■□□□□ 0.18
TTC3-210ENST00000450533 CFC1BP0CG36 223 aa16.16■□□□□ 0.18
TTC3-210ENST00000450533 CFC1P0CG37 223 aa16.16■□□□□ 0.18
TTC3-210ENST00000450533 ZNF843Q8N446 348 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms