RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 RBFOX3A6NFN3 312 aa10.14□□□□□ -0.79
CHD3-205ENST00000449744 IGLV2-8P01709 118 aa10.14□□□□□ -0.79
CHD3-205ENST00000449744 BCL2P10415 239 aa10.14□□□□□ -0.79
CHD3-205ENST00000449744 FRZBQ92765 325 aa10.14□□□□□ -0.79
CHD3-205ENST00000449744 UBE2WQ96B02 151 aa10.14□□□□□ -0.79
CHD3-205ENST00000449744 BIN3Q9NQY0 253 aa10.14□□□□□ -0.79
CHD3-205ENST00000449744 VAX2Q9UIW0 290 aa10.14□□□□□ -0.79
CHD3-205ENST00000449744 IGKV2D-24A0A075B6R9 120 aa10.13□□□□□ -0.79
CHD3-205ENST00000449744 LECT2O14960 151 aa10.13□□□□□ -0.79
CHD3-205ENST00000449744 P01737 135 aa10.13□□□□□ -0.79
CHD3-205ENST00000449744 GZMBP10144 247 aa10.13□□□□□ -0.79
CHD3-205ENST00000449744 TAGLN2P37802 199 aaKnown RBP10.13□□□□□ -0.79
CHD3-205ENST00000449744 TMEM70Q9BUB7 260 aa10.13□□□□□ -0.79
CHD3-205ENST00000449744 C19orf71A6NCJ1 209 aa10.12□□□□□ -0.79
CHD3-205ENST00000449744 MGPP08493 103 aa10.12□□□□□ -0.79
CHD3-205ENST00000449744 CACNG7P62955 275 aa10.12□□□□□ -0.79
CHD3-205ENST00000449744 WFDC2Q14508 124 aa10.12□□□□□ -0.79
CHD3-205ENST00000449744 TMEM97Q5BJF2 176 aa10.12□□□□□ -0.79
CHD3-205ENST00000449744 BAALCQ8WXS3 180 aa10.12□□□□□ -0.79
CHD3-205ENST00000449744 IGLC6P0CF74 106 aa10.11□□□□□ -0.79
CHD3-205ENST00000449744 PKIAP61925 76 aa10.11□□□□□ -0.79
CHD3-205ENST00000449744 Q0VG73 95 aa10.11□□□□□ -0.79
CHD3-205ENST00000449744 CHCHD5Q9BSY4 110 aa10.11□□□□□ -0.79
CHD3-205ENST00000449744 KIF25-AS1Q9Y6Z4 181 aa10.11□□□□□ -0.79
CHD3-205ENST00000449744 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.1□□□□□ -0.79
CHD3-205ENST00000449744 F2Z2F3 143 aa10.1□□□□□ -0.79
CHD3-205ENST00000449744 H7C1H1 209 aa10.1□□□□□ -0.79
CHD3-205ENST00000449744 CRPP02741 224 aa10.1□□□□□ -0.79
CHD3-205ENST00000449744 SMR3BP02814 79 aaPredicted RBP10.1□□□□□ -0.79
CHD3-205ENST00000449744 Q5VSD8 79 aa10.1□□□□□ -0.79
CHD3-205ENST00000449744 DNAJC30Q96LL9 226 aa10.1□□□□□ -0.79
CHD3-205ENST00000449744 TRBV20OR9-2A0A075B6H5 130 aa10.09□□□□□ -0.79
CHD3-205ENST00000449744 HAMPP81172 84 aa10.09□□□□□ -0.79
CHD3-205ENST00000449744 C15orf54Q8N8G6 183 aa10.09□□□□□ -0.79
CHD3-205ENST00000449744 Q8N976 141 aa10.09□□□□□ -0.79
CHD3-205ENST00000449744 ANGP03950 147 aaKnown RBP10.08□□□□□ -0.8
CHD3-205ENST00000449744 TRGC1P0CF51 173 aa10.08□□□□□ -0.8
CHD3-205ENST00000449744 MPV17L2Q567V2 206 aa10.08□□□□□ -0.8
CHD3-205ENST00000449744 LYZL1Q6UWQ5 148 aa10.08□□□□□ -0.8
CHD3-205ENST00000449744 C9orf62Q8N4C0 152 aa10.08□□□□□ -0.8
CHD3-205ENST00000449744 C1orf43Q9BWL3 253 aa10.08□□□□□ -0.8
CHD3-205ENST00000449744 TRBV25-1A0A075B6N4 114 aa10.07□□□□□ -0.8
CHD3-205ENST00000449744 FAM229AH3BQW9 127 aa10.07□□□□□ -0.8
CHD3-205ENST00000449744 INAFM2P0DMQ5 153 aa10.07□□□□□ -0.8
CHD3-205ENST00000449744 BLOC1S1P78537 153 aa10.07□□□□□ -0.8
CHD3-205ENST00000449744 ATRAIDQ6UW56 229 aa10.07□□□□□ -0.8
CHD3-205ENST00000449744 NTM-AS1Q6ZSK4 140 aa10.07□□□□□ -0.8
CHD3-205ENST00000449744 NUDT10Q8NFP7 164 aa10.07□□□□□ -0.8
CHD3-205ENST00000449744 NUDT11Q96G61 164 aa10.07□□□□□ -0.8
CHD3-205ENST00000449744 M0QY20 66 aa10.06□□□□□ -0.8
CHD3-205ENST00000449744 SUMO4Q6EEV6 95 aa10.06□□□□□ -0.8
CHD3-205ENST00000449744 ENHOQ6UWT2 76 aa10.06□□□□□ -0.8
CHD3-205ENST00000449744 ALKAL2Q6UX46 152 aa10.06□□□□□ -0.8
CHD3-205ENST00000449744 DPH3P1Q9H4G8 78 aa10.06□□□□□ -0.8
CHD3-205ENST00000449744 FAM30AQ9NZY2 134 aa10.06□□□□□ -0.8
CHD3-205ENST00000449744 IGHV1-24A0A0C4DH33 117 aa10.05□□□□□ -0.8
CHD3-205ENST00000449744 NTF3P20783 257 aa10.05□□□□□ -0.8
CHD3-205ENST00000449744 GAGE6Q13070 117 aa10.05□□□□□ -0.8
CHD3-205ENST00000449744 RASL11AQ6T310 242 aa10.05□□□□□ -0.8
CHD3-205ENST00000449744 RPP21Q9H633 154 aaKnown RBP10.05□□□□□ -0.8
CHD3-205ENST00000449744 NKX2-5P52952 324 aaPredicted RBP10.04□□□□□ -0.8
CHD3-205ENST00000449744 TWIST1Q15672 202 aa10.04□□□□□ -0.8
CHD3-205ENST00000449744 C14orf177Q52M58 125 aa10.04□□□□□ -0.8
CHD3-205ENST00000449744 WDR73Q6P4I2 378 aa10.04□□□□□ -0.8
CHD3-205ENST00000449744 OCC1Q8TAD7 63 aa10.04□□□□□ -0.8
CHD3-205ENST00000449744 RNASE7Q9H1E1 156 aaKnown RBP10.04□□□□□ -0.8
CHD3-205ENST00000449744 CTRLP40313 264 aa10.03□□□□□ -0.8
CHD3-205ENST00000449744 RBX1P62877 108 aa10.03□□□□□ -0.8
CHD3-205ENST00000449744 MIAQ16674 131 aa10.03□□□□□ -0.8
CHD3-205ENST00000449744 IQCJQ1A5X6 159 aa10.03□□□□□ -0.8
CHD3-205ENST00000449744 NIT2Q9NQR4 276 aa10.03□□□□□ -0.8
CHD3-205ENST00000449744 TMEM250H0YL14 139 aa10.02□□□□□ -0.81
CHD3-205ENST00000449744 K7EN84 100 aa10.02□□□□□ -0.81
CHD3-205ENST00000449744 HLA-DQA1P01909 254 aa10.02□□□□□ -0.81
CHD3-205ENST00000449744 LINC01620Q4KN68 170 aa10.02□□□□□ -0.81
CHD3-205ENST00000449744 CLPSL2Q6UWE3 100 aa10.02□□□□□ -0.81
CHD3-205ENST00000449744 FAT1Q14517 4588 aa10.01□□□□□ -0.81
CHD3-205ENST00000449744 CEBPGP53567 150 aa10.01□□□□□ -0.81
CHD3-205ENST00000449744 Q6ZSA8 131 aa10.01□□□□□ -0.81
CHD3-205ENST00000449744 SMIM15Q7Z3B0 74 aa10.01□□□□□ -0.81
CHD3-205ENST00000449744 LINC00269Q8N2A0 174 aa10.01□□□□□ -0.81
CHD3-205ENST00000449744 TMEM243Q9BU79 118 aa10.01□□□□□ -0.81
CHD3-205ENST00000449744 GATCO43716 136 aaKnown RBP10□□□□□ -0.81
CHD3-205ENST00000449744 CNFNQ9BYD5 112 aa10□□□□□ -0.81
CHD3-205ENST00000449744 PRR34Q9NV39 138 aa10□□□□□ -0.81
CHD3-205ENST00000449744 DMBT1Q9UGM3 2413 aaPredicted RBP9.99□□□□□ -0.81
CHD3-205ENST00000449744 LYPD6BQ8NI32 183 aa9.99□□□□□ -0.81
CHD3-205ENST00000449744 PGLYRP4Q96LB8 373 aa9.99□□□□□ -0.81
CHD3-205ENST00000449744 EIF5A2Q9GZV4 153 aaKnown RBP9.99□□□□□ -0.81
CHD3-205ENST00000449744 USP17L23D6RBM5 183 aa9.98□□□□□ -0.81
CHD3-205ENST00000449744 UBE2L6O14933 153 aa9.98□□□□□ -0.81
CHD3-205ENST00000449744 REG3AQ06141 175 aa9.98□□□□□ -0.81
CHD3-205ENST00000449744 COTL1Q14019 142 aa9.98□□□□□ -0.81
CHD3-205ENST00000449744 FAM231DQ6ZW35 169 aa9.98□□□□□ -0.81
CHD3-205ENST00000449744 A8MWL6 223 aa9.97□□□□□ -0.81
CHD3-205ENST00000449744 AMTP48728 403 aa9.97□□□□□ -0.81
CHD3-205ENST00000449744 DEFB104AQ8WTQ1 72 aa9.97□□□□□ -0.81
CHD3-205ENST00000449744 GTSF1Q8WW33 167 aa9.97□□□□□ -0.81
CHD3-205ENST00000449744 BORCS7Q96B45 105 aa9.97□□□□□ -0.81
CHD3-205ENST00000449744 DNAH8Q96JB1 4490 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms